RNA–Protein interactions for RNA: ENST00000428693.1

TTC3-208, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-208ENST00000428693 TFAP2BQ92481 460 aa12.55□□□□□ -0.4
TTC3-208ENST00000428693 TMA16Q96EY4 203 aaKnown RBP12.55□□□□□ -0.4
TTC3-208ENST00000428693 SIPA1Q96FS4 1042 aa12.55□□□□□ -0.4
TTC3-208ENST00000428693 SLC32A1Q9H598 525 aa12.55□□□□□ -0.4
TTC3-208ENST00000428693 CNGB3Q9NQW8 809 aa12.55□□□□□ -0.4
TTC3-208ENST00000428693 STIM2Q9P246 746 aa12.55□□□□□ -0.4
TTC3-208ENST00000428693 THAP10Q9P2Z0 257 aaPredicted RBP12.55□□□□□ -0.4
TTC3-208ENST00000428693 EVLQ9UI08 416 aaPredicted RBP12.55□□□□□ -0.4
TTC3-208ENST00000428693 SLC6A14Q9UN76 642 aa12.55□□□□□ -0.4
TTC3-208ENST00000428693 SLC27A6Q9Y2P4 619 aa12.55□□□□□ -0.4
TTC3-208ENST00000428693 HBS1LQ9Y450 684 aaKnown RBP12.55□□□□□ -0.4
TTC3-208ENST00000428693 ASCC3Q8N3C0 2202 aaKnown RBP12.54□□□□□ -0.4
TTC3-208ENST00000428693 RNF225M0QZC1 329 aaPredicted RBP12.54□□□□□ -0.4
TTC3-208ENST00000428693 GADD45BO75293 160 aaPredicted RBP12.54□□□□□ -0.4
TTC3-208ENST00000428693 KRT37O76014 449 aa12.54□□□□□ -0.4
TTC3-208ENST00000428693 HLA-EP13747 358 aa12.54□□□□□ -0.4
TTC3-208ENST00000428693 PMLP29590 882 aa12.54□□□□□ -0.4
TTC3-208ENST00000428693 CD6P30203 668 aa12.54□□□□□ -0.4
TTC3-208ENST00000428693 DAOAP59103 153 aa12.54□□□□□ -0.4
TTC3-208ENST00000428693 MCCD1P59942 119 aaPredicted RBP12.54□□□□□ -0.4
TTC3-208ENST00000428693 KCNH2Q12809 1159 aa12.54□□□□□ -0.4
TTC3-208ENST00000428693 PAK1Q13153 545 aa12.54□□□□□ -0.4
TTC3-208ENST00000428693 E2F5Q15329 346 aa12.54□□□□□ -0.4
TTC3-208ENST00000428693 TRIP4Q15650 581 aaPredicted RBP12.54□□□□□ -0.4
TTC3-208ENST00000428693 PLEKHG6Q3KR16 790 aa12.54□□□□□ -0.4
TTC3-208ENST00000428693 PMF1Q6P1K2 205 aa12.54□□□□□ -0.4
TTC3-208ENST00000428693 SLC23A3Q6PIS1 610 aa12.54□□□□□ -0.4
TTC3-208ENST00000428693 RABEPKQ7Z6M1 372 aa12.54□□□□□ -0.4
TTC3-208ENST00000428693 TMPRSS6Q8IU80 811 aa12.54□□□□□ -0.4
TTC3-208ENST00000428693 SLC41A1Q8IVJ1 513 aa12.54□□□□□ -0.4
TTC3-208ENST00000428693 ARHGEF19Q8IW93 802 aa12.54□□□□□ -0.4
TTC3-208ENST00000428693 CPXM2Q8N436 756 aa12.54□□□□□ -0.4
TTC3-208ENST00000428693 ZNF366Q8N895 744 aa12.54□□□□□ -0.4
TTC3-208ENST00000428693 OR2I1PQ8NGU4 316 aa12.54□□□□□ -0.4
TTC3-208ENST00000428693 CLEC4CQ8WTT0 213 aa12.54□□□□□ -0.4
TTC3-208ENST00000428693 CYB5D2Q8WUJ1 264 aa12.54□□□□□ -0.4
TTC3-208ENST00000428693 PRCCQ92733 491 aaPredicted RBP12.54□□□□□ -0.4
TTC3-208ENST00000428693 FAM149B1Q96BN6 582 aa12.54□□□□□ -0.4
TTC3-208ENST00000428693 TOE1Q96GM8 510 aaKnown RBP12.54□□□□□ -0.4
TTC3-208ENST00000428693 GPR174Q9BXC1 333 aa12.54□□□□□ -0.4
TTC3-208ENST00000428693 SRRTQ9BXP5 876 aaKnown RBP12.54□□□□□ -0.4
TTC3-208ENST00000428693 ABCB8Q9NUT2 735 aa12.54□□□□□ -0.4
TTC3-208ENST00000428693 FBXO10Q9UK96 956 aa12.54□□□□□ -0.4
TTC3-208ENST00000428693 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.54□□□□□ -0.4
TTC3-208ENST00000428693 PLA2G4CQ9UP65 541 aa12.54□□□□□ -0.4
TTC3-208ENST00000428693 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.54□□□□□ -0.4
TTC3-208ENST00000428693 PLXND1Q9Y4D7 1925 aa12.53□□□□□ -0.4
TTC3-208ENST00000428693 GOLGA6L7A0A1B0GV03 622 aa12.53□□□□□ -0.4
TTC3-208ENST00000428693 PPP1R3GB7ZBB8 358 aa12.53□□□□□ -0.4
TTC3-208ENST00000428693 NPC1O15118 1278 aa12.53□□□□□ -0.4
TTC3-208ENST00000428693 OPHN1O60890 802 aa12.53□□□□□ -0.4
TTC3-208ENST00000428693 TBL1XO60907 577 aa12.53□□□□□ -0.4
TTC3-208ENST00000428693 AFPP02771 609 aaKnown RBP12.53□□□□□ -0.4
TTC3-208ENST00000428693 LTFP02788 710 aa12.53□□□□□ -0.4
TTC3-208ENST00000428693 SYPP08247 313 aa12.53□□□□□ -0.4
TTC3-208ENST00000428693 SERPINF2P08697 491 aa12.53□□□□□ -0.4
TTC3-208ENST00000428693 NCAM1P13591 858 aa12.53□□□□□ -0.4
TTC3-208ENST00000428693 CEACAM1P13688 526 aa12.53□□□□□ -0.4
TTC3-208ENST00000428693 GNSP15586 552 aa12.53□□□□□ -0.4
TTC3-208ENST00000428693 SPINK2P20155 84 aa12.53□□□□□ -0.4
TTC3-208ENST00000428693 PRKCHP24723 683 aa12.53□□□□□ -0.4
TTC3-208ENST00000428693 USP8P40818 1118 aa12.53□□□□□ -0.4
TTC3-208ENST00000428693 SLC11A2P49281 568 aa12.53□□□□□ -0.4
TTC3-208ENST00000428693 CNGA2Q16280 664 aa12.53□□□□□ -0.4
TTC3-208ENST00000428693 WDR45BQ5MNZ6 344 aa12.53□□□□□ -0.4
TTC3-208ENST00000428693 ADGRF1Q5T601 910 aa12.53□□□□□ -0.4
TTC3-208ENST00000428693 TTI2Q6NXR4 508 aa12.53□□□□□ -0.4
TTC3-208ENST00000428693 RFWD3Q6PCD5 774 aa12.53□□□□□ -0.4
TTC3-208ENST00000428693 CHST9Q7L1S5 443 aa12.53□□□□□ -0.4
TTC3-208ENST00000428693 BHLHA9Q7RTU4 235 aa12.53□□□□□ -0.4
TTC3-208ENST00000428693 CCDC117Q8IWD4 279 aaPredicted RBP12.53□□□□□ -0.4
TTC3-208ENST00000428693 MINDY1Q8N5J2 469 aa12.53□□□□□ -0.4
TTC3-208ENST00000428693 UBR7Q8N806 425 aa12.53□□□□□ -0.4
TTC3-208ENST00000428693 EHBP1Q8NDI1 1231 aa12.53□□□□□ -0.4
TTC3-208ENST00000428693 KCTD13Q8WZ19 329 aa12.53□□□□□ -0.4
TTC3-208ENST00000428693 SNX19Q92543 992 aa12.53□□□□□ -0.4
TTC3-208ENST00000428693 FOXJ1Q92949 421 aa12.53□□□□□ -0.4
TTC3-208ENST00000428693 PIWIL1Q96J94 861 aaKnown RBP12.53□□□□□ -0.4
TTC3-208ENST00000428693 SLC2A11Q9BYW1 496 aa12.53□□□□□ -0.4
TTC3-208ENST00000428693 MKRN2Q9H000 416 aaKnown RBP12.53□□□□□ -0.4
TTC3-208ENST00000428693 INTS2Q9H0H0 1204 aaKnown RBP12.53□□□□□ -0.4
TTC3-208ENST00000428693 UBE2TQ9NPD8 197 aaPredicted RBP12.53□□□□□ -0.4
TTC3-208ENST00000428693 CEP295Q9C0D2 2601 aa12.53□□□□□ -0.4
TTC3-208ENST00000428693 SPAARA0A1B0GVQ0 90 aa12.52□□□□□ -0.41
TTC3-208ENST00000428693 TYW5A2RUC4 315 aaKnown RBP12.52□□□□□ -0.41
TTC3-208ENST00000428693 CAPN9O14815 690 aa12.52□□□□□ -0.41
TTC3-208ENST00000428693 TIMM44O43615 452 aa12.52□□□□□ -0.41
TTC3-208ENST00000428693 GNA14O95837 355 aa12.52□□□□□ -0.41
TTC3-208ENST00000428693 MOCS2O96007 188 aaPredicted RBP12.52□□□□□ -0.41
TTC3-208ENST00000428693 BMP6P22004 513 aa12.52□□□□□ -0.41
TTC3-208ENST00000428693 HOXD9P28356 352 aaPredicted RBP12.52□□□□□ -0.41
TTC3-208ENST00000428693 HOXD12P35452 270 aa12.52□□□□□ -0.41
TTC3-208ENST00000428693 TBX4P57082 545 aa12.52□□□□□ -0.41
TTC3-208ENST00000428693 MORC3Q14149 939 aa12.52□□□□□ -0.41
TTC3-208ENST00000428693 EIF4HQ15056 248 aaKnown RBP12.52□□□□□ -0.41
TTC3-208ENST00000428693 STILQ15468 1287 aa12.52□□□□□ -0.41
TTC3-208ENST00000428693 CAMK4Q16566 473 aa12.52□□□□□ -0.41
TTC3-208ENST00000428693 TMEM215Q68D42 235 aa12.52□□□□□ -0.41
TTC3-208ENST00000428693 UNC45BQ8IWX7 931 aa12.52□□□□□ -0.41
TTC3-208ENST00000428693 SCUBE3Q8IX30 993 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms