RNA–Protein interactions for RNA: ENST00000249064.8

CCDC117-201, Transcript of coiled-coil domain containing 117, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC117, Length 3,985 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC117-201ENST00000249064 FIZ1Q96SL8 496 aa13.68□□□□□ -0.22
CCDC117-201ENST00000249064 PIF1Q9H611 641 aa13.68□□□□□ -0.22
CCDC117-201ENST00000249064 POLR1BQ9H9Y6 1135 aa13.68□□□□□ -0.22
CCDC117-201ENST00000249064 AS3MTQ9HBK9 375 aa13.68□□□□□ -0.22
CCDC117-201ENST00000249064 ANKEF1Q9NU02 776 aa13.68□□□□□ -0.22
CCDC117-201ENST00000249064 NOCTQ9UK39 431 aaKnown RBP13.68□□□□□ -0.22
CCDC117-201ENST00000249064 GRID1Q9ULK0 1009 aa13.68□□□□□ -0.22
CCDC117-201ENST00000249064 PCDHGA4Q9Y5G9 962 aa13.68□□□□□ -0.22
CCDC117-201ENST00000249064 MYH4Q9Y623 1939 aa13.68□□□□□ -0.22
CCDC117-201ENST00000249064 KRT8P05787 483 aa13.68□□□□□ -0.22
CCDC117-201ENST00000249064 KRT3P12035 628 aa13.68□□□□□ -0.22
CCDC117-201ENST00000249064 SLC1A6P48664 564 aa13.68□□□□□ -0.22
CCDC117-201ENST00000249064 XKR3Q5GH77 459 aa13.68□□□□□ -0.22
CCDC117-201ENST00000249064 DCAF15Q66K64 600 aa13.68□□□□□ -0.22
CCDC117-201ENST00000249064 SLC26A11Q86WA9 606 aa13.68□□□□□ -0.22
CCDC117-201ENST00000249064 FAM172AQ8WUF8 416 aa13.68□□□□□ -0.22
CCDC117-201ENST00000249064 TRAPPC12Q8WVT3 735 aa13.68□□□□□ -0.22
CCDC117-201ENST00000249064 CIB1Q99828 191 aa13.68□□□□□ -0.22
CCDC117-201ENST00000249064 XPNPEP1Q9NQW7 623 aa13.68□□□□□ -0.22
CCDC117-201ENST00000249064 ABCA3Q99758 1704 aa13.67□□□□□ -0.22
CCDC117-201ENST00000249064 H0YCG3 227 aa13.67□□□□□ -0.22
CCDC117-201ENST00000249064 TAF4O00268 1085 aa13.67□□□□□ -0.22
CCDC117-201ENST00000249064 EXTL3O43909 919 aa13.67□□□□□ -0.22
CCDC117-201ENST00000249064 BCL10O95999 233 aa13.67□□□□□ -0.22
CCDC117-201ENST00000249064 HMGB2P26583 209 aaKnown RBP13.67□□□□□ -0.22
CCDC117-201ENST00000249064 HALP42357 657 aa13.67□□□□□ -0.22
CCDC117-201ENST00000249064 SLC15A2Q16348 729 aa13.67□□□□□ -0.22
CCDC117-201ENST00000249064 MYLK3Q32MK0 819 aa13.67□□□□□ -0.22
CCDC117-201ENST00000249064 SPDYE2Q495Y8 402 aa13.67□□□□□ -0.22
CCDC117-201ENST00000249064 N4BP2L1Q5TBK1 243 aaPredicted RBP13.67□□□□□ -0.22
CCDC117-201ENST00000249064 SLC9A9Q8IVB4 645 aa13.67□□□□□ -0.22
CCDC117-201ENST00000249064 ZNF606Q8WXB4 792 aa13.67□□□□□ -0.22
CCDC117-201ENST00000249064 COX4I2Q96KJ9 171 aa13.67□□□□□ -0.22
CCDC117-201ENST00000249064 EIF2AQ9BY44 585 aaKnown RBP13.67□□□□□ -0.22
CCDC117-201ENST00000249064 ZNF408Q9H9D4 720 aa13.67□□□□□ -0.22
CCDC117-201ENST00000249064 TIMMDC1Q9NPL8 285 aa13.67□□□□□ -0.22
CCDC117-201ENST00000249064 WDR70Q9NW82 654 aa13.67□□□□□ -0.22
CCDC117-201ENST00000249064 AKT3Q9Y243 479 aa13.67□□□□□ -0.22
CCDC117-201ENST00000249064 PARNO95453 639 aaKnown RBP13.67□□□□□ -0.22
CCDC117-201ENST00000249064 PABPC4LP0CB38 370 aaKnown RBP13.67□□□□□ -0.22
CCDC117-201ENST00000249064 TCF4P15884 667 aa13.67□□□□□ -0.22
CCDC117-201ENST00000249064 GNA12Q03113 381 aa13.67□□□□□ -0.22
CCDC117-201ENST00000249064 FAM102AQ5T9C2 384 aaPredicted RBP13.67□□□□□ -0.22
CCDC117-201ENST00000249064 TDRD10Q5VZ19 366 aaKnown RBP13.67□□□□□ -0.22
CCDC117-201ENST00000249064 STYK1Q6J9G0 422 aa13.67□□□□□ -0.22
CCDC117-201ENST00000249064 CES3Q6UWW8 571 aa13.67□□□□□ -0.22
CCDC117-201ENST00000249064 MRPS26Q9BYN8 205 aaKnown RBP13.67□□□□□ -0.22
CCDC117-201ENST00000249064 FOXP3Q9BZS1 431 aa13.67□□□□□ -0.22
CCDC117-201ENST00000249064 ADAMTS6Q9UKP5 1117 aa13.67□□□□□ -0.22
CCDC117-201ENST00000249064 POMPQ9Y244 141 aa13.67□□□□□ -0.22
CCDC117-201ENST00000249064 F8W8V4 182 aa13.67□□□□□ -0.22
CCDC117-201ENST00000249064 EGFRP00533 1210 aa13.67□□□□□ -0.22
CCDC117-201ENST00000249064 GJB1P08034 283 aa13.67□□□□□ -0.22
CCDC117-201ENST00000249064 DSG3P32926 999 aa13.67□□□□□ -0.22
CCDC117-201ENST00000249064 GNL1P36915 607 aaPredicted RBP13.67□□□□□ -0.22
CCDC117-201ENST00000249064 GARSP41250 739 aaKnown RBP13.67□□□□□ -0.22
CCDC117-201ENST00000249064 BCAR1P56945 870 aa13.67□□□□□ -0.22
CCDC117-201ENST00000249064 CRADDP78560 199 aa13.67□□□□□ -0.22
CCDC117-201ENST00000249064 OTUD3Q5T2D3 398 aaPredicted RBP13.67□□□□□ -0.22
CCDC117-201ENST00000249064 MAP4K3Q8IVH8 894 aa13.67□□□□□ -0.22
CCDC117-201ENST00000249064 FBXW8Q8N3Y1 598 aa13.67□□□□□ -0.22
CCDC117-201ENST00000249064 RYBPQ8N488 228 aaPredicted RBP13.67□□□□□ -0.22
CCDC117-201ENST00000249064 ZC3H15Q8WU90 426 aaKnown RBP13.67□□□□□ -0.22
CCDC117-201ENST00000249064 PPP1R13LQ8WUF5 828 aa13.67□□□□□ -0.22
CCDC117-201ENST00000249064 FAM136AQ96C01 138 aa13.67□□□□□ -0.22
CCDC117-201ENST00000249064 ANKRD36BP1Q96IX9 119 aa13.67□□□□□ -0.22
CCDC117-201ENST00000249064 TXLNGYQ9BZA5 131 aa13.67□□□□□ -0.22
CCDC117-201ENST00000249064 CDH22Q9UJ99 828 aa13.67□□□□□ -0.22
CCDC117-201ENST00000249064 EFR3BQ9Y2G0 817 aa13.67□□□□□ -0.22
CCDC117-201ENST00000249064 M0QYV0 167 aa13.66□□□□□ -0.22
CCDC117-201ENST00000249064 PRPSAP2O60256 369 aa13.66□□□□□ -0.22
CCDC117-201ENST00000249064 TNFSF9P41273 254 aa13.66□□□□□ -0.22
CCDC117-201ENST00000249064 STAT5BP51692 787 aa13.66□□□□□ -0.22
CCDC117-201ENST00000249064 PTK2BQ14289 1009 aa13.66□□□□□ -0.22
CCDC117-201ENST00000249064 ZNF667Q5HYK9 610 aa13.66□□□□□ -0.22
CCDC117-201ENST00000249064 ANKRD22Q5VYY1 191 aa13.66□□□□□ -0.22
CCDC117-201ENST00000249064 SLFN12LQ6IEE8 588 aa13.66□□□□□ -0.22
CCDC117-201ENST00000249064 ENOSF1Q7L5Y1 443 aa13.66□□□□□ -0.22
CCDC117-201ENST00000249064 ZNF354CQ86Y25 554 aa13.66□□□□□ -0.22
CCDC117-201ENST00000249064 CCDC103Q8IW40 242 aa13.66□□□□□ -0.22
CCDC117-201ENST00000249064 NAT16Q8N8M0 369 aa13.66□□□□□ -0.22
CCDC117-201ENST00000249064 LMO3Q8TAP4 145 aa13.66□□□□□ -0.22
CCDC117-201ENST00000249064 CRYGNQ8WXF5 182 aa13.66□□□□□ -0.22
CCDC117-201ENST00000249064 DGCR6LQ9BY27 220 aa13.66□□□□□ -0.22
CCDC117-201ENST00000249064 ACAD9Q9H845 621 aa13.66□□□□□ -0.22
CCDC117-201ENST00000249064 GPATCH2LQ9NWQ4 482 aa13.66□□□□□ -0.22
CCDC117-201ENST00000249064 M0R3G1 203 aa13.66□□□□□ -0.22
CCDC117-201ENST00000249064 PRPF4O43172 522 aaKnown RBP eCLIP13.66□□□□□ -0.22
CCDC117-201ENST00000249064 CRTAMO95727 393 aa13.66□□□□□ -0.22
CCDC117-201ENST00000249064 TOP3BO95985 862 aaKnown RBP13.66□□□□□ -0.22
CCDC117-201ENST00000249064 CYP1A2P05177 515 aa13.66□□□□□ -0.22
CCDC117-201ENST00000249064 BNIP3Q12983 259 aa13.66□□□□□ -0.22
CCDC117-201ENST00000249064 BNIPLQ7Z465 357 aa13.66□□□□□ -0.22
CCDC117-201ENST00000249064 ZC3H3Q8IXZ2 948 aaKnown RBP13.66□□□□□ -0.22
CCDC117-201ENST00000249064 ZNF398Q8TD17 642 aa13.66□□□□□ -0.22
CCDC117-201ENST00000249064 SERAC1Q96JX3 654 aa13.66□□□□□ -0.22
CCDC117-201ENST00000249064 NACA2Q9H009 215 aa13.66□□□□□ -0.22
CCDC117-201ENST00000249064 PCDH18Q9HCL0 1135 aa13.66□□□□□ -0.22
CCDC117-201ENST00000249064 TRIM39Q9HCM9 518 aa13.66□□□□□ -0.22
CCDC117-201ENST00000249064 AP4S1Q9Y587 144 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms