RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 CPXM2Q8N436 756 aa15.31■□□□□ 0.04
FANCA-220ENST00000566409 RNF139Q8WU17 664 aa15.31■□□□□ 0.04
FANCA-220ENST00000566409 HMGB4Q8WW32 186 aa15.31■□□□□ 0.04
FANCA-220ENST00000566409 PIWIL1Q96J94 861 aaKnown RBP15.31■□□□□ 0.04
FANCA-220ENST00000566409 HSFY1Q96LI6 401 aa15.31■□□□□ 0.04
FANCA-220ENST00000566409 OLA1Q9NTK5 396 aaKnown RBP15.31■□□□□ 0.04
FANCA-220ENST00000566409 LMBRD1Q9NUN5 540 aa15.31■□□□□ 0.04
FANCA-220ENST00000566409 MBD1Q9UIS9 605 aaPredicted RBP15.31■□□□□ 0.04
FANCA-220ENST00000566409 AJAP1Q9UKB5 411 aaPredicted RBP15.31■□□□□ 0.04
FANCA-220ENST00000566409 SLC27A6Q9Y2P4 619 aa15.31■□□□□ 0.04
FANCA-220ENST00000566409 HBS1LQ9Y450 684 aaKnown RBP15.31■□□□□ 0.04
FANCA-220ENST00000566409 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.3■□□□□ 0.04
FANCA-220ENST00000566409 TCRBV21S2A2A0A5A6 115 aa15.3■□□□□ 0.04
FANCA-220ENST00000566409 MED19A0JLT2 244 aaPredicted RBP15.3■□□□□ 0.04
FANCA-220ENST00000566409 WASH3PC4AMC7 463 aa15.3■□□□□ 0.04
FANCA-220ENST00000566409 KRT5P13647 590 aa15.3■□□□□ 0.04
FANCA-220ENST00000566409 GABRG2P18507 467 aa15.3■□□□□ 0.04
FANCA-220ENST00000566409 PON1P27169 355 aa15.3■□□□□ 0.04
FANCA-220ENST00000566409 GBP1P32455 592 aa15.3■□□□□ 0.04
FANCA-220ENST00000566409 P2RY2P41231 377 aa15.3■□□□□ 0.04
FANCA-220ENST00000566409 GEN1Q17RS7 908 aa15.3■□□□□ 0.04
FANCA-220ENST00000566409 MAP7D1Q3KQU3 841 aa15.3■□□□□ 0.04
FANCA-220ENST00000566409 PMS2CLQ68D20 193 aa15.3■□□□□ 0.04
FANCA-220ENST00000566409 KIAA1211LQ6NV74 962 aa15.3■□□□□ 0.04
FANCA-220ENST00000566409 DPY19L2P1Q6NXN4 242 aa15.3■□□□□ 0.04
FANCA-220ENST00000566409 NUDT18Q6ZVK8 323 aa15.3■□□□□ 0.04
FANCA-220ENST00000566409 ZNF606Q8WXB4 792 aa15.3■□□□□ 0.04
FANCA-220ENST00000566409 IRGQQ8WZA9 623 aa15.3■□□□□ 0.04
FANCA-220ENST00000566409 ERLEC1Q96DZ1 483 aa15.3■□□□□ 0.04
FANCA-220ENST00000566409 GABRG3Q99928 467 aa15.3■□□□□ 0.04
FANCA-220ENST00000566409 MIS12Q9H081 205 aa15.3■□□□□ 0.04
FANCA-220ENST00000566409 POLMQ9NP87 494 aaPredicted RBP15.3■□□□□ 0.04
FANCA-220ENST00000566409 SIX2Q9NPC8 291 aa15.3■□□□□ 0.04
FANCA-220ENST00000566409 STOML2Q9UJZ1 356 aa15.3■□□□□ 0.04
FANCA-220ENST00000566409 PCDHGA5Q9Y5G8 931 aa15.3■□□□□ 0.04
FANCA-220ENST00000566409 BCLAF3A2AJT9 711 aaKnown RBP15.29■□□□□ 0.04
FANCA-220ENST00000566409 DCDC2BA2VCK2 349 aa15.29■□□□□ 0.04
FANCA-220ENST00000566409 GTPBP10A4D1E9 387 aaKnown RBP15.29■□□□□ 0.04
FANCA-220ENST00000566409 ALDH1A2O94788 518 aa15.29■□□□□ 0.04
FANCA-220ENST00000566409 RHOBTB1O94844 696 aa15.29■□□□□ 0.04
FANCA-220ENST00000566409 LETM1O95202 739 aaPredicted RBP15.29■□□□□ 0.04
FANCA-220ENST00000566409 IGLV3-27P01718 113 aa15.29■□□□□ 0.04
FANCA-220ENST00000566409 LTFP02788 710 aa15.29■□□□□ 0.04
FANCA-220ENST00000566409 HOXB2P14652 356 aa15.29■□□□□ 0.04
FANCA-220ENST00000566409 MPLP40238 635 aa15.29■□□□□ 0.04
FANCA-220ENST00000566409 FOXK2Q01167 660 aa15.29■□□□□ 0.04
FANCA-220ENST00000566409 ELF2Q15723 593 aa15.29■□□□□ 0.04
FANCA-220ENST00000566409 TMEM215Q68D42 235 aa15.29■□□□□ 0.04
FANCA-220ENST00000566409 TCEAL6Q6IPX3 200 aa15.29■□□□□ 0.04
FANCA-220ENST00000566409 GBP6Q6ZN66 633 aa15.29■□□□□ 0.04
FANCA-220ENST00000566409 ENOSF1Q7L5Y1 443 aa15.29■□□□□ 0.04
FANCA-220ENST00000566409 TRMT11Q7Z4G4 463 aaKnown RBP15.29■□□□□ 0.04
FANCA-220ENST00000566409 CHPFQ8IZ52 775 aa15.29■□□□□ 0.04
FANCA-220ENST00000566409 TCEAL3Q969E4 200 aa15.29■□□□□ 0.04
FANCA-220ENST00000566409 SLC4A5Q9BY07 1137 aa15.29■□□□□ 0.04
FANCA-220ENST00000566409 CACNA2D2Q9NY47 1150 aa15.29■□□□□ 0.04
FANCA-220ENST00000566409 APEX2Q9UBZ4 518 aa15.29■□□□□ 0.04
FANCA-220ENST00000566409 CDV3Q9UKY7 258 aaKnown RBP15.29■□□□□ 0.04
FANCA-220ENST00000566409 RAD54BQ9Y620 910 aa15.29■□□□□ 0.04
FANCA-220ENST00000566409 CKAP5Q14008 2032 aa15.29■□□□□ 0.04
FANCA-220ENST00000566409 TSPAN3O60637 253 aa15.28■□□□□ 0.04
FANCA-220ENST00000566409 FBXO21O94952 628 aa15.28■□□□□ 0.04
FANCA-220ENST00000566409 HOXD9P28356 352 aaPredicted RBP15.28■□□□□ 0.04
FANCA-220ENST00000566409 ANP32AP39687 249 aaKnown RBP15.28■□□□□ 0.04
FANCA-220ENST00000566409 MTIF2P46199 727 aaKnown RBP15.28■□□□□ 0.04
FANCA-220ENST00000566409 HARS2P49590 506 aaKnown RBP15.28■□□□□ 0.04
FANCA-220ENST00000566409 SGSHP51688 502 aa15.28■□□□□ 0.04
FANCA-220ENST00000566409 CREB5Q02930 508 aa15.28■□□□□ 0.04
FANCA-220ENST00000566409 ARHGAP44Q17R89 818 aa15.28■□□□□ 0.04
FANCA-220ENST00000566409 EXOC3L4Q17RC7 722 aa15.28■□□□□ 0.04
FANCA-220ENST00000566409 HSP90AA4PQ58FG1 418 aa15.28■□□□□ 0.04
FANCA-220ENST00000566409 MIIPQ5JXC2 388 aa15.28■□□□□ 0.04
FANCA-220ENST00000566409 ADGRF1Q5T601 910 aa15.28■□□□□ 0.04
FANCA-220ENST00000566409 WDTC1Q8N5D0 677 aa15.28■□□□□ 0.04
FANCA-220ENST00000566409 NETO1Q8TDF5 533 aa15.28■□□□□ 0.04
FANCA-220ENST00000566409 IPO4Q8TEX9 1081 aaKnown RBP15.28■□□□□ 0.04
FANCA-220ENST00000566409 DDI1Q8WTU0 396 aa15.28■□□□□ 0.04
FANCA-220ENST00000566409 STK32AQ8WU08 396 aa15.28■□□□□ 0.04
FANCA-220ENST00000566409 SHC3Q92529 594 aa15.28■□□□□ 0.04
FANCA-220ENST00000566409 NUP62CLQ9H1M0 184 aa15.28■□□□□ 0.04
FANCA-220ENST00000566409 SLC6A17Q9H1V8 727 aa15.28■□□□□ 0.04
FANCA-220ENST00000566409 THAP9Q9H5L6 903 aa15.28■□□□□ 0.04
FANCA-220ENST00000566409 ST7Q9NRC1 585 aa15.28■□□□□ 0.04
FANCA-220ENST00000566409 BCCIPQ9P287 314 aaKnown RBP eCLIP15.28■□□□□ 0.04
FANCA-220ENST00000566409 TJP2Q9UDY2 1190 aa15.28■□□□□ 0.04
FANCA-220ENST00000566409 CHD8Q9HCK8 2581 aa15.28■□□□□ 0.04
FANCA-220ENST00000566409 GOLGA6L7A0A1B0GV03 622 aa15.27■□□□□ 0.04
FANCA-220ENST00000566409 SLC30A4O14863 429 aa15.27■□□□□ 0.04
FANCA-220ENST00000566409 PAPSS1O43252 624 aaPredicted RBP15.27■□□□□ 0.04
FANCA-220ENST00000566409 THAP12O43422 761 aa15.27■□□□□ 0.04
FANCA-220ENST00000566409 NDUFV2P19404 249 aa15.27■□□□□ 0.04
FANCA-220ENST00000566409 SDHBP21912 280 aa15.27■□□□□ 0.04
FANCA-220ENST00000566409 ERCC5P28715 1186 aaPredicted RBP15.27■□□□□ 0.04
FANCA-220ENST00000566409 GNA15P30679 374 aa15.27■□□□□ 0.04
FANCA-220ENST00000566409 SLC6A4P31645 630 aa15.27■□□□□ 0.04
FANCA-220ENST00000566409 ENPP2Q13822 863 aa15.27■□□□□ 0.04
FANCA-220ENST00000566409 MEA1Q16626 185 aa15.27■□□□□ 0.04
FANCA-220ENST00000566409 FAM133BQ5BKY9 247 aaKnown RBP15.27■□□□□ 0.04
FANCA-220ENST00000566409 SYPL2Q5VXT5 272 aa15.27■□□□□ 0.04
FANCA-220ENST00000566409 TMEM110Q86TL2 294 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms