RNA–Protein interactions for RNA: ENST00000453847.2

HMGN3P1-201, Transcript of high mobility group nucleosomal binding domain 3 pseudogene 1, humanhuman

BASIC

Gene HMGN3P1, Length 193 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3P1-201ENST00000453847 BAG5Q9UL15 447 aa4.62□□□□□ -1.67
HMGN3P1-201ENST00000453847 ZFR2Q9UPR6 939 aaKnown RBP4.62□□□□□ -1.67
HMGN3P1-201ENST00000453847 GDAQ9Y2T3 454 aa4.62□□□□□ -1.67
HMGN3P1-201ENST00000453847 hCG_1807616A0A1W2PRN6 198 aa4.61□□□□□ -1.67
HMGN3P1-201ENST00000453847 DIRC3C9JPN6 131 aa4.61□□□□□ -1.67
HMGN3P1-201ENST00000453847 RFXAPO00287 272 aa4.61□□□□□ -1.67
HMGN3P1-201ENST00000453847 GPR42O15529 346 aa4.61□□□□□ -1.67
HMGN3P1-201ENST00000453847 HNRNPRO43390 633 aaKnown RBP4.61□□□□□ -1.67
HMGN3P1-201ENST00000453847 SCGB1D1O95968 90 aa4.61□□□□□ -1.67
HMGN3P1-201ENST00000453847 URODP06132 367 aa4.61□□□□□ -1.67
HMGN3P1-201ENST00000453847 SLC3A2P08195 630 aaKnown RBP4.61□□□□□ -1.67
HMGN3P1-201ENST00000453847 ARSAP15289 507 aa4.61□□□□□ -1.67
HMGN3P1-201ENST00000453847 PPP3CBP16298 524 aa4.61□□□□□ -1.67
HMGN3P1-201ENST00000453847 ZFP36P26651 326 aaKnown RBP4.61□□□□□ -1.67
HMGN3P1-201ENST00000453847 COPB2P35606 906 aa4.61□□□□□ -1.67
HMGN3P1-201ENST00000453847 LIPAP38571 399 aa4.61□□□□□ -1.67
HMGN3P1-201ENST00000453847 PAFAH1B1P43034 410 aa4.61□□□□□ -1.67
HMGN3P1-201ENST00000453847 RPS3AP61247 264 aaKnown RBP4.61□□□□□ -1.67
HMGN3P1-201ENST00000453847 ZBED6P86452 979 aa4.61□□□□□ -1.67
HMGN3P1-201ENST00000453847 CREB5Q02930 508 aa4.61□□□□□ -1.67
HMGN3P1-201ENST00000453847 RNASELQ05823 741 aaKnown RBP4.61□□□□□ -1.67
HMGN3P1-201ENST00000453847 MPP3Q13368 585 aa4.61□□□□□ -1.67
HMGN3P1-201ENST00000453847 BFSP2Q13515 415 aa4.61□□□□□ -1.67
HMGN3P1-201ENST00000453847 DNASE1L3Q13609 305 aa4.61□□□□□ -1.67
HMGN3P1-201ENST00000453847 ACVR2BQ13705 512 aa4.61□□□□□ -1.67
HMGN3P1-201ENST00000453847 THOC5Q13769 683 aaKnown RBP4.61□□□□□ -1.67
HMGN3P1-201ENST00000453847 CYP1B1Q16678 543 aa4.61□□□□□ -1.67
HMGN3P1-201ENST00000453847 FAM187BQ17R55 369 aa4.61□□□□□ -1.67
HMGN3P1-201ENST00000453847 ZNF766Q5HY98 468 aa4.61□□□□□ -1.67
HMGN3P1-201ENST00000453847 NAA35Q5VZE5 725 aa4.61□□□□□ -1.67
HMGN3P1-201ENST00000453847 ACSM6Q6P461 480 aa4.61□□□□□ -1.67
HMGN3P1-201ENST00000453847 DPY19L3Q6ZPD9 716 aa4.61□□□□□ -1.67
HMGN3P1-201ENST00000453847 KRT27Q7Z3Y8 459 aa4.61□□□□□ -1.67
HMGN3P1-201ENST00000453847 GDF7Q7Z4P5 450 aa4.61□□□□□ -1.67
HMGN3P1-201ENST00000453847 PLEKHH3Q7Z736 793 aa4.61□□□□□ -1.67
HMGN3P1-201ENST00000453847 RAB11FIP4Q86YS3 637 aa4.61□□□□□ -1.67
HMGN3P1-201ENST00000453847 GSPT2Q8IYD1 628 aaKnown RBP4.61□□□□□ -1.67
HMGN3P1-201ENST00000453847 TTC39CQ8N584 583 aa4.61□□□□□ -1.67
HMGN3P1-201ENST00000453847 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.61□□□□□ -1.67
HMGN3P1-201ENST00000453847 GPATCH11Q8N954 259 aa4.61□□□□□ -1.67
HMGN3P1-201ENST00000453847 ZCCHC10Q8TBK6 192 aa4.61□□□□□ -1.67
HMGN3P1-201ENST00000453847 LPIN2Q92539 896 aa4.61□□□□□ -1.67
HMGN3P1-201ENST00000453847 SH3KBP1Q96B97 665 aa4.61□□□□□ -1.67
HMGN3P1-201ENST00000453847 BOD1Q96IK1 185 aa4.61□□□□□ -1.67
HMGN3P1-201ENST00000453847 DCLRE1CQ96SD1 692 aaKnown RBP4.61□□□□□ -1.67
HMGN3P1-201ENST00000453847 MPHOSPH8Q99549 860 aa4.61□□□□□ -1.67
HMGN3P1-201ENST00000453847 GPR87Q9BY21 358 aa4.61□□□□□ -1.67
HMGN3P1-201ENST00000453847 ACTRT3Q9BYD9 372 aa4.61□□□□□ -1.67
HMGN3P1-201ENST00000453847 CTDSP1Q9GZU7 261 aa4.61□□□□□ -1.67
HMGN3P1-201ENST00000453847 INTS2Q9H0H0 1204 aaKnown RBP4.61□□□□□ -1.67
HMGN3P1-201ENST00000453847 ALDH8A1Q9H2A2 487 aaPredicted RBP4.61□□□□□ -1.67
HMGN3P1-201ENST00000453847 MROH8Q9H579 483 aa4.61□□□□□ -1.67
HMGN3P1-201ENST00000453847 MTMR4Q9NYA4 1195 aa4.61□□□□□ -1.67
HMGN3P1-201ENST00000453847 NFKBIL1Q9UBC1 381 aaPredicted RBP4.61□□□□□ -1.67
HMGN3P1-201ENST00000453847 DKK2Q9UBU2 259 aa4.61□□□□□ -1.67
HMGN3P1-201ENST00000453847 PCDHGB4Q9UN71 923 aa4.61□□□□□ -1.67
HMGN3P1-201ENST00000453847 UBE2J1Q9Y385 318 aaPredicted RBP4.61□□□□□ -1.67
HMGN3P1-201ENST00000453847 PCDHB2Q9Y5E7 798 aa4.61□□□□□ -1.67
HMGN3P1-201ENST00000453847 FPGT-TNNI3KV9GXZ4 949 aa4.61□□□□□ -1.67
HMGN3P1-201ENST00000453847 CYP3A7-CYP3A51PA0A087WV96 503 aa4.6□□□□□ -1.67
HMGN3P1-201ENST00000453847 A8MVJ9 347 aa4.6□□□□□ -1.67
HMGN3P1-201ENST00000453847 VWC2LB2RUY7 222 aa4.6□□□□□ -1.67
HMGN3P1-201ENST00000453847 GRM8O00222 908 aa4.6□□□□□ -1.67
HMGN3P1-201ENST00000453847 LAMTOR5O43504 91 aa4.6□□□□□ -1.67
HMGN3P1-201ENST00000453847 PMPCBO75439 489 aa4.6□□□□□ -1.67
HMGN3P1-201ENST00000453847 WEE2P0C1S8 567 aa4.6□□□□□ -1.67
HMGN3P1-201ENST00000453847 CD19P15391 556 aa4.6□□□□□ -1.67
HMGN3P1-201ENST00000453847 TAL1P17542 331 aaPredicted RBP4.6□□□□□ -1.67
HMGN3P1-201ENST00000453847 CYP3A7P24462 503 aa4.6□□□□□ -1.67
HMGN3P1-201ENST00000453847 VAV2P52735 878 aa4.6□□□□□ -1.67
HMGN3P1-201ENST00000453847 MVDP53602 400 aa4.6□□□□□ -1.67
HMGN3P1-201ENST00000453847 CDH15P55291 814 aa4.6□□□□□ -1.67
HMGN3P1-201ENST00000453847 TAS2R50P59544 299 aa4.6□□□□□ -1.67
HMGN3P1-201ENST00000453847 TBL3Q12788 808 aaKnown RBP4.6□□□□□ -1.67
HMGN3P1-201ENST00000453847 MAMLD1Q13495 774 aa4.6□□□□□ -1.67
HMGN3P1-201ENST00000453847 KCNA10Q16322 511 aa4.6□□□□□ -1.67
HMGN3P1-201ENST00000453847 DUSP28Q4G0W2 176 aa4.6□□□□□ -1.67
HMGN3P1-201ENST00000453847 SH2D4BQ5SQS7 431 aa4.6□□□□□ -1.67
HMGN3P1-201ENST00000453847 CFAP58Q5T655 872 aa4.6□□□□□ -1.67
HMGN3P1-201ENST00000453847 NAPEPLDQ6IQ20 393 aa4.6□□□□□ -1.67
HMGN3P1-201ENST00000453847 RPUSD3Q6P087 351 aaKnown RBP4.6□□□□□ -1.67
HMGN3P1-201ENST00000453847 TMCO3Q6UWJ1 677 aa4.6□□□□□ -1.67
HMGN3P1-201ENST00000453847 CNTROBQ8N137 903 aa4.6□□□□□ -1.67
HMGN3P1-201ENST00000453847 ANKRD35Q8N283 1001 aa4.6□□□□□ -1.67
HMGN3P1-201ENST00000453847 ZNF808Q8N4W9 903 aaPredicted RBP4.6□□□□□ -1.67
HMGN3P1-201ENST00000453847 SYT8Q8NBV8 401 aa4.6□□□□□ -1.67
HMGN3P1-201ENST00000453847 R3HDM4Q96D70 268 aa4.6□□□□□ -1.67
HMGN3P1-201ENST00000453847 RSPRY1Q96DX4 576 aa4.6□□□□□ -1.67
HMGN3P1-201ENST00000453847 FAM84AQ96KN4 292 aa4.6□□□□□ -1.67
HMGN3P1-201ENST00000453847 TIGD1Q96MW7 591 aa4.6□□□□□ -1.67
HMGN3P1-201ENST00000453847 ZMAT2Q96NC0 199 aaKnown RBP4.6□□□□□ -1.67
HMGN3P1-201ENST00000453847 ADAM2Q99965 735 aa4.6□□□□□ -1.67
HMGN3P1-201ENST00000453847 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.6□□□□□ -1.67
HMGN3P1-201ENST00000453847 MXD3Q9BW11 206 aa4.6□□□□□ -1.67
HMGN3P1-201ENST00000453847 AP1M1Q9BXS5 423 aa4.6□□□□□ -1.67
HMGN3P1-201ENST00000453847 TPSD1Q9BZJ3 242 aa4.6□□□□□ -1.67
HMGN3P1-201ENST00000453847 CLPBQ9H078 707 aa4.6□□□□□ -1.67
HMGN3P1-201ENST00000453847 MUC13Q9H3R2 512 aa4.6□□□□□ -1.67
HMGN3P1-201ENST00000453847 EIF2B3Q9NR50 452 aaKnown RBP4.6□□□□□ -1.67
HMGN3P1-201ENST00000453847 THAP1Q9NVV9 213 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms