RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 SDE2Q6IQ49 451 aa10.98□□□□□ -0.65
CCDC9-203ENST00000596938 ANO7Q6IWH7 933 aa10.98□□□□□ -0.65
CCDC9-203ENST00000596938 DENND1BQ6P3S1 775 aa10.98□□□□□ -0.65
CCDC9-203ENST00000596938 GJB7Q6PEY0 223 aa10.98□□□□□ -0.65
CCDC9-203ENST00000596938 RBM43Q6ZSC3 357 aaKnown RBP10.98□□□□□ -0.65
CCDC9-203ENST00000596938 TOGARAM2Q6ZUX3 1019 aa10.98□□□□□ -0.65
CCDC9-203ENST00000596938 ERMP1Q7Z2K6 904 aa10.98□□□□□ -0.65
CCDC9-203ENST00000596938 UNC45BQ8IWX7 931 aa10.98□□□□□ -0.65
CCDC9-203ENST00000596938 MDGA1Q8NFP4 955 aa10.98□□□□□ -0.65
CCDC9-203ENST00000596938 ENOX1Q8TC92 643 aaKnown RBP10.98□□□□□ -0.65
CCDC9-203ENST00000596938 BHMTQ93088 406 aa10.98□□□□□ -0.65
CCDC9-203ENST00000596938 AZIN2Q96A70 460 aa10.98□□□□□ -0.65
CCDC9-203ENST00000596938 TUBGCP2Q9BSJ2 902 aa10.98□□□□□ -0.65
CCDC9-203ENST00000596938 IRX2Q9BZI1 471 aaPredicted RBP10.98□□□□□ -0.65
CCDC9-203ENST00000596938 MIS12Q9H081 205 aa10.98□□□□□ -0.65
CCDC9-203ENST00000596938 SIX2Q9NPC8 291 aa10.98□□□□□ -0.65
CCDC9-203ENST00000596938 PLK2Q9NYY3 685 aa10.98□□□□□ -0.65
CCDC9-203ENST00000596938 USP18Q9UMW8 372 aa10.98□□□□□ -0.65
CCDC9-203ENST00000596938 DNAH14Q0VDD8 3507 aa10.98□□□□□ -0.65
CCDC9-203ENST00000596938 SPTBN4Q9H254 2564 aa10.97□□□□□ -0.65
CCDC9-203ENST00000596938 A0A1W2PQF6 199 aa10.97□□□□□ -0.65
CCDC9-203ENST00000596938 PIK3R2O00459 728 aa10.97□□□□□ -0.65
CCDC9-203ENST00000596938 DCLK1O15075 740 aa10.97□□□□□ -0.65
CCDC9-203ENST00000596938 THAP12O43422 761 aa10.97□□□□□ -0.65
CCDC9-203ENST00000596938 EPN2O95208 641 aa10.97□□□□□ -0.65
CCDC9-203ENST00000596938 IGLV3-27P01718 113 aa10.97□□□□□ -0.65
CCDC9-203ENST00000596938 ZNF806P0C7X5 589 aa10.97□□□□□ -0.65
CCDC9-203ENST00000596938 EEF1GP26641 437 aaKnown RBP10.97□□□□□ -0.65
CCDC9-203ENST00000596938 SLC11A2P49281 568 aa10.97□□□□□ -0.65
CCDC9-203ENST00000596938 APBA1Q02410 837 aa10.97□□□□□ -0.65
CCDC9-203ENST00000596938 PTK2Q05397 1052 aa10.97□□□□□ -0.65
CCDC9-203ENST00000596938 BYSLQ13895 437 aaKnown RBP10.97□□□□□ -0.65
CCDC9-203ENST00000596938 ARHGAP44Q17R89 818 aa10.97□□□□□ -0.65
CCDC9-203ENST00000596938 RSPO4Q2I0M5 234 aaPredicted RBP10.97□□□□□ -0.65
CCDC9-203ENST00000596938 PLA2G2CQ5R387 149 aa10.97□□□□□ -0.65
CCDC9-203ENST00000596938 MPP7Q5T2T1 576 aa10.97□□□□□ -0.65
CCDC9-203ENST00000596938 EGFLAMQ63HQ2 1017 aa10.97□□□□□ -0.65
CCDC9-203ENST00000596938 NUGGCQ68CJ6 796 aa10.97□□□□□ -0.65
CCDC9-203ENST00000596938 DPY19L2P1Q6NXN4 242 aa10.97□□□□□ -0.65
CCDC9-203ENST00000596938 CHPFQ8IZ52 775 aa10.97□□□□□ -0.65
CCDC9-203ENST00000596938 WDTC1Q8N5D0 677 aa10.97□□□□□ -0.65
CCDC9-203ENST00000596938 CLEC4CQ8WTT0 213 aa10.97□□□□□ -0.65
CCDC9-203ENST00000596938 DDI1Q8WTU0 396 aa10.97□□□□□ -0.65
CCDC9-203ENST00000596938 TMA16Q96EY4 203 aaKnown RBP10.97□□□□□ -0.65
CCDC9-203ENST00000596938 PIWIL1Q96J94 861 aaKnown RBP10.97□□□□□ -0.65
CCDC9-203ENST00000596938 GABRG3Q99928 467 aa10.97□□□□□ -0.65
CCDC9-203ENST00000596938 TRIM62Q9BVG3 475 aa10.97□□□□□ -0.65
CCDC9-203ENST00000596938 LHX5Q9H2C1 402 aa10.97□□□□□ -0.65
CCDC9-203ENST00000596938 ARRDC1-AS1Q9H2J1 176 aa10.97□□□□□ -0.65
CCDC9-203ENST00000596938 CD248Q9HCU0 757 aa10.97□□□□□ -0.65
