RNA–Protein interactions for RNA: ENST00000488249.1

RBM28-207, Transcript of RNA binding motif protein 28, humanhuman

TSL 3

Gene RBM28, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-207ENST00000488249 ACSM6Q6P461 480 aa3.63□□□□□ -1.83
RBM28-207ENST00000488249 GET4Q7L5D6 327 aaPredicted RBP3.63□□□□□ -1.83
RBM28-207ENST00000488249 TTC30AQ86WT1 665 aa3.63□□□□□ -1.83
RBM28-207ENST00000488249 SKAP1Q86WV1 359 aa3.63□□□□□ -1.83
RBM28-207ENST00000488249 CNGA4Q8IV77 575 aa3.63□□□□□ -1.83
RBM28-207ENST00000488249 C1orf131Q8NDD1 294 aaKnown RBP3.63□□□□□ -1.83
RBM28-207ENST00000488249 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.63□□□□□ -1.83
RBM28-207ENST00000488249 MAP4K1Q92918 833 aa3.63□□□□□ -1.83
RBM28-207ENST00000488249 MPHOSPH6Q99547 160 aaKnown RBP3.63□□□□□ -1.83
RBM28-207ENST00000488249 EIF3CQ99613 913 aaKnown RBP3.63□□□□□ -1.83
RBM28-207ENST00000488249 ARPC5LQ9BPX5 153 aa3.63□□□□□ -1.83
RBM28-207ENST00000488249 RNF26Q9BY78 433 aaPredicted RBP3.63□□□□□ -1.83
RBM28-207ENST00000488249 PRSS22Q9GZN4 317 aa3.63□□□□□ -1.83
RBM28-207ENST00000488249 NUAK2Q9H093 628 aa3.63□□□□□ -1.83
RBM28-207ENST00000488249 EPS8L2Q9H6S3 715 aa3.63□□□□□ -1.83
RBM28-207ENST00000488249 FSCN3Q9NQT6 498 aa3.63□□□□□ -1.83
RBM28-207ENST00000488249 IGSF9Q9P2J2 1179 aa3.63□□□□□ -1.83
RBM28-207ENST00000488249 SCINQ9Y6U3 715 aa3.63□□□□□ -1.83
RBM28-207ENST00000488249 RPGRIP1LQ68CZ1 1315 aa3.63□□□□□ -1.83
RBM28-207ENST00000488249 CCDC187A0A096LP49 1063 aa3.62□□□□□ -1.83
RBM28-207ENST00000488249 GOLGA6L3A6NEY3 463 aa3.62□□□□□ -1.83
RBM28-207ENST00000488249 TTC34A8MYJ7 566 aa3.62□□□□□ -1.83
RBM28-207ENST00000488249 KCNU1A8MYU2 1149 aa3.62□□□□□ -1.83
RBM28-207ENST00000488249 M0QZQ0 153 aa3.62□□□□□ -1.83
RBM28-207ENST00000488249 IFRD1O00458 451 aaPredicted RBP3.62□□□□□ -1.83
RBM28-207ENST00000488249 PCDH17O14917 1159 aa3.62□□□□□ -1.83
RBM28-207ENST00000488249 NPC1O15118 1278 aa3.62□□□□□ -1.83
RBM28-207ENST00000488249 TAF5LO75529 589 aa3.62□□□□□ -1.83
RBM28-207ENST00000488249 ANXA6P08133 673 aa3.62□□□□□ -1.83
RBM28-207ENST00000488249 ALADP13716 330 aa3.62□□□□□ -1.83
RBM28-207ENST00000488249 NPPBP16860 134 aa3.62□□□□□ -1.83
RBM28-207ENST00000488249 ATP5F1P24539 256 aaPredicted RBP3.62□□□□□ -1.83
RBM28-207ENST00000488249 TACR3P29371 465 aa3.62□□□□□ -1.83
RBM28-207ENST00000488249 MAN1A1P33908 653 aa3.62□□□□□ -1.83
RBM28-207ENST00000488249 IL6STP40189 918 aaPredicted RBP3.62□□□□□ -1.83
RBM28-207ENST00000488249 POU5F1Q01860 360 aaKnown RBP3.62□□□□□ -1.83
RBM28-207ENST00000488249 POU5F1BQ06416 359 aa3.62□□□□□ -1.83
RBM28-207ENST00000488249 KPNB1Q14974 876 aaKnown RBP3.62□□□□□ -1.83
RBM28-207ENST00000488249 BRD3Q15059 726 aa3.62□□□□□ -1.83
RBM28-207ENST00000488249 ZRSR2Q15696 482 aaKnown RBP3.62□□□□□ -1.83
RBM28-207ENST00000488249 ELF2Q15723 593 aa3.62□□□□□ -1.83
RBM28-207ENST00000488249 CNGA3Q16281 694 aa3.62□□□□□ -1.83
RBM28-207ENST00000488249 MORN5Q5VZ52 161 aa3.62□□□□□ -1.83
RBM28-207ENST00000488249 SLC2A7Q6PXP3 512 aa3.62□□□□□ -1.83
RBM28-207ENST00000488249 KRT27Q7Z3Y8 459 aa3.62□□□□□ -1.83
RBM28-207ENST00000488249 CREBRFQ8IUR6 639 aa3.62□□□□□ -1.83
RBM28-207ENST00000488249 FTSJ3Q8IY81 847 aaKnown RBP3.62□□□□□ -1.83
RBM28-207ENST00000488249 PDILTQ8N807 584 aa3.62□□□□□ -1.83
RBM28-207ENST00000488249 OR52L2PQ8NGH6 319 aa3.62□□□□□ -1.83
RBM28-207ENST00000488249 GLMPQ8WWB7 406 aa3.62□□□□□ -1.83
RBM28-207ENST00000488249 NEUROD6Q96NK8 337 aa3.62□□□□□ -1.83
RBM28-207ENST00000488249 PRPF18Q99633 342 aaKnown RBP3.62□□□□□ -1.83
RBM28-207ENST00000488249 PAAF1Q9BRP4 392 aa3.62□□□□□ -1.83
RBM28-207ENST00000488249 SLC29A3Q9BZD2 475 aa3.62□□□□□ -1.83
RBM28-207ENST00000488249 WDR12Q9GZL7 423 aaKnown RBP3.62□□□□□ -1.83
RBM28-207ENST00000488249 ZNF70Q9UC06 446 aaPredicted RBP3.62□□□□□ -1.83
RBM28-207ENST00000488249 MAGED2Q9UNF1 606 aaPredicted RBP3.62□□□□□ -1.83
RBM28-207ENST00000488249 BTBD3Q9Y2F9 522 aa3.62□□□□□ -1.83
RBM28-207ENST00000488249 LRCH1Q9Y2L9 728 aa3.62□□□□□ -1.83
RBM28-207ENST00000488249 HEMK1Q9Y5R4 338 aaPredicted RBP3.62□□□□□ -1.83
RBM28-207ENST00000488249 A0A087WV62 115 aa3.61□□□□□ -1.83
RBM28-207ENST00000488249 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.61□□□□□ -1.83
RBM28-207ENST00000488249 ABHD14A-ACY1A0A1B0GW23 586 aa3.61□□□□□ -1.83
RBM28-207ENST00000488249 GXYLT2A0PJZ3 443 aa3.61□□□□□ -1.83
RBM28-207ENST00000488249 C16orf96A6NNT2 1141 aa3.61□□□□□ -1.83
RBM28-207ENST00000488249 PRYO14603 147 aa3.61□□□□□ -1.83
RBM28-207ENST00000488249 TP73O15350 636 aa3.61□□□□□ -1.83
RBM28-207ENST00000488249 FFAR2O15552 330 aa3.61□□□□□ -1.83
RBM28-207ENST00000488249 SLC3A2P08195 630 aaKnown RBP3.61□□□□□ -1.83
RBM28-207ENST00000488249 ITGA5P08648 1049 aa3.61□□□□□ -1.83
RBM28-207ENST00000488249 HOXD12P35452 270 aa3.61□□□□□ -1.83
RBM28-207ENST00000488249 ALDH18A1P54886 795 aaKnown RBP3.61□□□□□ -1.83
RBM28-207ENST00000488249 GHRHRQ02643 423 aa3.61□□□□□ -1.83
RBM28-207ENST00000488249 GAB1Q13480 694 aa3.61□□□□□ -1.83
RBM28-207ENST00000488249 GRM4Q14833 912 aa3.61□□□□□ -1.83
RBM28-207ENST00000488249 FAM110CQ1W6H9 321 aa3.61□□□□□ -1.83
RBM28-207ENST00000488249 CCDC96Q2M329 555 aa3.61□□□□□ -1.83
RBM28-207ENST00000488249 TRIM71Q2Q1W2 868 aaKnown RBP3.61□□□□□ -1.83
RBM28-207ENST00000488249 PGBD2Q6P3X8 592 aa3.61□□□□□ -1.83
RBM28-207ENST00000488249 C16orf89Q6UX73 402 aa3.61□□□□□ -1.83
RBM28-207ENST00000488249 KYAT3Q6YP21 454 aaKnown RBP3.61□□□□□ -1.83
RBM28-207ENST00000488249 SAMD3Q8N6K7 520 aa3.61□□□□□ -1.83
RBM28-207ENST00000488249 SLC22A17Q8WUG5 538 aa3.61□□□□□ -1.83
RBM28-207ENST00000488249 AKAP1Q92667 903 aaKnown RBP eCLIP3.61□□□□□ -1.83
RBM28-207ENST00000488249 P2RY11Q96G91 374 aa3.61□□□□□ -1.83
RBM28-207ENST00000488249 C1QTNF7Q9BXJ2 289 aa3.61□□□□□ -1.83
RBM28-207ENST00000488249 CDCP1Q9H5V8 836 aa3.61□□□□□ -1.83
RBM28-207ENST00000488249 FBXO28Q9NVF7 368 aa3.61□□□□□ -1.83
RBM28-207ENST00000488249 ARL8BQ9NVJ2 186 aa3.61□□□□□ -1.83
RBM28-207ENST00000488249 UBE2J1Q9Y385 318 aaPredicted RBP3.61□□□□□ -1.83
RBM28-207ENST00000488249 SIRT4Q9Y6E7 314 aaPredicted RBP3.61□□□□□ -1.83
RBM28-207ENST00000488249 AQP12BA6NM10 295 aa3.6□□□□□ -1.83
RBM28-207ENST00000488249 E5RJQ4 531 aa3.6□□□□□ -1.83
RBM28-207ENST00000488249 INO80B-WBP1J3KQ70 363 aa3.6□□□□□ -1.83
RBM28-207ENST00000488249 RRHO14718 337 aa3.6□□□□□ -1.83
RBM28-207ENST00000488249 CER1O95813 267 aa3.6□□□□□ -1.83
RBM28-207ENST00000488249 KLRK1P26718 216 aa3.6□□□□□ -1.83
RBM28-207ENST00000488249 NDUFS1P28331 727 aa3.6□□□□□ -1.83
RBM28-207ENST00000488249 VPS41P49754 854 aa3.6□□□□□ -1.83
RBM28-207ENST00000488249 AGTR2P50052 363 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 106.8 ms