RNA–Protein interactions for RNA: ENST00000626109.1

LINC00538-201, long intergenic non-protein coding RNA 538, humanhuman

BASIC

Gene LINC00538, Length 1,906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00538-201ENST00000626109 DNAJC12Q9UKB3 198 aa12.06□□□□□ -0.48
LINC00538-201ENST00000626109 STXBP5LQ9Y2K9 1186 aa12.06□□□□□ -0.48
LINC00538-201ENST00000626109 NDUFAB1O14561 156 aa12.05□□□□□ -0.48
LINC00538-201ENST00000626109 ZNF623O75123 536 aa12.05□□□□□ -0.48
LINC00538-201ENST00000626109 CLTAP09496 248 aa12.05□□□□□ -0.48
LINC00538-201ENST00000626109 STAG3L1P0CL83 205 aa12.05□□□□□ -0.48
LINC00538-201ENST00000626109 ZNF24P17028 368 aa12.05□□□□□ -0.48
LINC00538-201ENST00000626109 YARSP54577 528 aaKnown RBP12.05□□□□□ -0.48
LINC00538-201ENST00000626109 DRAP1Q14919 205 aaPredicted RBP12.05□□□□□ -0.48
LINC00538-201ENST00000626109 PDCD2Q16342 344 aaPredicted RBP12.05□□□□□ -0.48
LINC00538-201ENST00000626109 SNRNP35Q16560 246 aaKnown RBP12.05□□□□□ -0.48
LINC00538-201ENST00000626109 TCTN1Q2MV58 587 aa12.05□□□□□ -0.48
LINC00538-201ENST00000626109 SEZ6Q53EL9 994 aa12.05□□□□□ -0.48
LINC00538-201ENST00000626109 CEP85LQ5SZL2 805 aa12.05□□□□□ -0.48
LINC00538-201ENST00000626109 LIN54Q6MZP7 749 aa12.05□□□□□ -0.48
LINC00538-201ENST00000626109 RTN4RL1Q86UN2 441 aaPredicted RBP12.05□□□□□ -0.48
LINC00538-201ENST00000626109 HEATR4Q86WZ0 1026 aa12.05□□□□□ -0.48
LINC00538-201ENST00000626109 ECHDC2Q86YB7 292 aa12.05□□□□□ -0.48
LINC00538-201ENST00000626109 RDH13Q8NBN7 331 aa12.05□□□□□ -0.48
LINC00538-201ENST00000626109 VWCEQ96DN2 955 aa12.05□□□□□ -0.48
LINC00538-201ENST00000626109 FBXL18Q96ME1 805 aa12.05□□□□□ -0.48
LINC00538-201ENST00000626109 ACAP3Q96P50 834 aa12.05□□□□□ -0.48
LINC00538-201ENST00000626109 APOL6Q9BWW8 343 aa12.05□□□□□ -0.48
LINC00538-201ENST00000626109 EPN3Q9H201 632 aa12.05□□□□□ -0.48
LINC00538-201ENST00000626109 RPF1Q9H9Y2 349 aaKnown RBP12.05□□□□□ -0.48
LINC00538-201ENST00000626109 CPSF3Q9UKF6 684 aaKnown RBP12.05□□□□□ -0.48
LINC00538-201ENST00000626109 TMEM98Q9Y2Y6 226 aa12.05□□□□□ -0.48
LINC00538-201ENST00000626109 NCANO14594 1321 aa12.05□□□□□ -0.48
LINC00538-201ENST00000626109 ZSCAN5CA6NGD5 496 aaPredicted RBP12.05□□□□□ -0.48
LINC00538-201ENST00000626109 TBKBP1A7MCY6 615 aa12.05□□□□□ -0.48
LINC00538-201ENST00000626109 MAPK13O15264 365 aa12.05□□□□□ -0.48
LINC00538-201ENST00000626109 FAM189A1O60320 539 aa12.05□□□□□ -0.48
LINC00538-201ENST00000626109 GJB6O95452 261 aa12.05□□□□□ -0.48
LINC00538-201ENST00000626109 FGBP02675 491 aa12.05□□□□□ -0.48
LINC00538-201ENST00000626109 ITGA4P13612 1032 aa12.05□□□□□ -0.48
LINC00538-201ENST00000626109 TNFSF9P41273 254 aa12.05□□□□□ -0.48
LINC00538-201ENST00000626109 CDR1P51861 262 aa12.05□□□□□ -0.48
LINC00538-201ENST00000626109 SKIDA1Q1XH10 827 aa12.05□□□□□ -0.48
LINC00538-201ENST00000626109 ZBTB41Q5SVQ8 909 aa12.05□□□□□ -0.48
LINC00538-201ENST00000626109 KCTD16Q68DU8 428 aa12.05□□□□□ -0.48
LINC00538-201ENST00000626109 CCDC80Q76M96 950 aa12.05□□□□□ -0.48
LINC00538-201ENST00000626109 LRRTM3Q86VH5 581 aa12.05□□□□□ -0.48
LINC00538-201ENST00000626109 CBWD2Q8IUF1 395 aa12.05□□□□□ -0.48
LINC00538-201ENST00000626109 RHOT2Q8IXI1 618 aa12.05□□□□□ -0.48
LINC00538-201ENST00000626109 RNF169Q8NCN4 708 aa12.05□□□□□ -0.48
LINC00538-201ENST00000626109 SMG8Q8ND04 991 aaKnown RBP12.05□□□□□ -0.48
LINC00538-201ENST00000626109 ZSWIM2Q8NEG5 633 aa12.05□□□□□ -0.48
LINC00538-201ENST00000626109 SLC35G2Q8TBE7 412 aa12.05□□□□□ -0.48
LINC00538-201ENST00000626109 INTS2Q9H0H0 1204 aaKnown RBP12.05□□□□□ -0.48
LINC00538-201ENST00000626109 PLEKHA4Q9H4M7 779 aa12.05□□□□□ -0.48
LINC00538-201ENST00000626109 TMBIM4Q9HC24 238 aa12.05□□□□□ -0.48
LINC00538-201ENST00000626109 RBAKQ9NYW8 714 aaPredicted RBP12.05□□□□□ -0.48
LINC00538-201ENST00000626109 ACTR10Q9NZ32 417 aa12.05□□□□□ -0.48
LINC00538-201ENST00000626109 APEX2Q9UBZ4 518 aa12.05□□□□□ -0.48
LINC00538-201ENST00000626109 LRFN2Q9ULH4 789 aa12.05□□□□□ -0.48
LINC00538-201ENST00000626109 HES2Q9Y543 173 aa12.05□□□□□ -0.48
LINC00538-201ENST00000626109 ATXN2Q99700 1313 aaKnown RBP12.05□□□□□ -0.48
LINC00538-201ENST00000626109 DNAH12Q6ZR08 3092 aa12.05□□□□□ -0.48
LINC00538-201ENST00000626109 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.04□□□□□ -0.48
LINC00538-201ENST00000626109 B9A039 149 aa12.04□□□□□ -0.48
LINC00538-201ENST00000626109 RECQL4O94761 1208 aa12.04□□□□□ -0.48
LINC00538-201ENST00000626109 EOMESO95936 686 aa12.04□□□□□ -0.48
LINC00538-201ENST00000626109 AMHP03971 560 aa12.04□□□□□ -0.48
LINC00538-201ENST00000626109 MYL7Q01449 175 aa12.04□□□□□ -0.48
LINC00538-201ENST00000626109 LAPTM5Q13571 262 aa12.04□□□□□ -0.48
LINC00538-201ENST00000626109 SYDE1Q6ZW31 735 aaPredicted RBP12.04□□□□□ -0.48
LINC00538-201ENST00000626109 ZNF365Q70YC5 407 aa12.04□□□□□ -0.48
LINC00538-201ENST00000626109 MRPL10Q7Z7H8 261 aaKnown RBP12.04□□□□□ -0.48
LINC00538-201ENST00000626109 LRRC49Q8IUZ0 686 aa12.04□□□□□ -0.48
LINC00538-201ENST00000626109 CBARPQ8N350 705 aaPredicted RBP12.04□□□□□ -0.48
LINC00538-201ENST00000626109 IL17RDQ8NFM7 739 aa12.04□□□□□ -0.48
LINC00538-201ENST00000626109 CCDC114Q96M63 670 aa12.04□□□□□ -0.48
LINC00538-201ENST00000626109 MTIF3Q9H2K0 278 aaKnown RBP12.04□□□□□ -0.48
LINC00538-201ENST00000626109 UBN1Q9NPG3 1134 aa12.04□□□□□ -0.48
LINC00538-201ENST00000626109 TMEM161AQ9NX61 479 aa12.04□□□□□ -0.48
LINC00538-201ENST00000626109 FAM169AQ9Y6X4 670 aa12.04□□□□□ -0.48
LINC00538-201ENST00000626109 ADRB2P07550 413 aa12.03□□□□□ -0.48
LINC00538-201ENST00000626109 CXCL8P10145 99 aa12.03□□□□□ -0.48
LINC00538-201ENST00000626109 AKAP5P24588 427 aa12.03□□□□□ -0.48
LINC00538-201ENST00000626109 HSD17B3P37058 310 aa12.03□□□□□ -0.48
LINC00538-201ENST00000626109 ADH7P40394 386 aa12.03□□□□□ -0.48
LINC00538-201ENST00000626109 MDH1P40925 334 aaKnown RBP12.03□□□□□ -0.48
LINC00538-201ENST00000626109 RGS19P49795 217 aa12.03□□□□□ -0.48
LINC00538-201ENST00000626109 EIF3BP55884 814 aaKnown RBP12.03□□□□□ -0.48
LINC00538-201ENST00000626109 FAM189BP81408 668 aa12.03□□□□□ -0.48
LINC00538-201ENST00000626109 SURF1Q15526 300 aa12.03□□□□□ -0.48
LINC00538-201ENST00000626109 RNF219Q5W0B1 726 aaPredicted RBP12.03□□□□□ -0.48
LINC00538-201ENST00000626109 CRELD2Q6UXH1 353 aaPredicted RBP12.03□□□□□ -0.48
LINC00538-201ENST00000626109 INTS8Q75QN2 995 aaKnown RBP12.03□□□□□ -0.48
LINC00538-201ENST00000626109 OTOP2Q7RTS6 562 aa12.03□□□□□ -0.48
LINC00538-201ENST00000626109 USP37Q86T82 979 aa12.03□□□□□ -0.48
LINC00538-201ENST00000626109 TADA2BQ86TJ2 420 aa12.03□□□□□ -0.48
LINC00538-201ENST00000626109 TMEM192Q8IY95 271 aa12.03□□□□□ -0.48
LINC00538-201ENST00000626109 UBL4BQ8N7F7 174 aa12.03□□□□□ -0.48
LINC00538-201ENST00000626109 C3orf20Q8ND61 904 aa12.03□□□□□ -0.48
LINC00538-201ENST00000626109 CCDC138Q96M89 665 aa12.03□□□□□ -0.48
LINC00538-201ENST00000626109 DHRS4Q9BTZ2 278 aa12.03□□□□□ -0.48
LINC00538-201ENST00000626109 CARD9Q9H257 536 aa12.03□□□□□ -0.48
LINC00538-201ENST00000626109 TRPV4Q9HBA0 871 aa12.03□□□□□ -0.48
LINC00538-201ENST00000626109 HPF1Q9NWY4 346 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms