RNA–Protein interactions for RNA: ENST00000267970.8

TSPAN3-201, Transcript of tetraspanin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN3, Length 6,467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-201ENST00000267970 DHFR2Q86XF0 187 aa17.21■□□□□ 0.34
TSPAN3-201ENST00000267970 MTMR8Q96EF0 704 aa17.21■□□□□ 0.34
TSPAN3-201ENST00000267970 RMND5BQ96G75 393 aaPredicted RBP17.21■□□□□ 0.34
TSPAN3-201ENST00000267970 SEC22BO75396 215 aa17.2■□□□□ 0.34
TSPAN3-201ENST00000267970 TTLL9Q3SXZ7 439 aa17.2■□□□□ 0.34
TSPAN3-201ENST00000267970 DPY30Q9C005 99 aa17.2■□□□□ 0.34
TSPAN3-201ENST00000267970 RGS18Q9NS28 235 aa17.2■□□□□ 0.34
TSPAN3-201ENST00000267970 TK2O00142 265 aa17.2■□□□□ 0.34
TSPAN3-201ENST00000267970 AKAP5P24588 427 aa17.2■□□□□ 0.34
TSPAN3-201ENST00000267970 ABATP80404 500 aa17.2■□□□□ 0.34
TSPAN3-201ENST00000267970 C16orf59Q7L2K0 433 aa17.2■□□□□ 0.34
TSPAN3-201ENST00000267970 SLC26A11Q86WA9 606 aa17.2■□□□□ 0.34
TSPAN3-201ENST00000267970 ZNF677Q86XU0 584 aa17.2■□□□□ 0.34
TSPAN3-201ENST00000267970 CIPCQ9C0C6 399 aa17.2■□□□□ 0.34
TSPAN3-201ENST00000267970 PPCSQ9HAB8 311 aa17.2■□□□□ 0.34
TSPAN3-201ENST00000267970 ERAP1Q9NZ08 941 aa17.2■□□□□ 0.34
TSPAN3-201ENST00000267970 AAR2Q9Y312 384 aaKnown RBP17.2■□□□□ 0.34
TSPAN3-201ENST00000267970 EIF2S1P05198 315 aaKnown RBP17.2■□□□□ 0.34
TSPAN3-201ENST00000267970 ODC1P11926 461 aa17.2■□□□□ 0.34
TSPAN3-201ENST00000267970 OXCT1P55809 520 aa17.2■□□□□ 0.34
TSPAN3-201ENST00000267970 SLC34A1Q06495 639 aa17.2■□□□□ 0.34
TSPAN3-201ENST00000267970 SDE2Q6IQ49 451 aa17.2■□□□□ 0.34
TSPAN3-201ENST00000267970 EFL1Q7Z2Z2 1120 aaKnown RBP17.2■□□□□ 0.34
TSPAN3-201ENST00000267970 TAF8Q7Z7C8 310 aa17.2■□□□□ 0.34
TSPAN3-201ENST00000267970 FANCEQ9HB96 536 aa17.2■□□□□ 0.34
TSPAN3-201ENST00000267970 KCNH4Q9UQ05 1017 aa17.2■□□□□ 0.34
TSPAN3-201ENST00000267970 ACOT9Q9Y305 439 aa17.2■□□□□ 0.34
TSPAN3-201ENST00000267970 LYVE1Q9Y5Y7 322 aa17.2■□□□□ 0.34
TSPAN3-201ENST00000267970 TPD52L2O43399 206 aaKnown RBP17.2■□□□□ 0.34
TSPAN3-201ENST00000267970 NUDT14O95848 222 aa17.2■□□□□ 0.34
TSPAN3-201ENST00000267970 STAG3L1P0CL83 205 aa17.2■□□□□ 0.34
TSPAN3-201ENST00000267970 HOXD10P28358 340 aa17.2■□□□□ 0.34
TSPAN3-201ENST00000267970 FAAP100Q0VG06 881 aa17.2■□□□□ 0.34
TSPAN3-201ENST00000267970 ACER1Q8TDN7 264 aa17.2■□□□□ 0.34
TSPAN3-201ENST00000267970 UBE2OQ9C0C9 1292 aaKnown RBP17.2■□□□□ 0.34
TSPAN3-201ENST00000267970 TTC37Q6PGP7 1564 aa17.2■□□□□ 0.34
TSPAN3-201ENST00000267970 AMPD1P23109 780 aa17.2■□□□□ 0.34
TSPAN3-201ENST00000267970 ITGA3P26006 1051 aa17.2■□□□□ 0.34
TSPAN3-201ENST00000267970 NPTX2P47972 431 aa17.2■□□□□ 0.34
TSPAN3-201ENST00000267970 HK2P52789 917 aa17.2■□□□□ 0.34
TSPAN3-201ENST00000267970 TRMT11Q7Z4G4 463 aaKnown RBP17.2■□□□□ 0.34
TSPAN3-201ENST00000267970 AFF2P51816 1311 aa17.2■□□□□ 0.34
TSPAN3-201ENST00000267970 KIAA0391O15091 583 aaKnown RBP17.19■□□□□ 0.34
TSPAN3-201ENST00000267970 PGM3O95394 542 aa17.19■□□□□ 0.34
TSPAN3-201ENST00000267970 CXCL8P10145 99 aa17.19■□□□□ 0.34
TSPAN3-201ENST00000267970 SLC11A2P49281 568 aa17.19■□□□□ 0.34
TSPAN3-201ENST00000267970 GIT2Q14161 759 aa17.19■□□□□ 0.34
TSPAN3-201ENST00000267970 AP5B1Q2VPB7 878 aa17.19■□□□□ 0.34
TSPAN3-201ENST00000267970 ZNF772Q68DY9 489 aaPredicted RBP17.19■□□□□ 0.34
TSPAN3-201ENST00000267970 PGBD2Q6P3X8 592 aa17.19■□□□□ 0.34
TSPAN3-201ENST00000267970 DET1Q7L5Y6 550 aa17.19■□□□□ 0.34
TSPAN3-201ENST00000267970 POLNQ7Z5Q5 900 aa17.19■□□□□ 0.34
TSPAN3-201ENST00000267970 KRCC1Q9NPI7 259 aaPredicted RBP17.19■□□□□ 0.34
TSPAN3-201ENST00000267970 POLE3Q9NRF9 147 aa17.19■□□□□ 0.34
TSPAN3-201ENST00000267970 SLC38A7Q9NVC3 462 aa17.19■□□□□ 0.34
TSPAN3-201ENST00000267970 BUD23O43709 281 aaKnown RBP17.19■□□□□ 0.34
TSPAN3-201ENST00000267970 AKAP3O75969 853 aa17.19■□□□□ 0.34
TSPAN3-201ENST00000267970 POMCP01189 267 aa17.19■□□□□ 0.34
TSPAN3-201ENST00000267970 MAGP20916 626 aa17.19■□□□□ 0.34
TSPAN3-201ENST00000267970 DENND6AQ8IWF6 608 aa17.19■□□□□ 0.34
TSPAN3-201ENST00000267970 NETO2Q8NC67 525 aa17.19■□□□□ 0.34
TSPAN3-201ENST00000267970 UMPSP11172 480 aa17.19■□□□□ 0.34
TSPAN3-201ENST00000267970 TNNI3P19429 210 aa17.19■□□□□ 0.34
TSPAN3-201ENST00000267970 FMO4P31512 558 aa17.19■□□□□ 0.34
TSPAN3-201ENST00000267970 STX4Q12846 297 aa17.19■□□□□ 0.34
TSPAN3-201ENST00000267970 FAM98BQ52LJ0 330 aaKnown RBP17.19■□□□□ 0.34
TSPAN3-201ENST00000267970 BOLA3Q53S33 107 aa17.19■□□□□ 0.34
TSPAN3-201ENST00000267970 ANKS6Q68DC2 871 aa17.19■□□□□ 0.34
TSPAN3-201ENST00000267970 KCNV1Q6PIU1 500 aa17.19■□□□□ 0.34
TSPAN3-201ENST00000267970 ATG14Q6ZNE5 492 aa17.19■□□□□ 0.34
TSPAN3-201ENST00000267970 RNF44Q7L0R7 432 aa17.19■□□□□ 0.34
TSPAN3-201ENST00000267970 SPATA6LQ8N4H0 392 aa17.19■□□□□ 0.34
TSPAN3-201ENST00000267970 TSEN2Q8NCE0 465 aaKnown RBP17.19■□□□□ 0.34
TSPAN3-201ENST00000267970 NFKBIZQ9BYH8 718 aa17.19■□□□□ 0.34
TSPAN3-201ENST00000267970 RHBGQ9H310 441 aa17.19■□□□□ 0.34
TSPAN3-201ENST00000267970 COG5Q9UP83 839 aa17.19■□□□□ 0.34
TSPAN3-201ENST00000267970 TIMM44O43615 452 aa17.19■□□□□ 0.34
TSPAN3-201ENST00000267970 NDUFA5Q16718 116 aa17.19■□□□□ 0.34
TSPAN3-201ENST00000267970 TKFCQ3LXA3 575 aa17.19■□□□□ 0.34
TSPAN3-201ENST00000267970 RNASE12Q5GAN4 147 aaKnown RBP17.19■□□□□ 0.34
TSPAN3-201ENST00000267970 CBWD3Q5JTY5 395 aa17.19■□□□□ 0.34
TSPAN3-201ENST00000267970 CBWD5Q5RIA9 395 aa17.19■□□□□ 0.34
TSPAN3-201ENST00000267970 RNF19BQ6ZMZ0 732 aa17.19■□□□□ 0.34
TSPAN3-201ENST00000267970 ILDR2Q71H61 639 aa17.19■□□□□ 0.34
TSPAN3-201ENST00000267970 FOXP3Q9BZS1 431 aa17.19■□□□□ 0.34
TSPAN3-201ENST00000267970 SHBGP04278 402 aa17.19■□□□□ 0.34
TSPAN3-201ENST00000267970 CDH8P55286 799 aa17.19■□□□□ 0.34
TSPAN3-201ENST00000267970 RHOAP61586 193 aa17.19■□□□□ 0.34
TSPAN3-201ENST00000267970 TRAF3Q13114 568 aa17.19■□□□□ 0.34
TSPAN3-201ENST00000267970 C1DQ13901 141 aaKnown RBP17.19■□□□□ 0.34
TSPAN3-201ENST00000267970 NPNTQ6UXI9 565 aa17.19■□□□□ 0.34
TSPAN3-201ENST00000267970 BRINP3Q76B58 766 aa17.19■□□□□ 0.34
TSPAN3-201ENST00000267970 EID3Q8N140 333 aa17.19■□□□□ 0.34
TSPAN3-201ENST00000267970 ZNF512BQ96KM6 892 aaPredicted RBP17.19■□□□□ 0.34
TSPAN3-201ENST00000267970 CISHQ9NSE2 258 aa17.19■□□□□ 0.34
TSPAN3-201ENST00000267970 MRPS7Q9Y2R9 242 aaKnown RBP17.19■□□□□ 0.34
TSPAN3-201ENST00000267970 NPY2RP49146 381 aa17.18■□□□□ 0.34
TSPAN3-201ENST00000267970 POM121L1PQ3SYA9 428 aa17.18■□□□□ 0.34
TSPAN3-201ENST00000267970 ARMC3Q5W041 872 aa17.18■□□□□ 0.34
TSPAN3-201ENST00000267970 ZNF621Q6ZSS3 439 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms