RNA–Protein interactions for RNA: ENST00000610359.4

MUC1-221, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-221ENST00000610359 LHX5Q9H2C1 402 aa7.27□□□□□ -1.25
MUC1-221ENST00000610359 IKZF4Q9H2S9 585 aa7.27□□□□□ -1.25
MUC1-221ENST00000610359 BRMS1Q9HCU9 246 aa7.27□□□□□ -1.25
MUC1-221ENST00000610359 THSD1Q9NS62 852 aa7.27□□□□□ -1.25
MUC1-221ENST00000610359 EHD2Q9NZN4 543 aa7.27□□□□□ -1.25
MUC1-221ENST00000610359 WDR35Q9P2L0 1181 aa7.27□□□□□ -1.25
MUC1-221ENST00000610359 CLEC4EQ9ULY5 219 aa7.27□□□□□ -1.25
MUC1-221ENST00000610359 SLC27A6Q9Y2P4 619 aa7.27□□□□□ -1.25
MUC1-221ENST00000610359 SNX9Q9Y5X1 595 aa7.27□□□□□ -1.25
MUC1-221ENST00000610359 A0A1W2PPC4 97 aa7.26□□□□□ -1.25
MUC1-221ENST00000610359 C10orf142B7Z368 130 aa7.26□□□□□ -1.25
MUC1-221ENST00000610359 NPC1O15118 1278 aa7.26□□□□□ -1.25
MUC1-221ENST00000610359 YKT6O15498 198 aa7.26□□□□□ -1.25
MUC1-221ENST00000610359 SIGLEC6O43699 453 aa7.26□□□□□ -1.25
MUC1-221ENST00000610359 OPA1O60313 960 aa7.26□□□□□ -1.25
MUC1-221ENST00000610359 PDGFRBP09619 1106 aa7.26□□□□□ -1.25
MUC1-221ENST00000610359 ZDHHC11BP0C7U3 371 aa7.26□□□□□ -1.25
MUC1-221ENST00000610359 YWHAQP27348 245 aa7.26□□□□□ -1.25
MUC1-221ENST00000610359 RXRGP48443 463 aa7.26□□□□□ -1.25
MUC1-221ENST00000610359 FOXK1P85037 733 aa7.26□□□□□ -1.25
MUC1-221ENST00000610359 SRSF6Q13247 344 aaKnown RBP7.26□□□□□ -1.25
MUC1-221ENST00000610359 CAMK2GQ13555 558 aaPredicted RBP7.26□□□□□ -1.25
MUC1-221ENST00000610359 ZSCAN23Q3MJ62 389 aa7.26□□□□□ -1.25
MUC1-221ENST00000610359 ARSHQ5FYA8 562 aa7.26□□□□□ -1.25
MUC1-221ENST00000610359 MDH1BQ5I0G3 518 aa7.26□□□□□ -1.25
MUC1-221ENST00000610359 TMEM215Q68D42 235 aa7.26□□□□□ -1.25
MUC1-221ENST00000610359 KIAA0895LQ68EN5 471 aa7.26□□□□□ -1.25
MUC1-221ENST00000610359 XKR5Q6UX68 686 aa7.26□□□□□ -1.25
MUC1-221ENST00000610359 SKAP1Q86WV1 359 aa7.26□□□□□ -1.25
MUC1-221ENST00000610359 SPATS2Q86XZ4 545 aaKnown RBP7.26□□□□□ -1.25
MUC1-221ENST00000610359 FAM26EQ8N5C1 309 aa7.26□□□□□ -1.25
MUC1-221ENST00000610359 IGSF22Q8N9C0 903 aa7.26□□□□□ -1.25
MUC1-221ENST00000610359 ZSWIM2Q8NEG5 633 aa7.26□□□□□ -1.25
MUC1-221ENST00000610359 SCAMP5Q8TAC9 235 aa7.26□□□□□ -1.25
MUC1-221ENST00000610359 MYCBPAPQ8TBZ2 947 aa7.26□□□□□ -1.25
MUC1-221ENST00000610359 FBXO32Q969P5 355 aa7.26□□□□□ -1.25
MUC1-221ENST00000610359 PIWIL1Q96J94 861 aaKnown RBP7.26□□□□□ -1.25
MUC1-221ENST00000610359 SLC46A1Q96NT5 459 aa7.26□□□□□ -1.25
MUC1-221ENST00000610359 KLF16Q9BXK1 252 aaPredicted RBP7.26□□□□□ -1.25
MUC1-221ENST00000610359 EPN3Q9H201 632 aa7.26□□□□□ -1.25
MUC1-221ENST00000610359 SIX4Q9UIU6 781 aa7.26□□□□□ -1.25
MUC1-221ENST00000610359 KCNG1Q9UIX4 513 aa7.26□□□□□ -1.25
MUC1-221ENST00000610359 CDH9Q9ULB4 789 aa7.26□□□□□ -1.25
MUC1-221ENST00000610359 SATB2Q9UPW6 733 aa7.26□□□□□ -1.25
MUC1-221ENST00000610359 HIVEP3Q5T1R4 2406 aa7.26□□□□□ -1.25
MUC1-221ENST00000610359 CDRT15L2A8MXV6 281 aa7.25□□□□□ -1.25
MUC1-221ENST00000610359 CLDN5O00501 218 aa7.25□□□□□ -1.25
MUC1-221ENST00000610359 PFKFB2O60825 505 aa7.25□□□□□ -1.25
MUC1-221ENST00000610359 TBX18O95935 607 aa7.25□□□□□ -1.25
MUC1-221ENST00000610359 PENKP01210 267 aaPredicted RBP7.25□□□□□ -1.25
MUC1-221ENST00000610359 PRKCSHP14314 528 aaPredicted RBP7.25□□□□□ -1.25
MUC1-221ENST00000610359 CD38P28907 300 aa7.25□□□□□ -1.25
MUC1-221ENST00000610359 TUBP50607 506 aa7.25□□□□□ -1.25
MUC1-221ENST00000610359 SLC12A3P55017 1021 aa7.25□□□□□ -1.25
MUC1-221ENST00000610359 NXPH1P58417 271 aa7.25□□□□□ -1.25
MUC1-221ENST00000610359 RPS14P62263 151 aaKnown RBP7.25□□□□□ -1.25
MUC1-221ENST00000610359 IL17AQ16552 155 aa7.25□□□□□ -1.25
MUC1-221ENST00000610359 C3orf38Q5JPI3 329 aa7.25□□□□□ -1.25
MUC1-221ENST00000610359 FYB2Q5VWT5 728 aa7.25□□□□□ -1.25
MUC1-221ENST00000610359 ADALQ6DHV7 355 aa7.25□□□□□ -1.25
MUC1-221ENST00000610359 Q6ZNB5 142 aa7.25□□□□□ -1.25
MUC1-221ENST00000610359 NUP93Q8N1F7 819 aa7.25□□□□□ -1.25
MUC1-221ENST00000610359 CSGALNACT2Q8N6G5 542 aa7.25□□□□□ -1.25
MUC1-221ENST00000610359 LRRC52Q8N7C0 313 aa7.25□□□□□ -1.25
MUC1-221ENST00000610359 ZNF366Q8N895 744 aa7.25□□□□□ -1.25
MUC1-221ENST00000610359 SYT2Q8N9I0 419 aaPredicted RBP7.25□□□□□ -1.25
MUC1-221ENST00000610359 PDZD8Q8NEN9 1154 aa7.25□□□□□ -1.25
MUC1-221ENST00000610359 OVCA2Q8WZ82 227 aa7.25□□□□□ -1.25
MUC1-221ENST00000610359 LIN37Q96GY3 246 aaPredicted RBP7.25□□□□□ -1.25
MUC1-221ENST00000610359 DEPDC7Q96QD5 511 aa7.25□□□□□ -1.25
MUC1-221ENST00000610359 CCNL2Q96S94 520 aaPredicted RBP7.25□□□□□ -1.25
MUC1-221ENST00000610359 FIZ1Q96SL8 496 aa7.25□□□□□ -1.25
MUC1-221ENST00000610359 ARHGAP9Q9BRR9 750 aa7.25□□□□□ -1.25
MUC1-221ENST00000610359 ZNF518BQ9C0D4 1074 aa7.25□□□□□ -1.25
MUC1-221ENST00000610359 CAAP1Q9H8G2 361 aa7.25□□□□□ -1.25
MUC1-221ENST00000610359 GDF3Q9NR23 364 aa7.25□□□□□ -1.25
MUC1-221ENST00000610359 ELOVL2Q9NXB9 296 aa7.25□□□□□ -1.25
MUC1-221ENST00000610359 IL37Q9NZH6 218 aa7.25□□□□□ -1.25
MUC1-221ENST00000610359 PLEKHB1Q9UF11 243 aaPredicted RBP7.25□□□□□ -1.25
MUC1-221ENST00000610359 AGO2Q9UKV8 859 aaKnown RBP7.25□□□□□ -1.25
MUC1-221ENST00000610359 STYXL1Q9Y6J8 313 aa7.25□□□□□ -1.25
MUC1-221ENST00000610359 UNC13CQ8NB66 2214 aa7.25□□□□□ -1.25
MUC1-221ENST00000610359 OTOGQ6ZRI0 2925 aa7.24□□□□□ -1.25
MUC1-221ENST00000610359 ESPL1Q14674 2120 aa7.24□□□□□ -1.25
MUC1-221ENST00000610359 A0A1B0GVM2 712 aa7.24□□□□□ -1.25
MUC1-221ENST00000610359 H0YCG3 227 aa7.24□□□□□ -1.25
MUC1-221ENST00000610359 K7ENM7 598 aa7.24□□□□□ -1.25
MUC1-221ENST00000610359 LZTS3O60299 673 aaPredicted RBP7.24□□□□□ -1.25
MUC1-221ENST00000610359 SDC3O75056 442 aa7.24□□□□□ -1.25
MUC1-221ENST00000610359 CDC45O75419 566 aa7.24□□□□□ -1.25
MUC1-221ENST00000610359 ITGB2P05107 769 aa7.24□□□□□ -1.25
MUC1-221ENST00000610359 WARSP23381 471 aaKnown RBP7.24□□□□□ -1.25
MUC1-221ENST00000610359 ARRB1P49407 418 aaPredicted RBP7.24□□□□□ -1.25
MUC1-221ENST00000610359 GALCP54803 685 aa7.24□□□□□ -1.25
MUC1-221ENST00000610359 ASIC1P78348 528 aa7.24□□□□□ -1.25
MUC1-221ENST00000610359 TFAMQ00059 246 aaKnown RBP7.24□□□□□ -1.25
MUC1-221ENST00000610359 POU5F1Q01860 360 aaKnown RBP7.24□□□□□ -1.25
MUC1-221ENST00000610359 KCNJ12Q14500 433 aa7.24□□□□□ -1.25
MUC1-221ENST00000610359 MAPRE1Q15691 268 aaKnown RBP7.24□□□□□ -1.25
MUC1-221ENST00000610359 SKIDA1Q1XH10 827 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms