RNA–Protein interactions for RNA: ENST00000561330.1

USP8-218, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-218ENST00000561330 FSCN3Q9NQT6 498 aa5.46□□□□□ -1.54
USP8-218ENST00000561330 PDGFCQ9NRA1 345 aa5.46□□□□□ -1.54
USP8-218ENST00000561330 FBXO28Q9NVF7 368 aa5.46□□□□□ -1.54
USP8-218ENST00000561330 SPATA31A1Q5TZJ5 1347 aa5.46□□□□□ -1.54
USP8-218ENST00000561330 A0A087WV62 115 aa5.45□□□□□ -1.54
USP8-218ENST00000561330 CCDC187A0A096LP49 1063 aa5.45□□□□□ -1.54
USP8-218ENST00000561330 TTC34A8MYJ7 566 aa5.45□□□□□ -1.54
USP8-218ENST00000561330 PCDH17O14917 1159 aa5.45□□□□□ -1.54
USP8-218ENST00000561330 DSCR3O14972 297 aa5.45□□□□□ -1.54
USP8-218ENST00000561330 NPC1O15118 1278 aa5.45□□□□□ -1.54
USP8-218ENST00000561330 CTIFO43310 598 aaKnown RBP5.45□□□□□ -1.54
USP8-218ENST00000561330 TAF5LO75529 589 aa5.45□□□□□ -1.54
USP8-218ENST00000561330 ANXA6P08133 673 aa5.45□□□□□ -1.54
USP8-218ENST00000561330 SLC3A2P08195 630 aaKnown RBP5.45□□□□□ -1.54
USP8-218ENST00000561330 PRR35P0CG20 571 aa5.45□□□□□ -1.54
USP8-218ENST00000561330 ALDH18A1P54886 795 aaKnown RBP5.45□□□□□ -1.54
USP8-218ENST00000561330 MORC3Q14149 939 aa5.45□□□□□ -1.54
USP8-218ENST00000561330 CNGA3Q16281 694 aa5.45□□□□□ -1.54
USP8-218ENST00000561330 TRIM71Q2Q1W2 868 aaKnown RBP5.45□□□□□ -1.54
USP8-218ENST00000561330 NEK8Q86SG6 692 aa5.45□□□□□ -1.54
USP8-218ENST00000561330 GATAD2AQ86YP4 633 aa5.45□□□□□ -1.54
USP8-218ENST00000561330 CNGA4Q8IV77 575 aa5.45□□□□□ -1.54
USP8-218ENST00000561330 SPICE1Q8N0Z3 855 aa5.45□□□□□ -1.54
USP8-218ENST00000561330 OSR1Q8TAX0 266 aaPredicted RBP5.45□□□□□ -1.54
USP8-218ENST00000561330 RNF26Q9BY78 433 aaPredicted RBP5.45□□□□□ -1.54
USP8-218ENST00000561330 NRIP3Q9NQ35 241 aa5.45□□□□□ -1.54
USP8-218ENST00000561330 SLC52A1Q9NWF4 448 aa5.45□□□□□ -1.54
USP8-218ENST00000561330 SEMA5BQ9P283 1151 aa5.45□□□□□ -1.54
USP8-218ENST00000561330 SCAF8Q9UPN6 1271 aaKnown RBP5.45□□□□□ -1.54
USP8-218ENST00000561330 HEMK1Q9Y5R4 338 aaPredicted RBP5.45□□□□□ -1.54
USP8-218ENST00000561330 SMIM35A0A1B0GVV1 85 aa5.44□□□□□ -1.54
USP8-218ENST00000561330 AQP12BA6NM10 295 aa5.44□□□□□ -1.54
USP8-218ENST00000561330 ITGA5P08648 1049 aa5.44□□□□□ -1.54
USP8-218ENST00000561330 ALADP13716 330 aa5.44□□□□□ -1.54
USP8-218ENST00000561330 OS9Q13438 667 aaPredicted RBP5.44□□□□□ -1.54
USP8-218ENST00000561330 CBFBQ13951 182 aa5.44□□□□□ -1.54
USP8-218ENST00000561330 SPARCL1Q14515 664 aa5.44□□□□□ -1.54
USP8-218ENST00000561330 GRM4Q14833 912 aa5.44□□□□□ -1.54
USP8-218ENST00000561330 KPNB1Q14974 876 aaKnown RBP5.44□□□□□ -1.54
USP8-218ENST00000561330 ELF2Q15723 593 aa5.44□□□□□ -1.54
USP8-218ENST00000561330 SUPT20HL1Q3ZLR7 823 aa5.44□□□□□ -1.54
USP8-218ENST00000561330 MTX3Q5HYI7 312 aa5.44□□□□□ -1.54
USP8-218ENST00000561330 MSANTD2Q6P1R3 559 aa5.44□□□□□ -1.54
USP8-218ENST00000561330 ACSM6Q6P461 480 aa5.44□□□□□ -1.54
USP8-218ENST00000561330 MYLK4Q86YV6 388 aaPredicted RBP5.44□□□□□ -1.54
USP8-218ENST00000561330 WDR60Q8WVS4 1066 aa5.44□□□□□ -1.54
USP8-218ENST00000561330 AKAP1Q92667 903 aaKnown RBP eCLIP5.44□□□□□ -1.54
USP8-218ENST00000561330 CRB3Q9BUF7 120 aa5.44□□□□□ -1.54
USP8-218ENST00000561330 NUAK2Q9H093 628 aa5.44□□□□□ -1.54
USP8-218ENST00000561330 OBP2BQ9NPH6 170 aa5.44□□□□□ -1.54
USP8-218ENST00000561330 ARL8BQ9NVJ2 186 aa5.44□□□□□ -1.54
USP8-218ENST00000561330 KLHL13Q9P2N7 655 aa5.44□□□□□ -1.54
USP8-218ENST00000561330 TAGLN3Q9UI15 199 aa5.44□□□□□ -1.54
USP8-218ENST00000561330 F5H423 210 aaPredicted RBP5.43□□□□□ -1.54
USP8-218ENST00000561330 ASNA1O43681 348 aa5.43□□□□□ -1.54
USP8-218ENST00000561330 SKAP2O75563 359 aaPredicted RBP5.43□□□□□ -1.54
USP8-218ENST00000561330 CDK4P11802 303 aa5.43□□□□□ -1.54
USP8-218ENST00000561330 TACR3P29371 465 aa5.43□□□□□ -1.54
USP8-218ENST00000561330 ARHGAP25P42331 645 aa5.43□□□□□ -1.54
USP8-218ENST00000561330 VPS41P49754 854 aa5.43□□□□□ -1.54
USP8-218ENST00000561330 PTK2BQ14289 1009 aa5.43□□□□□ -1.54
USP8-218ENST00000561330 PUM3Q15397 648 aaKnown RBP5.43□□□□□ -1.54
USP8-218ENST00000561330 SEC23BQ15437 767 aa5.43□□□□□ -1.54
USP8-218ENST00000561330 FAM110CQ1W6H9 321 aa5.43□□□□□ -1.54
USP8-218ENST00000561330 MEX3CQ5U5Q3 659 aaKnown RBP5.43□□□□□ -1.54
USP8-218ENST00000561330 ZKSCAN2Q63HK3 967 aa5.43□□□□□ -1.54
USP8-218ENST00000561330 ZNF626Q68DY1 528 aa5.43□□□□□ -1.54
USP8-218ENST00000561330 RINT1Q6NUQ1 792 aa5.43□□□□□ -1.54
USP8-218ENST00000561330 NRSN1Q8IZ57 195 aa5.43□□□□□ -1.54
USP8-218ENST00000561330 FAM71BQ8TC56 605 aa5.43□□□□□ -1.54
USP8-218ENST00000561330 MAP4K1Q92918 833 aa5.43□□□□□ -1.54
USP8-218ENST00000561330 PAAF1Q9BRP4 392 aa5.43□□□□□ -1.54
USP8-218ENST00000561330 CDCP1Q9H5V8 836 aa5.43□□□□□ -1.54
USP8-218ENST00000561330 UBE2J1Q9Y385 318 aaPredicted RBP5.43□□□□□ -1.54
USP8-218ENST00000561330 CYP2D7A0A087X1C5 515 aa5.42□□□□□ -1.54
USP8-218ENST00000561330 WDR91A4D1P6 747 aa5.42□□□□□ -1.54
USP8-218ENST00000561330 DNAJC9-AS1A6NH13 148 aa5.42□□□□□ -1.54
USP8-218ENST00000561330 LGALS16A8MUM7 142 aa5.42□□□□□ -1.54
USP8-218ENST00000561330 KCNU1A8MYU2 1149 aa5.42□□□□□ -1.54
USP8-218ENST00000561330 M0QZQ0 153 aa5.42□□□□□ -1.54
USP8-218ENST00000561330 CER1O95813 267 aa5.42□□□□□ -1.54
USP8-218ENST00000561330 GHRHRQ02643 423 aa5.42□□□□□ -1.54
USP8-218ENST00000561330 ICA1Q05084 483 aa5.42□□□□□ -1.54
USP8-218ENST00000561330 DAZAP2Q15038 168 aaPredicted RBP5.42□□□□□ -1.54
USP8-218ENST00000561330 PFKFB4Q16877 469 aa5.42□□□□□ -1.54
USP8-218ENST00000561330 ZACNQ401N2 412 aa5.42□□□□□ -1.54
USP8-218ENST00000561330 ANO7Q6IWH7 933 aa5.42□□□□□ -1.54
USP8-218ENST00000561330 KYAT3Q6YP21 454 aaKnown RBP5.42□□□□□ -1.54
USP8-218ENST00000561330 VPS37AQ8NEZ2 397 aa5.42□□□□□ -1.54
USP8-218ENST00000561330 SLC22A17Q8WUG5 538 aa5.42□□□□□ -1.54
USP8-218ENST00000561330 STYXQ8WUJ0 223 aa5.42□□□□□ -1.54
USP8-218ENST00000561330 GLMPQ8WWB7 406 aa5.42□□□□□ -1.54
USP8-218ENST00000561330 FAR2Q96K12 515 aa5.42□□□□□ -1.54
USP8-218ENST00000561330 PRSS22Q9GZN4 317 aa5.42□□□□□ -1.54
USP8-218ENST00000561330 TP63Q9H3D4 680 aaPredicted RBP5.42□□□□□ -1.54
USP8-218ENST00000561330 ASNSD1Q9NWL6 643 aa5.42□□□□□ -1.54
USP8-218ENST00000561330 PI4KBQ9UBF8 816 aa5.42□□□□□ -1.54
USP8-218ENST00000561330 NFU1Q9UMS0 254 aa5.42□□□□□ -1.54
USP8-218ENST00000561330 SIRT4Q9Y6E7 314 aaPredicted RBP5.42□□□□□ -1.54
USP8-218ENST00000561330 ZNF804BA4D1E1 1349 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms