RNA–Protein interactions for RNA: ENST00000278833.3

ROM1-201, Transcript of retinal outer segment membrane protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ROM1, Length 1,878 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-201ENST00000278833 ABHD16BQ9H3Z7 469 aa25.88■■□□□ 1.73
ROM1-201ENST00000278833 DPEP3Q9H4B8 488 aa25.88■■□□□ 1.73
ROM1-201ENST00000278833 DTLQ9NZJ0 730 aa25.88■■□□□ 1.73
ROM1-201ENST00000278833 DCTN4Q9UJW0 460 aa25.88■■□□□ 1.73
ROM1-201ENST00000278833 TSC2P49815 1807 aa25.88■■□□□ 1.73
ROM1-201ENST00000278833 XPO1O14980 1071 aaKnown RBP25.87■■□□□ 1.73
ROM1-201ENST00000278833 RECQL4O94761 1208 aa25.87■■□□□ 1.73
ROM1-201ENST00000278833 GNAZP19086 355 aa25.87■■□□□ 1.73
ROM1-201ENST00000278833 OVGP1Q12889 678 aa25.87■■□□□ 1.73
ROM1-201ENST00000278833 KIZQ2M2Z5 673 aa25.87■■□□□ 1.73
ROM1-201ENST00000278833 HEATR6Q6AI08 1181 aaKnown RBP25.87■■□□□ 1.73
ROM1-201ENST00000278833 C18orf25Q96B23 403 aaPredicted RBP25.87■■□□□ 1.73
ROM1-201ENST00000278833 MMADHCQ9H3L0 296 aaPredicted RBP25.87■■□□□ 1.73
ROM1-201ENST00000278833 FZD10Q9ULW2 581 aa25.87■■□□□ 1.73
ROM1-201ENST00000278833 NRCAMQ92823 1304 aa25.87■■□□□ 1.73
ROM1-201ENST00000278833 MATKP42679 507 aa25.87■■□□□ 1.73
ROM1-201ENST00000278833 FAM110CQ1W6H9 321 aa25.87■■□□□ 1.73
ROM1-201ENST00000278833 TEX44Q53QW1 395 aa25.87■■□□□ 1.73
ROM1-201ENST00000278833 ZNF296Q8WUU4 475 aaPredicted RBP25.87■■□□□ 1.73
ROM1-201ENST00000278833 NSL1Q96IY1 281 aa25.87■■□□□ 1.73
ROM1-201ENST00000278833 MAML3Q96JK9 1138 aa25.87■■□□□ 1.73
ROM1-201ENST00000278833 A0A0G2JND7 137 aa25.86■■□□□ 1.73
ROM1-201ENST00000278833 I3L4J1 428 aa25.86■■□□□ 1.73
ROM1-201ENST00000278833 EPHB2P29323 1055 aa25.86■■□□□ 1.73
ROM1-201ENST00000278833 LBX1P52954 281 aa25.86■■□□□ 1.73
ROM1-201ENST00000278833 OCRLQ01968 901 aa25.86■■□□□ 1.73
ROM1-201ENST00000278833 SP3Q02447 781 aa25.86■■□□□ 1.73
ROM1-201ENST00000278833 NBPF20Q3BBV1 942 aa25.86■■□□□ 1.73
ROM1-201ENST00000278833 CLEC4CQ8WTT0 213 aa25.86■■□□□ 1.73
ROM1-201ENST00000278833 TFB1MQ8WVM0 346 aaKnown RBP25.86■■□□□ 1.73
ROM1-201ENST00000278833 HTR3CQ8WXA8 447 aa25.86■■□□□ 1.73
ROM1-201ENST00000278833 N4BP2L2Q92802 583 aaPredicted RBP25.86■■□□□ 1.73
ROM1-201ENST00000278833 NT5C3BQ969T7 300 aa25.86■■□□□ 1.73
ROM1-201ENST00000278833 OXNAD1Q96HP4 312 aaPredicted RBP25.86■■□□□ 1.73
ROM1-201ENST00000278833 BTBD10Q9BSF8 475 aa25.86■■□□□ 1.73
ROM1-201ENST00000278833 CXorf56Q9H5V9 222 aa25.86■■□□□ 1.73
ROM1-201ENST00000278833 BATF3Q9NR55 127 aa25.86■■□□□ 1.73
ROM1-201ENST00000278833 KPNA7A9QM74 516 aa25.85■■□□□ 1.73
ROM1-201ENST00000278833 OPHN1O60890 802 aa25.85■■□□□ 1.73
ROM1-201ENST00000278833 SNNO75324 88 aaPredicted RBP25.85■■□□□ 1.73
ROM1-201ENST00000278833 F2P00734 622 aa25.85■■□□□ 1.73
ROM1-201ENST00000278833 WARSP23381 471 aaKnown RBP25.85■■□□□ 1.73
ROM1-201ENST00000278833 SLC25A52Q3SY17 297 aa25.85■■□□□ 1.73
ROM1-201ENST00000278833 CCDC185Q8N715 623 aa25.85■■□□□ 1.73
ROM1-201ENST00000278833 MIPEPQ99797 713 aa25.85■■□□□ 1.73
ROM1-201ENST00000278833 SIKE1Q9BRV8 207 aa25.85■■□□□ 1.73
ROM1-201ENST00000278833 NAT9Q9BTE0 207 aa25.85■■□□□ 1.73
ROM1-201ENST00000278833 GJD2Q9UKL4 321 aa25.85■■□□□ 1.73
ROM1-201ENST00000278833 HMX2A2RU54 273 aa25.85■■□□□ 1.73
ROM1-201ENST00000278833 CCDC130P13994 396 aa25.85■■□□□ 1.73
ROM1-201ENST00000278833 VAV1P15498 845 aa25.85■■□□□ 1.73
ROM1-201ENST00000278833 GNL1P36915 607 aaPredicted RBP25.85■■□□□ 1.73
ROM1-201ENST00000278833 ARL4AP40617 200 aa25.85■■□□□ 1.73
ROM1-201ENST00000278833 GLUD2P49448 558 aa25.85■■□□□ 1.73
ROM1-201ENST00000278833 NIPAL4Q0D2K0 466 aa25.85■■□□□ 1.73
ROM1-201ENST00000278833 SV2CQ496J9 727 aa25.85■■□□□ 1.73
ROM1-201ENST00000278833 LRRC8BQ6P9F7 803 aa25.85■■□□□ 1.73
ROM1-201ENST00000278833 TNIP3Q96KP6 325 aa25.85■■□□□ 1.73
ROM1-201ENST00000278833 NXF3Q9H4D5 531 aaKnown RBP25.85■■□□□ 1.73
ROM1-201ENST00000278833 SERPINB3P29508 390 aa25.84■■□□□ 1.73
ROM1-201ENST00000278833 TAF6P49848 677 aa25.84■■□□□ 1.73
ROM1-201ENST00000278833 ANKRD20A2Q5SQ80 823 aa25.84■■□□□ 1.73
ROM1-201ENST00000278833 SYCP2LQ5T4T6 812 aa25.84■■□□□ 1.73
ROM1-201ENST00000278833 ANKRD20A1Q5TYW2 823 aa25.84■■□□□ 1.73
ROM1-201ENST00000278833 ANKRD20A3Q5VUR7 823 aa25.84■■□□□ 1.73
ROM1-201ENST00000278833 KYAT3Q6YP21 454 aaKnown RBP25.84■■□□□ 1.73
ROM1-201ENST00000278833 TOP6BLQ8N6T0 577 aa25.84■■□□□ 1.73
ROM1-201ENST00000278833 E2F7Q96AV8 911 aa25.84■■□□□ 1.73
ROM1-201ENST00000278833 HNRNPABQ99729 332 aaKnown RBP25.84■■□□□ 1.73
ROM1-201ENST00000278833 SNX25Q9H3E2 840 aa25.84■■□□□ 1.73
ROM1-201ENST00000278833 SETD4Q9NVD3 440 aa25.84■■□□□ 1.73
ROM1-201ENST00000278833 ARL8BQ9NVJ2 186 aa25.84■■□□□ 1.73
ROM1-201ENST00000278833 CASP8AP2Q9UKL3 1982 aa25.84■■□□□ 1.73
ROM1-201ENST00000278833 DIAPH2O60879 1101 aa25.83■■□□□ 1.73
ROM1-201ENST00000278833 TPBGLP0DKB5 382 aa25.83■■□□□ 1.73
ROM1-201ENST00000278833 NEFHP12036 1026 aa25.83■■□□□ 1.73
ROM1-201ENST00000278833 C7orf31Q8N865 590 aa25.83■■□□□ 1.73
ROM1-201ENST00000278833 KCTD13Q8WZ19 329 aa25.83■■□□□ 1.73
ROM1-201ENST00000278833 TINF2Q9BSI4 451 aa25.83■■□□□ 1.73
ROM1-201ENST00000278833 ALG13Q9NP73 1137 aaKnown RBP25.83■■□□□ 1.73
ROM1-201ENST00000278833 SMIM28A0A1B0GU29 152 aa25.83■■□□□ 1.72
ROM1-201ENST00000278833 H3BRJ5 948 aa25.83■■□□□ 1.72
ROM1-201ENST00000278833 FKTNO75072 461 aa25.83■■□□□ 1.72
ROM1-201ENST00000278833 STK10O94804 968 aaKnown RBP25.83■■□□□ 1.72
ROM1-201ENST00000278833 BPGMP07738 259 aa25.83■■□□□ 1.72
ROM1-201ENST00000278833 ADORA2BP29275 332 aa25.83■■□□□ 1.72
ROM1-201ENST00000278833 ATXN1P54253 815 aaKnown RBP25.83■■□□□ 1.72
ROM1-201ENST00000278833 CAP1Q01518 475 aa25.83■■□□□ 1.72
ROM1-201ENST00000278833 BST1Q10588 318 aa25.83■■□□□ 1.72
ROM1-201ENST00000278833 OTUD1Q5VV17 481 aaPredicted RBP25.83■■□□□ 1.72
ROM1-201ENST00000278833 TRMT10BQ6PF06 316 aaKnown RBP25.83■■□□□ 1.72
ROM1-201ENST00000278833 GPR142Q7Z601 462 aa25.83■■□□□ 1.72
ROM1-201ENST00000278833 MPP5Q8N3R9 675 aa25.83■■□□□ 1.72
ROM1-201ENST00000278833 APPL2Q8NEU8 664 aa25.83■■□□□ 1.72
ROM1-201ENST00000278833 CADM1Q9BY67 442 aaKnown RBP25.83■■□□□ 1.72
ROM1-201ENST00000278833 ARHGEF4Q9NR80 690 aa25.83■■□□□ 1.72
ROM1-201ENST00000278833 RAD54BQ9Y620 910 aa25.83■■□□□ 1.72
ROM1-201ENST00000278833 PPP1R12AO14974 1030 aaPredicted RBP25.82■■□□□ 1.72
ROM1-201ENST00000278833 SMIM10L2AP0DMW4 78 aa25.82■■□□□ 1.72
ROM1-201ENST00000278833 SMIM10L2BP0DMW5 78 aa25.82■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms