RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 C22orf31O95567 290 aa12.72□□□□□ -0.37
USP11-206ENST00000469080 BAG2O95816 211 aa12.72□□□□□ -0.37
USP11-206ENST00000469080 SNAI1O95863 264 aaPredicted RBP12.72□□□□□ -0.37
USP11-206ENST00000469080 ANXA13P27216 316 aa12.72□□□□□ -0.37
USP11-206ENST00000469080 GNL1P36915 607 aaPredicted RBP12.72□□□□□ -0.37
USP11-206ENST00000469080 PTGIRP43119 386 aa12.72□□□□□ -0.37
USP11-206ENST00000469080 AFF1P51825 1210 aaKnown RBP12.72□□□□□ -0.37
USP11-206ENST00000469080 ZBTB16Q05516 673 aa12.72□□□□□ -0.37
USP11-206ENST00000469080 RWDD4Q6NW29 188 aaKnown RBP12.72□□□□□ -0.37
USP11-206ENST00000469080 FAM183BPQ6ZVS7 135 aa12.72□□□□□ -0.37
USP11-206ENST00000469080 PPP1R14CQ8TAE6 165 aa12.72□□□□□ -0.37
USP11-206ENST00000469080 AGR3Q8TD06 166 aa12.72□□□□□ -0.37
USP11-206ENST00000469080 SPOCK2Q92563 424 aa12.72□□□□□ -0.37
USP11-206ENST00000469080 ZNF184Q99676 751 aaPredicted RBP12.72□□□□□ -0.37
USP11-206ENST00000469080 SYT11Q9BT88 431 aa12.72□□□□□ -0.37
USP11-206ENST00000469080 TMEM59LQ9UK28 342 aa12.72□□□□□ -0.37
USP11-206ENST00000469080 LZTS1Q9Y250 596 aa12.72□□□□□ -0.37
USP11-206ENST00000469080 GOLGA8CPA6NN73 597 aa12.72□□□□□ -0.37
USP11-206ENST00000469080 TXNDC9O14530 226 aa12.72□□□□□ -0.37
USP11-206ENST00000469080 KDM1AO60341 852 aa12.72□□□□□ -0.37
USP11-206ENST00000469080 SLC4A1P02730 911 aa12.72□□□□□ -0.37
USP11-206ENST00000469080 ELNP15502 786 aa12.72□□□□□ -0.37
USP11-206ENST00000469080 GTF2A2P52657 109 aa12.72□□□□□ -0.37
USP11-206ENST00000469080 MAP3K7CLP57077 242 aa12.72□□□□□ -0.37
USP11-206ENST00000469080 BTKQ06187 659 aa12.72□□□□□ -0.37
USP11-206ENST00000469080 SPARCL1Q14515 664 aa12.72□□□□□ -0.37
USP11-206ENST00000469080 METTL21CQ5VZV1 264 aa12.72□□□□□ -0.37
USP11-206ENST00000469080 PMF1Q6P1K2 205 aa12.72□□□□□ -0.37
USP11-206ENST00000469080 PYROXD2Q8N2H3 581 aa12.72□□□□□ -0.37
USP11-206ENST00000469080 BEST2Q8NFU1 509 aa12.72□□□□□ -0.37
USP11-206ENST00000469080 CYTH2Q99418 400 aa12.72□□□□□ -0.37
USP11-206ENST00000469080 HEPHQ9BQS7 1158 aa12.72□□□□□ -0.37
USP11-206ENST00000469080 UNKQ9C0B0 810 aaKnown RBP12.72□□□□□ -0.37
USP11-206ENST00000469080 RETREG1Q9H6L5 497 aa12.72□□□□□ -0.37
USP11-206ENST00000469080 SMIM10L2AP0DMW4 78 aa12.72□□□□□ -0.37
USP11-206ENST00000469080 SMIM10L2BP0DMW5 78 aa12.72□□□□□ -0.37
USP11-206ENST00000469080 CDK4P11802 303 aa12.72□□□□□ -0.37
USP11-206ENST00000469080 TKTP29401 623 aaKnown RBP12.72□□□□□ -0.37
USP11-206ENST00000469080 ICAM3P32942 547 aa12.72□□□□□ -0.37
USP11-206ENST00000469080 TARBP2Q15633 366 aaKnown RBP12.72□□□□□ -0.37
USP11-206ENST00000469080 WASHC2DQ5SRD0 308 aa12.72□□□□□ -0.37
USP11-206ENST00000469080 C6orf118Q5T5N4 469 aa12.72□□□□□ -0.37
USP11-206ENST00000469080 ANKRD22Q5VYY1 191 aa12.72□□□□□ -0.37
USP11-206ENST00000469080 FAM117BQ6P1L5 589 aa12.72□□□□□ -0.37
USP11-206ENST00000469080 WDTC1Q8N5D0 677 aa12.72□□□□□ -0.37
USP11-206ENST00000469080 SCAIQ8N9R8 606 aa12.72□□□□□ -0.37
USP11-206ENST00000469080 NRG4Q8WWG1 115 aa12.72□□□□□ -0.37
USP11-206ENST00000469080 MARCOQ9UEW3 520 aaPredicted RBP12.72□□□□□ -0.37
USP11-206ENST00000469080 XPO7Q9UIA9 1087 aaKnown RBP12.72□□□□□ -0.37
USP11-206ENST00000469080 DIS3Q9Y2L1 958 aaKnown RBP12.72□□□□□ -0.37
USP11-206ENST00000469080 QSER1Q2KHR3 1735 aa12.72□□□□□ -0.37
USP11-206ENST00000469080 BTNL10A8MVZ5 291 aa12.71□□□□□ -0.37
USP11-206ENST00000469080 ADCY6O43306 1168 aa12.71□□□□□ -0.37
USP11-206ENST00000469080 LRCH4O75427 683 aa12.71□□□□□ -0.37
USP11-206ENST00000469080 TFDP3Q5H9I0 405 aa12.71□□□□□ -0.37
USP11-206ENST00000469080 IZUMO2Q6UXV1 221 aa12.71□□□□□ -0.37
USP11-206ENST00000469080 TRIM72Q6ZMU5 477 aa12.71□□□□□ -0.37
USP11-206ENST00000469080 USP50Q70EL3 339 aaPredicted RBP12.71□□□□□ -0.37
USP11-206ENST00000469080 IFNLR1Q8IU57 520 aaPredicted RBP12.71□□□□□ -0.37
USP11-206ENST00000469080 SIX6OS1Q8N1H7 587 aa12.71□□□□□ -0.37
USP11-206ENST00000469080 ENDOVQ8N8Q3 282 aaKnown RBP12.71□□□□□ -0.37
USP11-206ENST00000469080 GIPC3Q8TF64 312 aa12.71□□□□□ -0.37
USP11-206ENST00000469080 MAML3Q96JK9 1138 aa12.71□□□□□ -0.37
USP11-206ENST00000469080 HNRNPABQ99729 332 aaKnown RBP12.71□□□□□ -0.37
USP11-206ENST00000469080 RHOBTB2Q9BYZ6 727 aa12.71□□□□□ -0.37
USP11-206ENST00000469080 MYLK2Q9H1R3 596 aa12.71□□□□□ -0.37
USP11-206ENST00000469080 TMEM134Q9H6X4 195 aa12.71□□□□□ -0.37
USP11-206ENST00000469080 NINJ2Q9NZG7 142 aa12.71□□□□□ -0.37
USP11-206ENST00000469080 MOSPD1Q9UJG1 213 aa12.71□□□□□ -0.37
USP11-206ENST00000469080 KCNK1O00180 336 aa12.71□□□□□ -0.37
USP11-206ENST00000469080 B3GAT3O94766 335 aa12.71□□□□□ -0.37
USP11-206ENST00000469080 CBX6O95503 412 aa12.71□□□□□ -0.37
USP11-206ENST00000469080 STAMBPO95630 424 aa12.71□□□□□ -0.37
USP11-206ENST00000469080 HMGCRP04035 888 aa12.71□□□□□ -0.37
USP11-206ENST00000469080 S100BP04271 92 aaPredicted RBP12.71□□□□□ -0.37
USP11-206ENST00000469080 THPOP40225 353 aa12.71□□□□□ -0.37
USP11-206ENST00000469080 ASPAP45381 313 aa12.71□□□□□ -0.37
USP11-206ENST00000469080 NDUFV1P49821 464 aa12.71□□□□□ -0.37
USP11-206ENST00000469080 SNRPFP62306 86 aaKnown RBP12.71□□□□□ -0.37
USP11-206ENST00000469080 OCRLQ01968 901 aa12.71□□□□□ -0.37
USP11-206ENST00000469080 BMPR2Q13873 1038 aa12.71□□□□□ -0.37
USP11-206ENST00000469080 SURF1Q15526 300 aa12.71□□□□□ -0.37
USP11-206ENST00000469080 HIF1AQ16665 826 aa12.71□□□□□ -0.37
USP11-206ENST00000469080 SDHAF4Q5VUM1 108 aa12.71□□□□□ -0.37
USP11-206ENST00000469080 B3GNT6Q6ZMB0 384 aa12.71□□□□□ -0.37
USP11-206ENST00000469080 SLC4A11Q8NBS3 891 aa12.71□□□□□ -0.37
USP11-206ENST00000469080 OLIG1Q8TAK6 271 aa12.71□□□□□ -0.37
USP11-206ENST00000469080 SLITRK1Q96PX8 696 aa12.71□□□□□ -0.37
USP11-206ENST00000469080 PARK7Q99497 189 aaKnown RBP12.71□□□□□ -0.37
USP11-206ENST00000469080 CCDC68Q9H2F9 335 aa12.71□□□□□ -0.37
USP11-206ENST00000469080 FAM32AQ9Y421 112 aaKnown RBP12.71□□□□□ -0.37
USP11-206ENST00000469080 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.71□□□□□ -0.38
USP11-206ENST00000469080 TMEM191CA6NGB0 347 aa12.71□□□□□ -0.38
USP11-206ENST00000469080 ZBTB42B2RXF5 422 aa12.71□□□□□ -0.38
USP11-206ENST00000469080 SERPINB7O75635 380 aa12.71□□□□□ -0.38
USP11-206ENST00000469080 HMBSP08397 361 aa12.71□□□□□ -0.38
USP11-206ENST00000469080 AMPD1P23109 780 aa12.71□□□□□ -0.38
USP11-206ENST00000469080 MAN1A1P33908 653 aa12.71□□□□□ -0.38
USP11-206ENST00000469080 SLC1A1P43005 524 aa12.71□□□□□ -0.38
USP11-206ENST00000469080 RELAQ04206 551 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 271.9 ms