RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 PCDHAC1Q9H158 963 aa5.86□□□□□ -1.47
CD47-201ENST00000355354 EBF2Q9HAK2 575 aa5.86□□□□□ -1.47
CD47-201ENST00000355354 LMCD1Q9NZU5 365 aa5.86□□□□□ -1.47
CD47-201ENST00000355354 RABGEF1Q9UJ41 708 aa5.86□□□□□ -1.47
CD47-201ENST00000355354 INVSQ9Y283 1065 aa5.86□□□□□ -1.47
CD47-201ENST00000355354 hCG_2014768A0A024R1R8 64 aa5.86□□□□□ -1.47
CD47-201ENST00000355354 OR51F1A6NGY5 319 aa5.86□□□□□ -1.47
CD47-201ENST00000355354 SERPING1P05155 500 aa5.86□□□□□ -1.47
CD47-201ENST00000355354 TFAP2AP05549 437 aa5.86□□□□□ -1.47
CD47-201ENST00000355354 C6orf222P0C671 652 aaPredicted RBP5.86□□□□□ -1.47
CD47-201ENST00000355354 AKAP5P24588 427 aa5.86□□□□□ -1.47
CD47-201ENST00000355354 PRDX3P30048 256 aaKnown RBP5.86□□□□□ -1.47
CD47-201ENST00000355354 CD68P34810 354 aaPredicted RBP5.86□□□□□ -1.47
CD47-201ENST00000355354 PLA2G5P39877 138 aa5.86□□□□□ -1.47
CD47-201ENST00000355354 RPS6KA1Q15418 735 aa5.86□□□□□ -1.47
CD47-201ENST00000355354 KCNA10Q16322 511 aa5.86□□□□□ -1.47
CD47-201ENST00000355354 TMEM207Q6UWW9 146 aa5.86□□□□□ -1.47
CD47-201ENST00000355354 ABI3BPQ7Z7G0 1075 aa5.86□□□□□ -1.47
CD47-201ENST00000355354 CACTIN-AS1Q8N1I8 211 aa5.86□□□□□ -1.47
CD47-201ENST00000355354 RNF175Q8N4F7 328 aa5.86□□□□□ -1.47
CD47-201ENST00000355354 LMBR1Q8WVP7 490 aa5.86□□□□□ -1.47
CD47-201ENST00000355354 MCEEQ96PE7 176 aa5.86□□□□□ -1.47
CD47-201ENST00000355354 C16orf70Q9BSU1 422 aa5.86□□□□□ -1.47
CD47-201ENST00000355354 FAM129AQ9BZQ8 928 aa5.86□□□□□ -1.47
CD47-201ENST00000355354 GALPQ9UBC7 116 aa5.86□□□□□ -1.47
CD47-201ENST00000355354 PTPRQQ9UMZ3 2332 aa5.86□□□□□ -1.47
CD47-201ENST00000355354 IGKV6D-21A0A0A0MT36 114 aa5.86□□□□□ -1.47
CD47-201ENST00000355354 PAPSS1O43252 624 aaPredicted RBP5.86□□□□□ -1.47
CD47-201ENST00000355354 NBNO60934 754 aa5.86□□□□□ -1.47
CD47-201ENST00000355354 H2AFZP0C0S5 128 aa5.86□□□□□ -1.47
CD47-201ENST00000355354 PIRTP0C851 137 aa5.86□□□□□ -1.47
CD47-201ENST00000355354 GNAT1P11488 350 aa5.86□□□□□ -1.47
CD47-201ENST00000355354 TPH1P17752 444 aa5.86□□□□□ -1.47
CD47-201ENST00000355354 COILP38432 576 aaPredicted RBP5.86□□□□□ -1.47
CD47-201ENST00000355354 PLK1P53350 603 aa5.86□□□□□ -1.47
CD47-201ENST00000355354 SLC25A11Q02978 314 aaKnown RBP5.86□□□□□ -1.47
CD47-201ENST00000355354 PGM5Q15124 567 aa5.86□□□□□ -1.47
CD47-201ENST00000355354 SLC10A6Q3KNW5 377 aa5.86□□□□□ -1.47
CD47-201ENST00000355354 SDHAF4Q5VUM1 108 aa5.86□□□□□ -1.47
CD47-201ENST00000355354 H2AFVQ71UI9 128 aa5.86□□□□□ -1.47
CD47-201ENST00000355354 WDR53Q7Z5U6 358 aaPredicted RBP5.86□□□□□ -1.47
CD47-201ENST00000355354 TRABD2AQ86V40 505 aa5.86□□□□□ -1.47
CD47-201ENST00000355354 PLD5Q8N7P1 536 aa5.86□□□□□ -1.47
CD47-201ENST00000355354 FAM71DQ8N9W8 422 aa5.86□□□□□ -1.47
CD47-201ENST00000355354 SPATA22Q8NHS9 363 aa5.86□□□□□ -1.47
CD47-201ENST00000355354 LINC01599Q8WXQ3 324 aa5.86□□□□□ -1.47
CD47-201ENST00000355354 FOXJ1Q92949 421 aa5.86□□□□□ -1.47
CD47-201ENST00000355354 WBP2Q969T9 261 aa5.86□□□□□ -1.47
CD47-201ENST00000355354 HOXC10Q9NYD6 342 aa5.86□□□□□ -1.47
CD47-201ENST00000355354 TK2O00142 265 aa5.86□□□□□ -1.47
CD47-201ENST00000355354 EXOC3O60645 756 aa5.86□□□□□ -1.47
CD47-201ENST00000355354 IL18RAPO95256 599 aa5.86□□□□□ -1.47
CD47-201ENST00000355354 MT-CYBP00156 380 aaPredicted RBP5.86□□□□□ -1.47
CD47-201ENST00000355354 BGNP21810 368 aa5.86□□□□□ -1.47
CD47-201ENST00000355354 ARNTP27540 789 aa5.86□□□□□ -1.47
CD47-201ENST00000355354 GTF2H1P32780 548 aa5.86□□□□□ -1.47
CD47-201ENST00000355354 CDKN2BP42772 138 aa5.86□□□□□ -1.47
CD47-201ENST00000355354 NT5C2P49902 561 aa5.86□□□□□ -1.47
CD47-201ENST00000355354 PTCHD3Q3KNS1 767 aa5.86□□□□□ -1.47
CD47-201ENST00000355354 SOWAHCQ53LP3 525 aaPredicted RBP5.86□□□□□ -1.47
CD47-201ENST00000355354 FAM180BQ6P0A1 224 aa5.86□□□□□ -1.47
CD47-201ENST00000355354 ZNF662Q6ZS27 426 aa5.86□□□□□ -1.47
CD47-201ENST00000355354 NT5DC4Q86YG4 428 aa5.86□□□□□ -1.47
CD47-201ENST00000355354 SPDYE1Q8NFV5 336 aaPredicted RBP5.86□□□□□ -1.47
CD47-201ENST00000355354 AGPAT1Q99943 283 aa5.86□□□□□ -1.47
CD47-201ENST00000355354 SLC13A1Q9BZW2 595 aa5.86□□□□□ -1.47
CD47-201ENST00000355354 ARMC7Q9H6L4 198 aa5.86□□□□□ -1.47
CD47-201ENST00000355354 ARHGEF3Q9NR81 526 aa5.86□□□□□ -1.47
CD47-201ENST00000355354 MIOSQ9NXC5 875 aa5.86□□□□□ -1.47
CD47-201ENST00000355354 DNM3Q9UQ16 869 aa5.86□□□□□ -1.47
CD47-201ENST00000355354 FARP1Q9Y4F1 1045 aaPredicted RBP5.86□□□□□ -1.47
CD47-201ENST00000355354 CORINQ9Y5Q5 1042 aa5.86□□□□□ -1.47
CD47-201ENST00000355354 TCRBV9S1A1TA0A576 114 aa5.85□□□□□ -1.47
CD47-201ENST00000355354 CDKL5O76039 1030 aa5.85□□□□□ -1.47
CD47-201ENST00000355354 ICAM1P05362 532 aa5.85□□□□□ -1.47
CD47-201ENST00000355354 BDNFP23560 247 aa5.85□□□□□ -1.47
CD47-201ENST00000355354 MFAP3P55082 362 aa5.85□□□□□ -1.47
CD47-201ENST00000355354 CREB5Q02930 508 aa5.85□□□□□ -1.47
CD47-201ENST00000355354 P3H1Q32P28 736 aa5.85□□□□□ -1.47
CD47-201ENST00000355354 KRT79Q5XKE5 535 aa5.85□□□□□ -1.47
CD47-201ENST00000355354 BHLHA9Q7RTU4 235 aa5.85□□□□□ -1.47
CD47-201ENST00000355354 HPS6Q86YV9 775 aa5.85□□□□□ -1.47
CD47-201ENST00000355354 MREGQ8N565 214 aa5.85□□□□□ -1.47
CD47-201ENST00000355354 CHST13Q8NET6 341 aa5.85□□□□□ -1.47
CD47-201ENST00000355354 TRIM58Q8NG06 486 aa5.85□□□□□ -1.47
CD47-201ENST00000355354 SORCS1Q8WY21 1168 aa5.85□□□□□ -1.47
CD47-201ENST00000355354 FBXL18Q96ME1 805 aa5.85□□□□□ -1.47
CD47-201ENST00000355354 SELENOSQ9BQE4 189 aa5.85□□□□□ -1.47
CD47-201ENST00000355354 ZBED2Q9BTP6 218 aa5.85□□□□□ -1.47
CD47-201ENST00000355354 IL23AQ9NPF7 189 aa5.85□□□□□ -1.47
CD47-201ENST00000355354 SLC6A13Q9NSD5 602 aa5.85□□□□□ -1.47
CD47-201ENST00000355354 TENM4Q6N022 2769 aa5.85□□□□□ -1.47
CD47-201ENST00000355354 PVALEFA0A1B0GWK0 134 aa5.85□□□□□ -1.47
CD47-201ENST00000355354 KRT13P13646 458 aa5.85□□□□□ -1.47
CD47-201ENST00000355354 NQO1P15559 274 aaKnown RBP5.85□□□□□ -1.47
CD47-201ENST00000355354 CYP2B6P20813 491 aa5.85□□□□□ -1.47
CD47-201ENST00000355354 MMP8P22894 467 aa5.85□□□□□ -1.47
CD47-201ENST00000355354 HOXA11P31270 313 aaPredicted RBP5.85□□□□□ -1.47
CD47-201ENST00000355354 PPP2R2AP63151 447 aa5.85□□□□□ -1.47
CD47-201ENST00000355354 TAP1Q03518 808 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms