RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 TTLL1O95922 423 aa4.31□□□□□ -1.72
CKS1BP3-201ENST00000600888 ONECUT2O95948 504 aa4.31□□□□□ -1.72
CKS1BP3-201ENST00000600888 NUDT3O95989 172 aa4.31□□□□□ -1.72
CKS1BP3-201ENST00000600888 KRT18P05783 430 aaKnown RBP4.31□□□□□ -1.72
CKS1BP3-201ENST00000600888 IL6RP08887 468 aaPredicted RBP4.31□□□□□ -1.72
CKS1BP3-201ENST00000600888 TXNP10599 105 aaKnown RBP4.31□□□□□ -1.72
CKS1BP3-201ENST00000600888 IL1R1P14778 569 aa4.31□□□□□ -1.72
CKS1BP3-201ENST00000600888 ADORA2AP29274 412 aa4.31□□□□□ -1.72
CKS1BP3-201ENST00000600888 ALDH9A1P49189 494 aa4.31□□□□□ -1.72
CKS1BP3-201ENST00000600888 PTH2RP49190 550 aa4.31□□□□□ -1.72
CKS1BP3-201ENST00000600888 PDE6CP51160 858 aa4.31□□□□□ -1.72
CKS1BP3-201ENST00000600888 ATXN1P54253 815 aaKnown RBP4.31□□□□□ -1.72
CKS1BP3-201ENST00000600888 PRKAG1P54619 331 aa4.31□□□□□ -1.72
CKS1BP3-201ENST00000600888 TBX4P57082 545 aa4.31□□□□□ -1.72
CKS1BP3-201ENST00000600888 INHBEP58166 350 aa4.31□□□□□ -1.72
CKS1BP3-201ENST00000600888 HTRA4P83105 476 aaPredicted RBP4.31□□□□□ -1.72
CKS1BP3-201ENST00000600888 CALD1Q05682 793 aaKnown RBP4.31□□□□□ -1.72
CKS1BP3-201ENST00000600888 NPY5RQ15761 445 aa4.31□□□□□ -1.72
CKS1BP3-201ENST00000600888 HLFQ16534 295 aa4.31□□□□□ -1.72
CKS1BP3-201ENST00000600888 SMN1Q16637 294 aaKnown RBP4.31□□□□□ -1.72
CKS1BP3-201ENST00000600888 INSCQ1MX18 579 aa4.31□□□□□ -1.72
CKS1BP3-201ENST00000600888 CRY2Q49AN0 593 aa4.31□□□□□ -1.72
CKS1BP3-201ENST00000600888 PARP10Q53GL7 1025 aa4.31□□□□□ -1.72
CKS1BP3-201ENST00000600888 HSP90AB3PQ58FF7 597 aa4.31□□□□□ -1.72
CKS1BP3-201ENST00000600888 PLAC9Q5JTB6 97 aa4.31□□□□□ -1.72
CKS1BP3-201ENST00000600888 SLC10A5Q5PT55 438 aa4.31□□□□□ -1.72
CKS1BP3-201ENST00000600888 TREML2Q5T2D2 321 aa4.31□□□□□ -1.72
CKS1BP3-201ENST00000600888 DEPDC1Q5TB30 811 aa4.31□□□□□ -1.72
CKS1BP3-201ENST00000600888 STRIP1Q5VSL9 837 aa4.31□□□□□ -1.72
CKS1BP3-201ENST00000600888 UNC13DQ70J99 1090 aa4.31□□□□□ -1.72
CKS1BP3-201ENST00000600888 ZNF551Q7Z340 670 aaPredicted RBP4.31□□□□□ -1.72
CKS1BP3-201ENST00000600888 GRASPQ7Z6J2 395 aaPredicted RBP4.31□□□□□ -1.72
CKS1BP3-201ENST00000600888 NBPF5PQ86XG9 351 aaPredicted RBP4.31□□□□□ -1.72
CKS1BP3-201ENST00000600888 CCDC146Q8IYE0 955 aa4.31□□□□□ -1.72
CKS1BP3-201ENST00000600888 ABRAQ8N0Z2 381 aa4.31□□□□□ -1.72
CKS1BP3-201ENST00000600888 OSCP1Q8WVF1 389 aa4.31□□□□□ -1.72
CKS1BP3-201ENST00000600888 GLG1Q92896 1179 aa4.31□□□□□ -1.72
CKS1BP3-201ENST00000600888 ZG16BQ96DA0 208 aa4.31□□□□□ -1.72
CKS1BP3-201ENST00000600888 MASTLQ96GX5 879 aa4.31□□□□□ -1.72
CKS1BP3-201ENST00000600888 SNX22Q96L94 193 aa4.31□□□□□ -1.72
CKS1BP3-201ENST00000600888 NAA15Q9BXJ9 866 aaKnown RBP4.31□□□□□ -1.72
CKS1BP3-201ENST00000600888 CHMP4AQ9BY43 222 aa4.31□□□□□ -1.72
CKS1BP3-201ENST00000600888 NYXQ9GZU5 481 aa4.31□□□□□ -1.72
CKS1BP3-201ENST00000600888 GLOD4Q9HC38 313 aa4.31□□□□□ -1.72
CKS1BP3-201ENST00000600888 GBA2Q9HCG7 927 aaPredicted RBP4.31□□□□□ -1.72
CKS1BP3-201ENST00000600888 ARHGEF3Q9NR81 526 aa4.31□□□□□ -1.72
CKS1BP3-201ENST00000600888 IL17RBQ9NRM6 502 aa4.31□□□□□ -1.72
CKS1BP3-201ENST00000600888 DNMT3BQ9UBC3 853 aaKnown RBP4.31□□□□□ -1.72
CKS1BP3-201ENST00000600888 ITGB1BP2Q9UKP3 347 aa4.31□□□□□ -1.72
CKS1BP3-201ENST00000600888 HDAC9Q9UKV0 1011 aa4.31□□□□□ -1.72
CKS1BP3-201ENST00000600888 CORO2BQ9UQ03 480 aa4.31□□□□□ -1.72
CKS1BP3-201ENST00000600888 NIP7Q9Y221 180 aaKnown RBP eCLIP4.31□□□□□ -1.72
CKS1BP3-201ENST00000600888 RRP7AQ9Y3A4 280 aaKnown RBP4.31□□□□□ -1.72
CKS1BP3-201ENST00000600888 ENTPD2Q9Y5L3 495 aa4.31□□□□□ -1.72
CKS1BP3-201ENST00000600888 CDY1Q9Y6F8 540 aa4.31□□□□□ -1.72
CKS1BP3-201ENST00000600888 LRRC37AA6NMS7 1700 aa4.31□□□□□ -1.72
CKS1BP3-201ENST00000600888 SNED1Q8TER0 1413 aa4.3□□□□□ -1.72
CKS1BP3-201ENST00000600888 ARHGEF17Q96PE2 2063 aaPredicted RBP4.3□□□□□ -1.72
CKS1BP3-201ENST00000600888 H7C4K7 107 aa4.3□□□□□ -1.72
CKS1BP3-201ENST00000600888 PMM2O15305 246 aa4.3□□□□□ -1.72
CKS1BP3-201ENST00000600888 CCP110O43303 1012 aa4.3□□□□□ -1.72
CKS1BP3-201ENST00000600888 IL18RAPO95256 599 aa4.3□□□□□ -1.72
CKS1BP3-201ENST00000600888 NTSR2O95665 410 aa4.3□□□□□ -1.72
CKS1BP3-201ENST00000600888 MT-ND5P03915 603 aa4.3□□□□□ -1.72
CKS1BP3-201ENST00000600888 MYL6BP14649 208 aa4.3□□□□□ -1.72
CKS1BP3-201ENST00000600888 JUPP14923 745 aa4.3□□□□□ -1.72
CKS1BP3-201ENST00000600888 BTF3P20290 206 aaKnown RBP4.3□□□□□ -1.72
CKS1BP3-201ENST00000600888 ALDH1B1P30837 517 aa4.3□□□□□ -1.72
CKS1BP3-201ENST00000600888 PRELPP51888 382 aa4.3□□□□□ -1.72
CKS1BP3-201ENST00000600888 ZNF543Q08ER8 600 aa4.3□□□□□ -1.72
CKS1BP3-201ENST00000600888 CCNIQ14094 377 aa4.3□□□□□ -1.72
CKS1BP3-201ENST00000600888 DAG1Q14118 895 aa4.3□□□□□ -1.72
CKS1BP3-201ENST00000600888 ARHGEF7Q14155 803 aa4.3□□□□□ -1.72
CKS1BP3-201ENST00000600888 SLC29A2Q14542 456 aa4.3□□□□□ -1.72
CKS1BP3-201ENST00000600888 LY6KQ17RY6 165 aa4.3□□□□□ -1.72
CKS1BP3-201ENST00000600888 KIF6Q6ZMV9 814 aa4.3□□□□□ -1.72
CKS1BP3-201ENST00000600888 PPP1R42Q7Z4L9 355 aa4.3□□□□□ -1.72
CKS1BP3-201ENST00000600888 KCTD20Q7Z5Y7 419 aa4.3□□□□□ -1.72
CKS1BP3-201ENST00000600888 YAF2Q8IY57 180 aa4.3□□□□□ -1.72
CKS1BP3-201ENST00000600888 IZUMO1Q8IYV9 350 aa4.3□□□□□ -1.72
CKS1BP3-201ENST00000600888 SPARTQ8N0X7 666 aa4.3□□□□□ -1.72
CKS1BP3-201ENST00000600888 SDR16C5Q8N3Y7 309 aa4.3□□□□□ -1.72
CKS1BP3-201ENST00000600888 NGEFQ8N5V2 710 aa4.3□□□□□ -1.72
CKS1BP3-201ENST00000600888 TMEM171Q8WVE6 324 aa4.3□□□□□ -1.72
CKS1BP3-201ENST00000600888 HAPLN3Q96S86 360 aa4.3□□□□□ -1.72
CKS1BP3-201ENST00000600888 TBCBQ99426 244 aa4.3□□□□□ -1.72
CKS1BP3-201ENST00000600888 TIMP4Q99727 224 aa4.3□□□□□ -1.72
CKS1BP3-201ENST00000600888 TRIM5Q9C035 493 aa4.3□□□□□ -1.72
CKS1BP3-201ENST00000600888 DHX36Q9H2U1 1008 aaKnown RBP4.3□□□□□ -1.72
CKS1BP3-201ENST00000600888 PRDM13Q9H4Q3 707 aa4.3□□□□□ -1.72
CKS1BP3-201ENST00000600888 ARNT2Q9HBZ2 717 aa4.3□□□□□ -1.72
CKS1BP3-201ENST00000600888 TRMT13Q9NUP7 481 aaKnown RBP4.3□□□□□ -1.72
CKS1BP3-201ENST00000600888 DBF4Q9UBU7 674 aaPredicted RBP4.3□□□□□ -1.72
CKS1BP3-201ENST00000600888 MID2Q9UJV3 735 aa4.3□□□□□ -1.72
CKS1BP3-201ENST00000600888 SH2B3Q9UQQ2 575 aa4.3□□□□□ -1.72
CKS1BP3-201ENST00000600888 SNX14Q9Y5W7 946 aa4.3□□□□□ -1.72
CKS1BP3-201ENST00000600888 PSME4Q14997 1843 aa4.3□□□□□ -1.72
CKS1BP3-201ENST00000600888 IL16Q14005 1332 aa4.29□□□□□ -1.72
CKS1BP3-201ENST00000600888 UBN2Q6ZU65 1347 aa4.29□□□□□ -1.72
CKS1BP3-201ENST00000600888 ANO9A1A5B4 782 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 828.9 ms