RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 H3BQF6 201 aa18.77■□□□□ 0.6
VIM-201ENST00000224237 I6L893 689 aaPredicted RBP18.77■□□□□ 0.6
VIM-201ENST00000224237 RARGP13631 454 aa18.77■□□□□ 0.6
VIM-201ENST00000224237 SYN1P17600 705 aa18.77■□□□□ 0.6
VIM-201ENST00000224237 HCAR3P49019 387 aa18.77■□□□□ 0.6
VIM-201ENST00000224237 GLUD2P49448 558 aa18.77■□□□□ 0.6
VIM-201ENST00000224237 PGFP49763 221 aa18.77■□□□□ 0.6
VIM-201ENST00000224237 GBE1Q04446 702 aa18.77■□□□□ 0.6
VIM-201ENST00000224237 DPYSQ14117 519 aa18.77■□□□□ 0.6
VIM-201ENST00000224237 CDKL3Q8IVW4 592 aaPredicted RBP18.77■□□□□ 0.6
VIM-201ENST00000224237 GPR152Q8TDT2 470 aa18.77■□□□□ 0.6
VIM-201ENST00000224237 CASP10Q92851 521 aa18.77■□□□□ 0.6
VIM-201ENST00000224237 FBXO32Q969P5 355 aa18.77■□□□□ 0.6
VIM-201ENST00000224237 SERPINB11Q96P15 392 aa18.77■□□□□ 0.6
VIM-201ENST00000224237 FOXP3Q9BZS1 431 aa18.77■□□□□ 0.6
VIM-201ENST00000224237 ADAM7Q9H2U9 754 aa18.77■□□□□ 0.6
VIM-201ENST00000224237 ARHGEF38Q9NXL2 777 aa18.77■□□□□ 0.6
VIM-201ENST00000224237 GMIPQ9P107 970 aa18.77■□□□□ 0.6
VIM-201ENST00000224237 KIAA1671Q9BY89 1806 aa18.77■□□□□ 0.6
VIM-201ENST00000224237 OPA1O60313 960 aa18.77■□□□□ 0.6
VIM-201ENST00000224237 SYF2O95926 243 aaKnown RBP18.77■□□□□ 0.6
VIM-201ENST00000224237 CCR1P32246 355 aa18.77■□□□□ 0.6
VIM-201ENST00000224237 PPM1AP35813 382 aa18.77■□□□□ 0.6
VIM-201ENST00000224237 TUFMP49411 452 aaKnown RBP18.77■□□□□ 0.6
VIM-201ENST00000224237 TPI1P60174 286 aa18.77■□□□□ 0.6
VIM-201ENST00000224237 FPGSQ05932 587 aa18.77■□□□□ 0.6
VIM-201ENST00000224237 MORF4L2Q15014 288 aa18.77■□□□□ 0.6
VIM-201ENST00000224237 MSANTD2Q6P1R3 559 aa18.77■□□□□ 0.6
VIM-201ENST00000224237 LRIG3Q6UXM1 1119 aa18.77■□□□□ 0.6
VIM-201ENST00000224237 CEP128Q6ZU80 1094 aa18.77■□□□□ 0.6
VIM-201ENST00000224237 GOLGA6L1Q8N7Z2 621 aa18.77■□□□□ 0.6
VIM-201ENST00000224237 RTP4Q96DX8 246 aa18.77■□□□□ 0.6
VIM-201ENST00000224237 EPAS1Q99814 870 aa18.77■□□□□ 0.6
VIM-201ENST00000224237 PABPC3Q9H361 631 aaKnown RBP18.77■□□□□ 0.6
VIM-201ENST00000224237 TLR8Q9NR97 1041 aaKnown RBP18.77■□□□□ 0.6
VIM-201ENST00000224237 OSER1Q9NX31 292 aa18.77■□□□□ 0.6
VIM-201ENST00000224237 CLIC5Q9NZA1 410 aa18.77■□□□□ 0.6
VIM-201ENST00000224237 DTLQ9NZJ0 730 aa18.77■□□□□ 0.6
VIM-201ENST00000224237 HSFX1Q9UBD0 423 aa18.77■□□□□ 0.6
VIM-201ENST00000224237 AFF4Q9UHB7 1163 aaKnown RBP18.77■□□□□ 0.6
VIM-201ENST00000224237 PLAAQ9Y263 795 aa18.77■□□□□ 0.6
VIM-201ENST00000224237 GREB1Q4ZG55 1949 aa18.77■□□□□ 0.59
VIM-201ENST00000224237 ZNF638Q14966 1978 aaKnown RBP18.77■□□□□ 0.59
VIM-201ENST00000224237 FGBP02675 491 aa18.76■□□□□ 0.59
VIM-201ENST00000224237 ACTN2P35609 894 aa18.76■□□□□ 0.59
VIM-201ENST00000224237 DDX53Q86TM3 631 aaKnown RBP18.76■□□□□ 0.59
VIM-201ENST00000224237 CCDC25Q86WR0 208 aa18.76■□□□□ 0.59
VIM-201ENST00000224237 OLFM3Q96PB7 478 aa18.76■□□□□ 0.59
VIM-201ENST00000224237 SH3GL2Q99962 352 aa18.76■□□□□ 0.59
VIM-201ENST00000224237 CLSTN3Q9BQT9 956 aa18.76■□□□□ 0.59
VIM-201ENST00000224237 AAASQ9NRG9 546 aa18.76■□□□□ 0.59
VIM-201ENST00000224237 ETNK2Q9NVF9 386 aa18.76■□□□□ 0.59
VIM-201ENST00000224237 OR12D3Q9UGF7 316 aa18.76■□□□□ 0.59
VIM-201ENST00000224237 SFMBT1Q9UHJ3 866 aa18.76■□□□□ 0.59
VIM-201ENST00000224237 SHOC2Q9UQ13 582 aa18.76■□□□□ 0.59
VIM-201ENST00000224237 FAM72CH0Y354 149 aa18.75■□□□□ 0.59
VIM-201ENST00000224237 DCLK1O15075 740 aa18.75■□□□□ 0.59
VIM-201ENST00000224237 KCNN4O15554 427 aa18.75■□□□□ 0.59
VIM-201ENST00000224237 MAP3K6O95382 1288 aa18.75■□□□□ 0.59
VIM-201ENST00000224237 URODP06132 367 aa18.75■□□□□ 0.59
VIM-201ENST00000224237 ATF6P18850 670 aa18.75■□□□□ 0.59
VIM-201ENST00000224237 RPL22P35268 128 aaKnown RBP18.75■□□□□ 0.59
VIM-201ENST00000224237 SLC10A2Q12908 348 aaPredicted RBP18.75■□□□□ 0.59
VIM-201ENST00000224237 PPP2R5DQ14738 602 aa18.75■□□□□ 0.59
VIM-201ENST00000224237 PAFAH1B3Q15102 231 aaKnown RBP18.75■□□□□ 0.59
VIM-201ENST00000224237 TERF2Q15554 542 aa18.75■□□□□ 0.59
VIM-201ENST00000224237 SLC45A4Q5BKX6 768 aa18.75■□□□□ 0.59
VIM-201ENST00000224237 RNASEH2BQ5TBB1 312 aaKnown RBP18.75■□□□□ 0.59
VIM-201ENST00000224237 FAM72AQ5TYM5 149 aa18.75■□□□□ 0.59
VIM-201ENST00000224237 TPGS2Q68CL5 300 aa18.75■□□□□ 0.59
VIM-201ENST00000224237 FAM72DQ6L9T8 149 aa18.75■□□□□ 0.59
VIM-201ENST00000224237 FAM72BQ86X60 149 aa18.75■□□□□ 0.59
VIM-201ENST00000224237 ZNF461Q8TAF7 563 aa18.75■□□□□ 0.59
VIM-201ENST00000224237 ZBTB9Q96C00 473 aa18.75■□□□□ 0.59
VIM-201ENST00000224237 HAPLN3Q96S86 360 aa18.75■□□□□ 0.59
VIM-201ENST00000224237 OSBPL2Q9H1P3 480 aa18.75■□□□□ 0.59
VIM-201ENST00000224237 USP29Q9HBJ7 922 aa18.75■□□□□ 0.59
VIM-201ENST00000224237 OLA1Q9NTK5 396 aaKnown RBP18.75■□□□□ 0.59
VIM-201ENST00000224237 STK39Q9UEW8 545 aa18.75■□□□□ 0.59
VIM-201ENST00000224237 HACD1B0YJ81 288 aa18.75■□□□□ 0.59
VIM-201ENST00000224237 MFSD11O43934 449 aa18.75■□□□□ 0.59
VIM-201ENST00000224237 GJB5O95377 273 aa18.75■□□□□ 0.59
VIM-201ENST00000224237 RBL1P28749 1068 aa18.75■□□□□ 0.59
VIM-201ENST00000224237 CHKAP35790 457 aa18.75■□□□□ 0.59
VIM-201ENST00000224237 TAF10Q12962 218 aa18.75■□□□□ 0.59
VIM-201ENST00000224237 TMEM240Q5SV17 173 aa18.75■□□□□ 0.59
VIM-201ENST00000224237 PDZD4Q76G19 769 aaPredicted RBP18.75■□□□□ 0.59
VIM-201ENST00000224237 ZCCHC9Q8N567 271 aaKnown RBP18.75■□□□□ 0.59
VIM-201ENST00000224237 QKIQ96PU8 341 aaKnown RBP eCLIP18.75■□□□□ 0.59
VIM-201ENST00000224237 FARP1Q9Y4F1 1045 aaPredicted RBP18.75■□□□□ 0.59
VIM-201ENST00000224237 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.74■□□□□ 0.59
VIM-201ENST00000224237 SMAPO00193 183 aa18.74■□□□□ 0.59
VIM-201ENST00000224237 MSI1O43347 362 aaKnown RBP18.74■□□□□ 0.59
VIM-201ENST00000224237 ABLIM3O94929 683 aa18.74■□□□□ 0.59
VIM-201ENST00000224237 ERCC2P18074 760 aa18.74■□□□□ 0.59
VIM-201ENST00000224237 DENND2CQ68D51 928 aa18.74■□□□□ 0.59
VIM-201ENST00000224237 TRMT10CQ7L0Y3 403 aaKnown RBP18.74■□□□□ 0.59
VIM-201ENST00000224237 HOOK3Q86VS8 718 aa18.74■□□□□ 0.59
VIM-201ENST00000224237 PPIL6Q8IXY8 311 aa18.74■□□□□ 0.59
VIM-201ENST00000224237 TTLL2Q9BWV7 592 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms