RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 CHST8Q9H2A9 424 aa5.81□□□□□ -1.48
HMGB3P5-201ENST00000428894 MID2Q9UJV3 735 aa5.81□□□□□ -1.48
HMGB3P5-201ENST00000428894 AKAP12Q02952 1782 aa5.8□□□□□ -1.48
HMGB3P5-201ENST00000428894 ACEP12821 1306 aa5.8□□□□□ -1.48
HMGB3P5-201ENST00000428894 PEAK1Q9H792 1746 aa5.8□□□□□ -1.48
HMGB3P5-201ENST00000428894 COL5A2P05997 1499 aaPredicted RBP5.8□□□□□ -1.48
HMGB3P5-201ENST00000428894 E5RJQ4 531 aa5.8□□□□□ -1.48
HMGB3P5-201ENST00000428894 TSPAN6O43657 245 aa5.8□□□□□ -1.48
HMGB3P5-201ENST00000428894 TXNP10599 105 aaKnown RBP5.8□□□□□ -1.48
HMGB3P5-201ENST00000428894 TPH1P17752 444 aa5.8□□□□□ -1.48
HMGB3P5-201ENST00000428894 HMGB2P26583 209 aaKnown RBP5.8□□□□□ -1.48
HMGB3P5-201ENST00000428894 CPT1AP50416 773 aa5.8□□□□□ -1.48
HMGB3P5-201ENST00000428894 AWAT1Q58HT5 328 aa5.8□□□□□ -1.48
HMGB3P5-201ENST00000428894 PPP4R4Q6NUP7 873 aa5.8□□□□□ -1.48
HMGB3P5-201ENST00000428894 SRGAP1Q7Z6B7 1085 aa5.8□□□□□ -1.48
HMGB3P5-201ENST00000428894 SESTD1Q86VW0 696 aa5.8□□□□□ -1.48
HMGB3P5-201ENST00000428894 YAF2Q8IY57 180 aa5.8□□□□□ -1.48
HMGB3P5-201ENST00000428894 MYO1HQ8N1T3 1032 aa5.8□□□□□ -1.48
HMGB3P5-201ENST00000428894 TRIM36Q9NQ86 728 aa5.8□□□□□ -1.48
HMGB3P5-201ENST00000428894 ITGB1BP2Q9UKP3 347 aa5.8□□□□□ -1.48
HMGB3P5-201ENST00000428894 G3BP2Q9UN86 482 aaKnown RBP5.8□□□□□ -1.48
HMGB3P5-201ENST00000428894 POLR3AO14802 1390 aaPredicted RBP5.8□□□□□ -1.48
HMGB3P5-201ENST00000428894 BRD4O60885 1362 aaPredicted RBP5.8□□□□□ -1.48
HMGB3P5-201ENST00000428894 LMO7Q8WWI1 1683 aa5.79□□□□□ -1.48
HMGB3P5-201ENST00000428894 AGPSO00116 658 aa5.79□□□□□ -1.48
HMGB3P5-201ENST00000428894 GOLIM4O00461 696 aa5.79□□□□□ -1.48
HMGB3P5-201ENST00000428894 TMPRSS11DO60235 418 aa5.79□□□□□ -1.48
HMGB3P5-201ENST00000428894 MGEA5O60502 916 aa5.79□□□□□ -1.48
HMGB3P5-201ENST00000428894 ZBED1O96006 694 aa5.79□□□□□ -1.48
HMGB3P5-201ENST00000428894 IL1R1P14778 569 aa5.79□□□□□ -1.48
HMGB3P5-201ENST00000428894 BTF3P20290 206 aaKnown RBP5.79□□□□□ -1.48
HMGB3P5-201ENST00000428894 GRM3Q14832 879 aa5.79□□□□□ -1.48
HMGB3P5-201ENST00000428894 CHST15Q7LFX5 561 aaPredicted RBP5.79□□□□□ -1.48
HMGB3P5-201ENST00000428894 C11orf44Q8N8P7 122 aa5.79□□□□□ -1.48
HMGB3P5-201ENST00000428894 C9orf106Q8NAJ2 232 aa5.79□□□□□ -1.48
HMGB3P5-201ENST00000428894 MAFAQ8NHW3 353 aaPredicted RBP5.79□□□□□ -1.48
HMGB3P5-201ENST00000428894 WDYHV1Q96HA8 205 aa5.79□□□□□ -1.48
HMGB3P5-201ENST00000428894 ZC3H10Q96K80 434 aaKnown RBP5.79□□□□□ -1.48
HMGB3P5-201ENST00000428894 TMEM79Q9BSE2 394 aa5.79□□□□□ -1.48
HMGB3P5-201ENST00000428894 CDK19Q9BWU1 502 aa5.79□□□□□ -1.48
HMGB3P5-201ENST00000428894 TRNAU1APQ9NX07 287 aaKnown RBP5.79□□□□□ -1.48
HMGB3P5-201ENST00000428894 DKK4Q9UBT3 224 aa5.79□□□□□ -1.48
HMGB3P5-201ENST00000428894 AQP7P3A6NL99 342 aa5.78□□□□□ -1.48
HMGB3P5-201ENST00000428894 VSTM5A8MXK1 200 aa5.78□□□□□ -1.48
HMGB3P5-201ENST00000428894 TPP1O14773 563 aa5.78□□□□□ -1.48
HMGB3P5-201ENST00000428894 HRGP04196 525 aa5.78□□□□□ -1.48
HMGB3P5-201ENST00000428894 PARP1P09874 1014 aaKnown RBP5.78□□□□□ -1.48
HMGB3P5-201ENST00000428894 CD19P15391 556 aa5.78□□□□□ -1.48
HMGB3P5-201ENST00000428894 ITGB6P18564 788 aa5.78□□□□□ -1.48
HMGB3P5-201ENST00000428894 NR4A2P43354 598 aa5.78□□□□□ -1.48
HMGB3P5-201ENST00000428894 PLCD1P51178 756 aa5.78□□□□□ -1.48
HMGB3P5-201ENST00000428894 FAM193AP78312 1265 aa5.78□□□□□ -1.48
HMGB3P5-201ENST00000428894 GHRHRQ02643 423 aa5.78□□□□□ -1.48
HMGB3P5-201ENST00000428894 LARS2Q15031 903 aaKnown RBP5.78□□□□□ -1.48
HMGB3P5-201ENST00000428894 TMEM63BQ5T3F8 832 aa5.78□□□□□ -1.48
HMGB3P5-201ENST00000428894 DCDC5Q6ZRR9 648 aa5.78□□□□□ -1.48
HMGB3P5-201ENST00000428894 UNC13DQ70J99 1090 aa5.78□□□□□ -1.48
HMGB3P5-201ENST00000428894 LINC01465Q8N7H1 131 aa5.78□□□□□ -1.48
HMGB3P5-201ENST00000428894 NANOGP1Q8N7R0 232 aa5.78□□□□□ -1.48
HMGB3P5-201ENST00000428894 OSR1Q8TAX0 266 aaPredicted RBP5.78□□□□□ -1.48
HMGB3P5-201ENST00000428894 ZNF398Q8TD17 642 aa5.78□□□□□ -1.48
HMGB3P5-201ENST00000428894 PNISRQ8TF01 805 aaKnown RBP5.78□□□□□ -1.48
HMGB3P5-201ENST00000428894 HS6ST2Q96MM7 605 aa5.78□□□□□ -1.48
HMGB3P5-201ENST00000428894 SHANK3Q9BYB0 1731 aa5.78□□□□□ -1.48
HMGB3P5-201ENST00000428894 NKX1-2Q9UD57 310 aaPredicted RBP5.78□□□□□ -1.48
HMGB3P5-201ENST00000428894 LRRC37A3O60309 1634 aa5.77□□□□□ -1.48
HMGB3P5-201ENST00000428894 FRMPD2Q68DX3 1309 aaPredicted RBP5.77□□□□□ -1.49
HMGB3P5-201ENST00000428894 GOLGA6CA6NDK9 693 aa5.77□□□□□ -1.49
HMGB3P5-201ENST00000428894 GOLGA6BA6NDN3 693 aa5.77□□□□□ -1.49
HMGB3P5-201ENST00000428894 RNF8O76064 485 aa5.77□□□□□ -1.49
HMGB3P5-201ENST00000428894 INMTO95050 263 aa5.77□□□□□ -1.49
HMGB3P5-201ENST00000428894 GOLGA6DP0CG33 693 aa5.77□□□□□ -1.49
HMGB3P5-201ENST00000428894 PEX2P28328 305 aa5.77□□□□□ -1.49
HMGB3P5-201ENST00000428894 MCM5P33992 734 aa5.77□□□□□ -1.49
HMGB3P5-201ENST00000428894 CARSP49589 748 aaKnown RBP5.77□□□□□ -1.49
HMGB3P5-201ENST00000428894 KCNAB1Q14722 419 aa5.77□□□□□ -1.49
HMGB3P5-201ENST00000428894 PLAG1Q6DJT9 500 aa5.77□□□□□ -1.49
HMGB3P5-201ENST00000428894 METTL25Q8N6Q8 603 aa5.77□□□□□ -1.49
HMGB3P5-201ENST00000428894 KCNH5Q8NCM2 988 aa5.77□□□□□ -1.49
HMGB3P5-201ENST00000428894 ZNF668Q96K58 619 aaPredicted RBP5.77□□□□□ -1.49
HMGB3P5-201ENST00000428894 HIST1H2AAQ96QV6 131 aa5.77□□□□□ -1.49
HMGB3P5-201ENST00000428894 FAM83DQ9H4H8 585 aa5.77□□□□□ -1.49
HMGB3P5-201ENST00000428894 GOLGA6AQ9NYA3 693 aa5.77□□□□□ -1.49
HMGB3P5-201ENST00000428894 ASAP1Q9ULH1 1129 aa5.77□□□□□ -1.49
HMGB3P5-201ENST00000428894 RIMKLBQ9ULI2 386 aa5.77□□□□□ -1.49
HMGB3P5-201ENST00000428894 ATP10DQ9P241 1426 aa5.76□□□□□ -1.49
HMGB3P5-201ENST00000428894 H3BNC9 293 aa5.76□□□□□ -1.49
HMGB3P5-201ENST00000428894 ATF7P17544 494 aaPredicted RBP5.76□□□□□ -1.49
HMGB3P5-201ENST00000428894 NTSR1P30989 418 aa5.76□□□□□ -1.49
HMGB3P5-201ENST00000428894 DEUP1Q05D60 604 aa5.76□□□□□ -1.49
HMGB3P5-201ENST00000428894 GFOD2Q3B7J2 385 aa5.76□□□□□ -1.49
HMGB3P5-201ENST00000428894 SHC4Q6S5L8 630 aa5.76□□□□□ -1.49
HMGB3P5-201ENST00000428894 VSTM1Q6UX27 236 aa5.76□□□□□ -1.49
HMGB3P5-201ENST00000428894 CLEC9AQ6UXN8 241 aa5.76□□□□□ -1.49
HMGB3P5-201ENST00000428894 RANBP10Q6VN20 620 aa5.76□□□□□ -1.49
HMGB3P5-201ENST00000428894 USP49Q70CQ1 688 aa5.76□□□□□ -1.49
HMGB3P5-201ENST00000428894 IPCEF1Q8WWN9 437 aaPredicted RBP5.76□□□□□ -1.49
HMGB3P5-201ENST00000428894 MAP4K1Q92918 833 aa5.76□□□□□ -1.49
HMGB3P5-201ENST00000428894 CUL5Q93034 780 aa5.76□□□□□ -1.49
HMGB3P5-201ENST00000428894 HMCESQ96FZ2 354 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms