RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 FAM217AQ8IXS0 508 aa11.66□□□□□ -0.54
RFFL-204ENST00000414419 FAM160A2Q8N612 972 aaPredicted RBP11.66□□□□□ -0.54
RFFL-204ENST00000414419 TMEM35BQ8NCS4 154 aa11.66□□□□□ -0.54
RFFL-204ENST00000414419 MSANTD4Q8NCY6 345 aa11.66□□□□□ -0.54
RFFL-204ENST00000414419 C1orf131Q8NDD1 294 aaKnown RBP11.66□□□□□ -0.54
RFFL-204ENST00000414419 ADAM32Q8TC27 787 aa11.66□□□□□ -0.54
RFFL-204ENST00000414419 AZIN2Q96A70 460 aa11.66□□□□□ -0.54
RFFL-204ENST00000414419 SPAG5Q96R06 1193 aa11.66□□□□□ -0.54
RFFL-204ENST00000414419 CPXM1Q96SM3 734 aa11.66□□□□□ -0.54
RFFL-204ENST00000414419 NAA15Q9BXJ9 866 aaKnown RBP11.66□□□□□ -0.54
RFFL-204ENST00000414419 IRX2Q9BZI1 471 aaPredicted RBP11.66□□□□□ -0.54
RFFL-204ENST00000414419 FAM207AQ9NSI2 230 aaPredicted RBP11.66□□□□□ -0.54
RFFL-204ENST00000414419 LIMA1Q9UHB6 759 aaKnown RBP11.66□□□□□ -0.54
RFFL-204ENST00000414419 SLC12A6Q9UHW9 1150 aa11.66□□□□□ -0.54
RFFL-204ENST00000414419 STOML2Q9UJZ1 356 aa11.66□□□□□ -0.54
RFFL-204ENST00000414419 FBXO10Q9UK96 956 aa11.66□□□□□ -0.54
RFFL-204ENST00000414419 USP18Q9UMW8 372 aa11.66□□□□□ -0.54
RFFL-204ENST00000414419 DAAM1Q9Y4D1 1078 aa11.66□□□□□ -0.54
RFFL-204ENST00000414419 ZNF292O60281 2723 aa11.66□□□□□ -0.54
RFFL-204ENST00000414419 FRYLO94915 3013 aa11.66□□□□□ -0.54
RFFL-204ENST00000414419 CEP192Q8TEP8 1941 aa11.66□□□□□ -0.54
RFFL-204ENST00000414419 NUP205Q92621 2012 aa11.65□□□□□ -0.54
RFFL-204ENST00000414419 DMDP11532 3685 aa11.65□□□□□ -0.54
RFFL-204ENST00000414419 SMTNL1A8MU46 457 aa11.65□□□□□ -0.54
RFFL-204ENST00000414419 F8VZ95 297 aa11.65□□□□□ -0.54
RFFL-204ENST00000414419 IRAK2O43187 625 aa11.65□□□□□ -0.54
RFFL-204ENST00000414419 TBL1XO60907 577 aa11.65□□□□□ -0.54
RFFL-204ENST00000414419 HSF2BPO75031 334 aa11.65□□□□□ -0.54
RFFL-204ENST00000414419 ADAM23O75077 832 aa11.65□□□□□ -0.54
RFFL-204ENST00000414419 TRUB2O95900 331 aaKnown RBP11.65□□□□□ -0.54
RFFL-204ENST00000414419 MOCS2O96007 188 aaPredicted RBP11.65□□□□□ -0.54
RFFL-204ENST00000414419 IGLV3-27P01718 113 aa11.65□□□□□ -0.54
RFFL-204ENST00000414419 FYNP06241 537 aa11.65□□□□□ -0.54
RFFL-204ENST00000414419 CDK17Q00537 523 aa11.65□□□□□ -0.54
RFFL-204ENST00000414419 UBXN1Q04323 297 aa11.65□□□□□ -0.54
RFFL-204ENST00000414419 SPEM2Q0P670 501 aa11.65□□□□□ -0.54
RFFL-204ENST00000414419 BYSLQ13895 437 aaKnown RBP11.65□□□□□ -0.54
RFFL-204ENST00000414419 ANO6Q4KMQ2 910 aa11.65□□□□□ -0.54
RFFL-204ENST00000414419 TAF3Q5VWG9 929 aa11.65□□□□□ -0.54
RFFL-204ENST00000414419 SYPL2Q5VXT5 272 aa11.65□□□□□ -0.54
RFFL-204ENST00000414419 DPY19L2P1Q6NXN4 242 aa11.65□□□□□ -0.54
RFFL-204ENST00000414419 TAC4Q86UU9 113 aa11.65□□□□□ -0.54
RFFL-204ENST00000414419 RASSF3Q86WH2 238 aa11.65□□□□□ -0.54
RFFL-204ENST00000414419 ERICH1Q86X53 443 aa11.65□□□□□ -0.54
RFFL-204ENST00000414419 ZDHHC17Q8IUH5 632 aa11.65□□□□□ -0.54
RFFL-204ENST00000414419 WDTC1Q8N5D0 677 aa11.65□□□□□ -0.54
RFFL-204ENST00000414419 AOPEPQ8N6M6 819 aa11.65□□□□□ -0.54
RFFL-204ENST00000414419 ZNF557Q8N988 423 aaPredicted RBP11.65□□□□□ -0.54
RFFL-204ENST00000414419 MDGA1Q8NFP4 955 aa11.65□□□□□ -0.54
RFFL-204ENST00000414419 NEK11Q8NG66 645 aa11.65□□□□□ -0.54
RFFL-204ENST00000414419 HMGB4Q8WW32 186 aa11.65□□□□□ -0.54
RFFL-204ENST00000414419 RNF34Q969K3 372 aa11.65□□□□□ -0.54
RFFL-204ENST00000414419 LOXL4Q96JB6 756 aa11.65□□□□□ -0.54
RFFL-204ENST00000414419 SPACA7Q96KW9 195 aa11.65□□□□□ -0.54
RFFL-204ENST00000414419 CIPCQ9C0C6 399 aa11.65□□□□□ -0.54
RFFL-204ENST00000414419 FAM204AQ9H8W3 233 aa11.65□□□□□ -0.54
RFFL-204ENST00000414419 NLRC4Q9NPP4 1024 aa11.65□□□□□ -0.54
RFFL-204ENST00000414419 ASNSD1Q9NWL6 643 aa11.65□□□□□ -0.54
RFFL-204ENST00000414419 SPTBN4Q9H254 2564 aa11.65□□□□□ -0.55
RFFL-204ENST00000414419 SYNJ2BP-COX16A0A087WUM0 186 aa11.64□□□□□ -0.55
RFFL-204ENST00000414419 GOLGA6L7A0A1B0GV03 622 aa11.64□□□□□ -0.55
RFFL-204ENST00000414419 LGALS16A8MUM7 142 aa11.64□□□□□ -0.55
RFFL-204ENST00000414419 GFRA2O00451 464 aa11.64□□□□□ -0.55
RFFL-204ENST00000414419 NPC1O15118 1278 aa11.64□□□□□ -0.55
RFFL-204ENST00000414419 MAP3K13O43283 966 aa11.64□□□□□ -0.55
RFFL-204ENST00000414419 TIMM44O43615 452 aa11.64□□□□□ -0.55
RFFL-204ENST00000414419 LRP3O75074 770 aa11.64□□□□□ -0.55
RFFL-204ENST00000414419 GRAP2O75791 330 aa11.64□□□□□ -0.55
RFFL-204ENST00000414419 GFPT2O94808 682 aa11.64□□□□□ -0.55
RFFL-204ENST00000414419 SLC2A3P11169 496 aa11.64□□□□□ -0.55
RFFL-204ENST00000414419 HNRNPLP14866 589 aaKnown RBP eCLIP11.64□□□□□ -0.55
RFFL-204ENST00000414419 PTMSP20962 102 aa11.64□□□□□ -0.55
RFFL-204ENST00000414419 HOXD9P28356 352 aaPredicted RBP11.64□□□□□ -0.55
RFFL-204ENST00000414419 KLK7P49862 253 aa11.64□□□□□ -0.55
RFFL-204ENST00000414419 SLC6A3Q01959 620 aa11.64□□□□□ -0.55
RFFL-204ENST00000414419 STARD3Q14849 445 aa11.64□□□□□ -0.55
RFFL-204ENST00000414419 EIF4HQ15056 248 aaKnown RBP11.64□□□□□ -0.55
RFFL-204ENST00000414419 SYCP1Q15431 976 aa11.64□□□□□ -0.55
RFFL-204ENST00000414419 TAF5Q15542 800 aa11.64□□□□□ -0.55
RFFL-204ENST00000414419 GEN1Q17RS7 908 aa11.64□□□□□ -0.55
RFFL-204ENST00000414419 MPP7Q5T2T1 576 aa11.64□□□□□ -0.55
RFFL-204ENST00000414419 PIK3R6Q5UE93 754 aa11.64□□□□□ -0.55
RFFL-204ENST00000414419 RFWD3Q6PCD5 774 aa11.64□□□□□ -0.55
RFFL-204ENST00000414419 FAM183BPQ6ZVS7 135 aa11.64□□□□□ -0.55
RFFL-204ENST00000414419 KBTBD6Q86V97 674 aa11.64□□□□□ -0.55
RFFL-204ENST00000414419 DEFB106AQ8N104 65 aa11.64□□□□□ -0.55
RFFL-204ENST00000414419 ATP6V0D2Q8N8Y2 350 aa11.64□□□□□ -0.55
RFFL-204ENST00000414419 HJURPQ8NCD3 748 aaPredicted RBP11.64□□□□□ -0.55
RFFL-204ENST00000414419 PIWIL1Q96J94 861 aaKnown RBP11.64□□□□□ -0.55
RFFL-204ENST00000414419 ZC3H10Q96K80 434 aaKnown RBP11.64□□□□□ -0.55
RFFL-204ENST00000414419 FCRL2Q96LA5 508 aaPredicted RBP11.64□□□□□ -0.55
RFFL-204ENST00000414419 ACOX2Q99424 681 aa11.64□□□□□ -0.55
RFFL-204ENST00000414419 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.64□□□□□ -0.55
RFFL-204ENST00000414419 COX16Q9P0S2 106 aa11.64□□□□□ -0.55
RFFL-204ENST00000414419 STIM2Q9P246 746 aa11.64□□□□□ -0.55
RFFL-204ENST00000414419 TJP2Q9UDY2 1190 aa11.64□□□□□ -0.55
RFFL-204ENST00000414419 INVSQ9Y283 1065 aa11.64□□□□□ -0.55
RFFL-204ENST00000414419 GON4LQ3T8J9 2241 aa11.63□□□□□ -0.55
RFFL-204ENST00000414419 PLXND1Q9Y4D7 1925 aa11.63□□□□□ -0.55
RFFL-204ENST00000414419 DCLK1O15075 740 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 112.8 ms