CCDC9-203ENST00000596938 ZDHHC4Q9NPG8 344 aa10.97□□□□□ -0.65
CCDC9-203ENST00000596938 ACP6Q9NPH0 428 aa10.97□□□□□ -0.65
CCDC9-203ENST00000596938 ST7Q9NRC1 585 aa10.97□□□□□ -0.65
CCDC9-203ENST00000596938 DNAJC12Q9UKB3 198 aa10.97□□□□□ -0.65
CCDC9-203ENST00000596938 PCDHGC3Q9UN70 934 aa10.97□□□□□ -0.65
CCDC9-203ENST00000596938 HELZP42694 1942 aaKnown RBP10.96□□□□□ -0.65
CCDC9-203ENST00000596938 KCNJ18B7U540 433 aa10.96□□□□□ -0.65
CCDC9-203ENST00000596938 FOXN3O00409 490 aaPredicted RBP10.96□□□□□ -0.65
CCDC9-203ENST00000596938 ZBTB24O43167 697 aaPredicted RBP10.96□□□□□ -0.65
CCDC9-203ENST00000596938 IRAK2O43187 625 aa10.96□□□□□ -0.65
CCDC9-203ENST00000596938 PAPSS1O43252 624 aaPredicted RBP10.96□□□□□ -0.65
CCDC9-203ENST00000596938 MSI1O43347 362 aaKnown RBP10.96□□□□□ -0.65
CCDC9-203ENST00000596938 NCAM1P13591 858 aa10.96□□□□□ -0.65
CCDC9-203ENST00000596938 USP8P40818 1118 aa10.96□□□□□ -0.65
CCDC9-203ENST00000596938 P2RY2P41231 377 aa10.96□□□□□ -0.65
CCDC9-203ENST00000596938 TBX4P57082 545 aa10.96□□□□□ -0.65
CCDC9-203ENST00000596938 BPIFB4P59827 614 aa10.96□□□□□ -0.65
CCDC9-203ENST00000596938 YWHAZP63104 245 aaKnown RBP10.96□□□□□ -0.65
CCDC9-203ENST00000596938 KCNMA1Q12791 1236 aa10.96□□□□□ -0.65
CCDC9-203ENST00000596938 NNTQ13423 1086 aa10.96□□□□□ -0.65
CCDC9-203ENST00000596938 ENPP2Q13822 863 aa10.96□□□□□ -0.65
CCDC9-203ENST00000596938 KCNJ12Q14500 433 aa10.96□□□□□ -0.65
CCDC9-203ENST00000596938 EIF4HQ15056 248 aaKnown RBP10.96□□□□□ -0.65
CCDC9-203ENST00000596938 GEN1Q17RS7 908 aa10.96□□□□□ -0.65
CCDC9-203ENST00000596938 TCP11X2Q5H9J9 407 aa10.96□□□□□ -0.65
CCDC9-203ENST00000596938 PRR23CQ6ZRP0 262 aa10.96□□□□□ -0.65
CCDC9-203ENST00000596938 FAM71AQ8IYT1 594 aa10.96□□□□□ -0.65
CCDC9-203ENST00000596938 GPT2Q8TD30 523 aa10.96□□□□□ -0.65
CCDC9-203ENST00000596938 ACOX2Q99424 681 aa10.96□□□□□ -0.65
CCDC9-203ENST00000596938 TPSD1Q9BZJ3 242 aa10.96□□□□□ -0.65
CCDC9-203ENST00000596938 SAMSN1Q9NSI8 373 aaKnown RBP10.96□□□□□ -0.65
CCDC9-203ENST00000596938 ELOVL2Q9NXB9 296 aa10.96□□□□□ -0.65
CCDC9-203ENST00000596938 CYTH4Q9UIA0 394 aa10.96□□□□□ -0.65
CCDC9-203ENST00000596938 INVSQ9Y283 1065 aa10.96□□□□□ -0.65
CCDC9-203ENST00000596938 TLR6Q9Y2C9 796 aa10.96□□□□□ -0.65
CCDC9-203ENST00000596938 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.96□□□□□ -0.65
CCDC9-203ENST00000596938 TCRBV21S2A2A0A5A6 115 aa10.95□□□□□ -0.66
CCDC9-203ENST00000596938 E5RJQ4 531 aa10.95□□□□□ -0.66
CCDC9-203ENST00000596938 GOLGA6L22H0YM25 854 aa10.95□□□□□ -0.66
CCDC9-203ENST00000596938 ACSL4O60488 711 aa10.95□□□□□ -0.66
CCDC9-203ENST00000596938 GLI1P08151 1106 aa10.95□□□□□ -0.66
CCDC9-203ENST00000596938 HOXB2P14652 356 aa10.95□□□□□ -0.66
CCDC9-203ENST00000596938 GABRG2P18507 467 aa10.95□□□□□ -0.66
CCDC9-203ENST00000596938 HOXD9P28356 352 aaPredicted RBP10.95□□□□□ -0.66
CCDC9-203ENST00000596938 GBP1P32455 592 aa10.95□□□□□ -0.66
CCDC9-203ENST00000596938 CLCN1P35523 988 aa10.95□□□□□ -0.66
CCDC9-203ENST00000596938 KRT9P35527 623 aa10.95□□□□□ -0.66
CCDC9-203ENST00000596938 WASP42768 502 aa10.95□□□□□ -0.66
CCDC9-203ENST00000596938 ATXN1P54253 815 aaKnown RBP10.95□□□□□ -0.66
CCDC9-203ENST00000596938 PDCLQ13371 301 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms