RNA–Protein interactions for RNA: ENST00000473879.1

BRAT1-205, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-205ENST00000473879 CNPY3Q9BT09 278 aa13.82□□□□□ -0.2
BRAT1-205ENST00000473879 FOXQ1Q9C009 403 aa13.82□□□□□ -0.2
BRAT1-205ENST00000473879 TRIM7Q9C029 511 aa13.82□□□□□ -0.2
BRAT1-205ENST00000473879 SMG9Q9H0W8 520 aaKnown RBP13.82□□□□□ -0.2
BRAT1-205ENST00000473879 GOLPH3Q9H4A6 298 aa13.82□□□□□ -0.2
BRAT1-205ENST00000473879 POPDC2Q9HBU9 364 aa13.82□□□□□ -0.2
BRAT1-205ENST00000473879 LTB4R2Q9NPC1 389 aa13.82□□□□□ -0.2
BRAT1-205ENST00000473879 THG1LQ9NWX6 298 aaKnown RBP13.82□□□□□ -0.2
BRAT1-205ENST00000473879 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.82□□□□□ -0.2
BRAT1-205ENST00000473879 TRPM5Q9NZQ8 1165 aa13.82□□□□□ -0.2
BRAT1-205ENST00000473879 STAP1Q9ULZ2 295 aa13.82□□□□□ -0.2
BRAT1-205ENST00000473879 MRPS17Q9Y2R5 130 aaKnown RBP13.82□□□□□ -0.2
BRAT1-205ENST00000473879 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.82□□□□□ -0.2
BRAT1-205ENST00000473879 HYOU1Q9Y4L1 999 aa13.82□□□□□ -0.2
BRAT1-205ENST00000473879 USP3Q9Y6I4 520 aa13.82□□□□□ -0.2
BRAT1-205ENST00000473879 TRAV19A0A0A6YYK7 116 aa13.81□□□□□ -0.2
BRAT1-205ENST00000473879 CCDC66A2RUB6 948 aa13.81□□□□□ -0.2
BRAT1-205ENST00000473879 FAM170BA6NMN3 283 aa13.81□□□□□ -0.2
BRAT1-205ENST00000473879 CAPN9O14815 690 aa13.81□□□□□ -0.2
BRAT1-205ENST00000473879 GRAP2O75791 330 aa13.81□□□□□ -0.2
BRAT1-205ENST00000473879 URI1O94763 535 aaPredicted RBP13.81□□□□□ -0.2
BRAT1-205ENST00000473879 LTFP02788 710 aa13.81□□□□□ -0.2
BRAT1-205ENST00000473879 ATP1A1P05023 1023 aaKnown RBP13.81□□□□□ -0.2
BRAT1-205ENST00000473879 DCNP07585 359 aaKnown RBP13.81□□□□□ -0.2
BRAT1-205ENST00000473879 USP17L7P0C7H9 530 aa13.81□□□□□ -0.2
BRAT1-205ENST00000473879 TCP1P17987 556 aaKnown RBP13.81□□□□□ -0.2
BRAT1-205ENST00000473879 MAGEA9P43362 315 aa13.81□□□□□ -0.2
BRAT1-205ENST00000473879 PTPN9P43378 593 aa13.81□□□□□ -0.2
BRAT1-205ENST00000473879 UBXN2BQ14CS0 331 aa13.81□□□□□ -0.2
BRAT1-205ENST00000473879 PAPD7Q5XG87 772 aaKnown RBP13.81□□□□□ -0.2
BRAT1-205ENST00000473879 C1orf228Q6PIY5 440 aa13.81□□□□□ -0.2
BRAT1-205ENST00000473879 BEND5Q7L4P6 421 aa13.81□□□□□ -0.2
BRAT1-205ENST00000473879 BHLHA9Q7RTU4 235 aa13.81□□□□□ -0.2
BRAT1-205ENST00000473879 RXFP2Q8WXD0 754 aa13.81□□□□□ -0.2
BRAT1-205ENST00000473879 OVCA2Q8WZ82 227 aa13.81□□□□□ -0.2
BRAT1-205ENST00000473879 RRN3Q9NYV6 651 aa13.81□□□□□ -0.2
BRAT1-205ENST00000473879 SNX12Q9UMY4 172 aa13.81□□□□□ -0.2
BRAT1-205ENST00000473879 SCML2Q9UQR0 700 aa13.81□□□□□ -0.2
BRAT1-205ENST00000473879 CCL26Q9Y258 94 aa13.81□□□□□ -0.2
BRAT1-205ENST00000473879 MTF2Q9Y483 593 aaPredicted RBP13.81□□□□□ -0.2
BRAT1-205ENST00000473879 SAR1BQ9Y6B6 198 aa13.81□□□□□ -0.2
BRAT1-205ENST00000473879 PIAS3Q9Y6X2 628 aa13.81□□□□□ -0.2
BRAT1-205ENST00000473879 USP34Q70CQ2 3546 aa13.81□□□□□ -0.2
BRAT1-205ENST00000473879 PIEZO1Q92508 2521 aa13.8□□□□□ -0.2
BRAT1-205ENST00000473879 C2orf78A6NCI8 922 aa13.8□□□□□ -0.2
BRAT1-205ENST00000473879 ZNF840PA6NDX5 716 aa13.8□□□□□ -0.2
BRAT1-205ENST00000473879 FANCGO15287 622 aa13.8□□□□□ -0.2
BRAT1-205ENST00000473879 NCAM2O15394 837 aa13.8□□□□□ -0.2
BRAT1-205ENST00000473879 PSTPIP1O43586 416 aa13.8□□□□□ -0.2
BRAT1-205ENST00000473879 TCF3P15923 654 aa13.8□□□□□ -0.2
BRAT1-205ENST00000473879 PRLRP16471 622 aa13.8□□□□□ -0.2
BRAT1-205ENST00000473879 HDCP19113 662 aa13.8□□□□□ -0.2
BRAT1-205ENST00000473879 CD72P21854 359 aa13.8□□□□□ -0.2
BRAT1-205ENST00000473879 CTNNA2P26232 953 aa13.8□□□□□ -0.2
BRAT1-205ENST00000473879 TARSP26639 723 aaKnown RBP13.8□□□□□ -0.2
BRAT1-205ENST00000473879 YWHAQP27348 245 aa13.8□□□□□ -0.2
BRAT1-205ENST00000473879 CTNNA1P35221 906 aaKnown RBP13.8□□□□□ -0.2
BRAT1-205ENST00000473879 NOS2P35228 1153 aa13.8□□□□□ -0.2
BRAT1-205ENST00000473879 FLT3P36888 993 aa13.8□□□□□ -0.2
BRAT1-205ENST00000473879 MATKP42679 507 aa13.8□□□□□ -0.2
BRAT1-205ENST00000473879 OGDHQ02218 1023 aa13.8□□□□□ -0.2
BRAT1-205ENST00000473879 ZNF252P-AS1Q0IIN9 211 aa13.8□□□□□ -0.2
BRAT1-205ENST00000473879 IFRD2Q12894 506 aaPredicted RBP13.8□□□□□ -0.2
BRAT1-205ENST00000473879 TAF10Q12962 218 aa13.8□□□□□ -0.2
BRAT1-205ENST00000473879 TAF5Q15542 800 aa13.8□□□□□ -0.2
BRAT1-205ENST00000473879 HADHQ16836 314 aaKnown RBP13.8□□□□□ -0.2
BRAT1-205ENST00000473879 RHOT1Q8IXI2 618 aa13.8□□□□□ -0.2
BRAT1-205ENST00000473879 ARL14EPQ8N8R7 260 aaPredicted RBP13.8□□□□□ -0.2
BRAT1-205ENST00000473879 PDZD8Q8NEN9 1154 aa13.8□□□□□ -0.2
BRAT1-205ENST00000473879 SCAMP5Q8TAC9 235 aa13.8□□□□□ -0.2
BRAT1-205ENST00000473879 FAM3CQ92520 227 aa13.8□□□□□ -0.2
BRAT1-205ENST00000473879 CLDN23Q96B33 292 aa13.8□□□□□ -0.2
BRAT1-205ENST00000473879 HES6Q96HZ4 224 aa13.8□□□□□ -0.2
BRAT1-205ENST00000473879 SLITRK1Q96PX8 696 aa13.8□□□□□ -0.2
BRAT1-205ENST00000473879 SLC2A13Q96QE2 648 aa13.8□□□□□ -0.2
BRAT1-205ENST00000473879 SLC22A12Q96S37 553 aa13.8□□□□□ -0.2
BRAT1-205ENST00000473879 CYP2S1Q96SQ9 504 aa13.8□□□□□ -0.2
BRAT1-205ENST00000473879 FAM83CQ9BQN1 747 aa13.8□□□□□ -0.2
BRAT1-205ENST00000473879 TLR10Q9BXR5 811 aa13.8□□□□□ -0.2
BRAT1-205ENST00000473879 C8orf33Q9H7E9 229 aaPredicted RBP13.8□□□□□ -0.2
BRAT1-205ENST00000473879 TRPC7Q9HCX4 862 aa13.8□□□□□ -0.2
BRAT1-205ENST00000473879 DMDP11532 3685 aa13.8□□□□□ -0.2
BRAT1-205ENST00000473879 YJEFN3A6XGL0 299 aa13.79□□□□□ -0.2
BRAT1-205ENST00000473879 E7ENQ6 273 aa13.79□□□□□ -0.2
BRAT1-205ENST00000473879 H0Y858 1186 aa13.79□□□□□ -0.2
BRAT1-205ENST00000473879 CES2O00748 559 aa13.79□□□□□ -0.2
BRAT1-205ENST00000473879 OAS1P00973 400 aaKnown RBP13.79□□□□□ -0.2
BRAT1-205ENST00000473879 CKMP06732 381 aa13.79□□□□□ -0.2
BRAT1-205ENST00000473879 HOXD11P31277 338 aaPredicted RBP13.79□□□□□ -0.2
BRAT1-205ENST00000473879 PCK1P35558 622 aa13.79□□□□□ -0.2
BRAT1-205ENST00000473879 SSR1P43307 286 aaKnown RBP13.79□□□□□ -0.2
BRAT1-205ENST00000473879 RPS9P46781 194 aaKnown RBP13.79□□□□□ -0.2
BRAT1-205ENST00000473879 PSEN1P49768 467 aa13.79□□□□□ -0.2
BRAT1-205ENST00000473879 TUBP50607 506 aa13.79□□□□□ -0.2
BRAT1-205ENST00000473879 YWHAGP61981 247 aaKnown RBP eCLIP13.79□□□□□ -0.2
BRAT1-205ENST00000473879 LRRC38Q5VT99 294 aa13.79□□□□□ -0.2
BRAT1-205ENST00000473879 CC2D1AQ6P1N0 951 aaPredicted RBP13.79□□□□□ -0.2
BRAT1-205ENST00000473879 STRADAQ7RTN6 431 aa13.79□□□□□ -0.2
BRAT1-205ENST00000473879 DEFB106AQ8N104 65 aa13.79□□□□□ -0.2
BRAT1-205ENST00000473879 ZNF687Q8N1G0 1237 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms