RNA–Protein interactions for RNA: ENST00000610756.4

TCF3-219, Transcript of transcription factor 3, humanhuman

TSL 1 (best)

Gene TCF3, Length 1,343 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-219ENST00000610756 PRR23BQ6ZRT6 265 aa20.12■□□□□ 0.81
TCF3-219ENST00000610756 C11orf57Q6ZUT1 292 aaPredicted RBP20.12■□□□□ 0.81
TCF3-219ENST00000610756 TRMT11Q7Z4G4 463 aaKnown RBP20.12■□□□□ 0.81
TCF3-219ENST00000610756 SLC47A2Q86VL8 602 aa20.12■□□□□ 0.81
TCF3-219ENST00000610756 UNC45BQ8IWX7 931 aa20.12■□□□□ 0.81
TCF3-219ENST00000610756 GPR161Q8N6U8 529 aaKnown RBP20.12■□□□□ 0.81
TCF3-219ENST00000610756 TSTD1Q8NFU3 115 aa20.12■□□□□ 0.81
TCF3-219ENST00000610756 BHMTQ93088 406 aa20.12■□□□□ 0.81
TCF3-219ENST00000610756 AZIN2Q96A70 460 aa20.12■□□□□ 0.81
TCF3-219ENST00000610756 HINFPQ9BQA5 517 aa20.12■□□□□ 0.81
TCF3-219ENST00000610756 TRIM62Q9BVG3 475 aa20.12■□□□□ 0.81
TCF3-219ENST00000610756 VPS16Q9H269 839 aa20.12■□□□□ 0.81
TCF3-219ENST00000610756 PLCB1Q9NQ66 1216 aa20.12■□□□□ 0.81
TCF3-219ENST00000610756 TAB2Q9NYJ8 693 aa20.12■□□□□ 0.81
TCF3-219ENST00000610756 LRRC10BA6NIK2 292 aa20.11■□□□□ 0.81
TCF3-219ENST00000610756 E5RJQ4 531 aa20.11■□□□□ 0.81
TCF3-219ENST00000610756 SGK1O00141 431 aa20.11■□□□□ 0.81
TCF3-219ENST00000610756 GFRA2O00451 464 aa20.11■□□□□ 0.81
TCF3-219ENST00000610756 ADAM23O75077 832 aa20.11■□□□□ 0.81
TCF3-219ENST00000610756 RPP40O75818 363 aaKnown RBP20.11■□□□□ 0.81
TCF3-219ENST00000610756 UCHL3P15374 230 aa20.11■□□□□ 0.81
TCF3-219ENST00000610756 ZNF445P59923 1031 aa20.11■□□□□ 0.81
TCF3-219ENST00000610756 YWHAZP63104 245 aaKnown RBP20.11■□□□□ 0.81
TCF3-219ENST00000610756 MPPE1Q53F39 396 aa20.11■□□□□ 0.81
TCF3-219ENST00000610756 TOGARAM2Q6ZUX3 1019 aa20.11■□□□□ 0.81
TCF3-219ENST00000610756 CEP68Q76N32 757 aa20.11■□□□□ 0.81
TCF3-219ENST00000610756 RASSF3Q86WH2 238 aa20.11■□□□□ 0.81
TCF3-219ENST00000610756 ZNF513Q8N8E2 541 aaPredicted RBP20.11■□□□□ 0.81
TCF3-219ENST00000610756 PPP1R13BQ96KQ4 1090 aa20.11■□□□□ 0.81
TCF3-219ENST00000610756 STK33Q9BYT3 514 aa20.11■□□□□ 0.81
TCF3-219ENST00000610756 SLC2A11Q9BYW1 496 aa20.11■□□□□ 0.81
TCF3-219ENST00000610756 HCN2Q9UL51 889 aa20.11■□□□□ 0.81
TCF3-219ENST00000610756 NAALADL1Q9UQQ1 740 aa20.11■□□□□ 0.81
TCF3-219ENST00000610756 PRRT4C9JH25 899 aa20.1■□□□□ 0.81
TCF3-219ENST00000610756 MSI1O43347 362 aaKnown RBP20.1■□□□□ 0.81
TCF3-219ENST00000610756 RETP07949 1114 aa20.1■□□□□ 0.81
TCF3-219ENST00000610756 TPM2P07951 284 aa20.1■□□□□ 0.81
TCF3-219ENST00000610756 TBX4P57082 545 aa20.1■□□□□ 0.81
TCF3-219ENST00000610756 MYL5Q02045 173 aa20.1■□□□□ 0.81
TCF3-219ENST00000610756 NNTQ13423 1086 aa20.1■□□□□ 0.81
TCF3-219ENST00000610756 LPAL2Q16609 132 aa20.1■□□□□ 0.81
TCF3-219ENST00000610756 NUGGCQ68CJ6 796 aa20.1■□□□□ 0.81
TCF3-219ENST00000610756 CACNA2D4Q7Z3S7 1137 aa20.1■□□□□ 0.81
TCF3-219ENST00000610756 DDI1Q8WTU0 396 aa20.1■□□□□ 0.81
TCF3-219ENST00000610756 FAM149B1Q96BN6 582 aa20.1■□□□□ 0.81
TCF3-219ENST00000610756 ZC3H10Q96K80 434 aaKnown RBP20.1■□□□□ 0.81
TCF3-219ENST00000610756 LSM14BQ9BX40 385 aaKnown RBP20.1■□□□□ 0.81
TCF3-219ENST00000610756 IRX2Q9BZI1 471 aaPredicted RBP20.1■□□□□ 0.81
TCF3-219ENST00000610756 POPDC2Q9HBU9 364 aa20.1■□□□□ 0.81
TCF3-219ENST00000610756 POLMQ9NP87 494 aaPredicted RBP20.1■□□□□ 0.81
TCF3-219ENST00000610756 TMEM63CQ9P1W3 806 aa20.1■□□□□ 0.81
TCF3-219ENST00000610756 GMEB2Q9UKD1 530 aa20.1■□□□□ 0.81
TCF3-219ENST00000610756 FHOD1Q9Y613 1164 aa20.1■□□□□ 0.81
TCF3-219ENST00000610756 CAPN9O14815 690 aa20.09■□□□□ 0.81
TCF3-219ENST00000610756 ALDH1A2O94788 518 aa20.09■□□□□ 0.81
TCF3-219ENST00000610756 GLI1P08151 1106 aa20.09■□□□□ 0.81
TCF3-219ENST00000610756 PNMA6AP0CW24 399 aaPredicted RBP20.09■□□□□ 0.81
TCF3-219ENST00000610756 HNRNPLP14866 589 aaKnown RBP eCLIP20.09■□□□□ 0.817e-8■■■■□ 21.9
TCF3-219ENST00000610756 NTSR1P30989 418 aa20.09■□□□□ 0.81
TCF3-219ENST00000610756 SNX16P57768 344 aa20.09■□□□□ 0.81
TCF3-219ENST00000610756 RAPGEF1Q13905 1077 aa20.09■□□□□ 0.81
TCF3-219ENST00000610756 SYPL2Q5VXT5 272 aa20.09■□□□□ 0.81
TCF3-219ENST00000610756 DQX1Q8TE96 717 aaKnown RBP20.09■□□□□ 0.81
TCF3-219ENST00000610756 TMA16Q96EY4 203 aaKnown RBP20.09■□□□□ 0.81
TCF3-219ENST00000610756 PIWIL1Q96J94 861 aaKnown RBP20.09■□□□□ 0.81
TCF3-219ENST00000610756 SERPINB11Q96P15 392 aa20.09■□□□□ 0.81
TCF3-219ENST00000610756 NOX5Q96PH1 765 aa20.09■□□□□ 0.81
TCF3-219ENST00000610756 CPXM1Q96SM3 734 aa20.09■□□□□ 0.81
TCF3-219ENST00000610756 LIMA1Q9UHB6 759 aaKnown RBP20.09■□□□□ 0.81
TCF3-219ENST00000610756 TLR6Q9Y2C9 796 aa20.09■□□□□ 0.81
TCF3-219ENST00000610756 CYP11B1P15538 503 aa20.08■□□□□ 0.81
TCF3-219ENST00000610756 TGM1P22735 817 aa20.08■□□□□ 0.81
TCF3-219ENST00000610756 SLC11A2P49281 568 aa20.08■□□□□ 0.81
TCF3-219ENST00000610756 TYRO3Q06418 890 aa20.08■□□□□ 0.81
TCF3-219ENST00000610756 NCAPHQ15003 741 aa20.08■□□□□ 0.81
TCF3-219ENST00000610756 USP39Q53GS9 565 aaKnown RBP20.08■□□□□ 0.81
TCF3-219ENST00000610756 EFHC1Q5JVL4 640 aa20.08■□□□□ 0.81
TCF3-219ENST00000610756 FKBP15Q5T1M5 1219 aa20.08■□□□□ 0.81
TCF3-219ENST00000610756 SDE2Q6IQ49 451 aa20.08■□□□□ 0.81
TCF3-219ENST00000610756 ANO7Q6IWH7 933 aa20.08■□□□□ 0.81
TCF3-219ENST00000610756 PASD1Q8IV76 773 aa20.08■□□□□ 0.81
TCF3-219ENST00000610756 KIAA2013Q8IYS2 634 aa20.08■□□□□ 0.81
TCF3-219ENST00000610756 FAM160A2Q8N612 972 aaPredicted RBP20.08■□□□□ 0.81
TCF3-219ENST00000610756 ANKRD20A12PQ8NF67 263 aa20.08■□□□□ 0.81
TCF3-219ENST00000610756 SLC39A13Q96H72 371 aa20.08■□□□□ 0.81
TCF3-219ENST00000610756 LOXL4Q96JB6 756 aa20.08■□□□□ 0.81
TCF3-219ENST00000610756 ZDHHC4Q9NPG8 344 aa20.08■□□□□ 0.81
TCF3-219ENST00000610756 IRAK2O43187 625 aa20.07■□□□□ 0.8
TCF3-219ENST00000610756 LRP3O75074 770 aa20.07■□□□□ 0.8
TCF3-219ENST00000610756 ZNF18P17022 549 aa20.07■□□□□ 0.8
TCF3-219ENST00000610756 COPB1P53618 953 aaKnown RBP20.07■□□□□ 0.8
TCF3-219ENST00000610756 TAF5Q15542 800 aa20.07■□□□□ 0.8
TCF3-219ENST00000610756 MPP7Q5T2T1 576 aa20.07■□□□□ 0.8
TCF3-219ENST00000610756 EGFLAMQ63HQ2 1017 aa20.07■□□□□ 0.8
TCF3-219ENST00000610756 MDGA1Q8NFP4 955 aa20.07■□□□□ 0.8
TCF3-219ENST00000610756 FCRL2Q96LA5 508 aaPredicted RBP20.07■□□□□ 0.8
TCF3-219ENST00000610756 NAT10Q9H0A0 1025 aaKnown RBP20.07■□□□□ 0.8
TCF3-219ENST00000610756 ASNSD1Q9NWL6 643 aa20.07■□□□□ 0.8
TCF3-219ENST00000610756 TJP2Q9UDY2 1190 aa20.07■□□□□ 0.8
TCF3-219ENST00000610756 CLEC4EQ9ULY5 219 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms