RNA–Protein interactions for RNA: ENST00000553960.1

PABPN1-203, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-203ENST00000553960 DOCK4Q8N1I0 1966 aa11.3□□□□□ -0.6
PABPN1-203ENST00000553960 CHD5Q8TDI0 1954 aa11.29□□□□□ -0.6
PABPN1-203ENST00000553960 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.29□□□□□ -0.6
PABPN1-203ENST00000553960 CXorf51AA0A1B0GTR3 108 aa11.29□□□□□ -0.6
PABPN1-203ENST00000553960 TCRBV7S2A1N4TA0A589 114 aa11.29□□□□□ -0.6
PABPN1-203ENST00000553960 BCLAF3A2AJT9 711 aaKnown RBP11.29□□□□□ -0.6
PABPN1-203ENST00000553960 ZNF840PA6NDX5 716 aa11.29□□□□□ -0.6
PABPN1-203ENST00000553960 C2orf71A6NGG8 1288 aa11.29□□□□□ -0.6
PABPN1-203ENST00000553960 H3BRJ5 948 aa11.29□□□□□ -0.6
PABPN1-203ENST00000553960 RAD51CO43502 376 aa11.29□□□□□ -0.6
PABPN1-203ENST00000553960 ERLIN1O75477 346 aa11.29□□□□□ -0.6
PABPN1-203ENST00000553960 GAS8O95995 478 aa11.29□□□□□ -0.6
PABPN1-203ENST00000553960 OAS1P00973 400 aaKnown RBP11.29□□□□□ -0.6
PABPN1-203ENST00000553960 IVDP26440 423 aa11.29□□□□□ -0.6
PABPN1-203ENST00000553960 WEE1P30291 646 aa11.29□□□□□ -0.6
PABPN1-203ENST00000553960 ARL4AP40617 200 aa11.29□□□□□ -0.6
PABPN1-203ENST00000553960 USP46P62068 366 aa11.29□□□□□ -0.6
PABPN1-203ENST00000553960 DR1Q01658 176 aa11.29□□□□□ -0.6
PABPN1-203ENST00000553960 CAV1Q03135 178 aa11.29□□□□□ -0.6
PABPN1-203ENST00000553960 C2orf54Q08AI8 447 aa11.29□□□□□ -0.6
PABPN1-203ENST00000553960 TAF10Q12962 218 aa11.29□□□□□ -0.6
PABPN1-203ENST00000553960 PTK6Q13882 451 aa11.29□□□□□ -0.6
PABPN1-203ENST00000553960 BYSLQ13895 437 aaKnown RBP11.29□□□□□ -0.6
PABPN1-203ENST00000553960 VEPH1Q14D04 833 aa11.29□□□□□ -0.6
PABPN1-203ENST00000553960 MGAT5BQ3V5L5 792 aa11.29□□□□□ -0.6
PABPN1-203ENST00000553960 MAP9Q49MG5 647 aa11.29□□□□□ -0.6
PABPN1-203ENST00000553960 ODF2Q5BJF6 829 aa11.29□□□□□ -0.6
PABPN1-203ENST00000553960 RELL1Q8IUW5 271 aa11.29□□□□□ -0.6
PABPN1-203ENST00000553960 MREGQ8N565 214 aa11.29□□□□□ -0.6
PABPN1-203ENST00000553960 TTC9BQ8N6N2 239 aa11.29□□□□□ -0.6
PABPN1-203ENST00000553960 CCDC89Q8N998 374 aa11.29□□□□□ -0.6
PABPN1-203ENST00000553960 PCDH19Q8TAB3 1148 aa11.29□□□□□ -0.6
PABPN1-203ENST00000553960 RNF139Q8WU17 664 aa11.29□□□□□ -0.6
PABPN1-203ENST00000553960 FBXO32Q969P5 355 aa11.29□□□□□ -0.6
PABPN1-203ENST00000553960 OLFM3Q96PB7 478 aa11.29□□□□□ -0.6
PABPN1-203ENST00000553960 CSPG4P5Q96PW8 444 aa11.29□□□□□ -0.6
PABPN1-203ENST00000553960 KRT12Q99456 494 aa11.29□□□□□ -0.6
PABPN1-203ENST00000553960 LRRC3Q9BY71 257 aa11.29□□□□□ -0.6
PABPN1-203ENST00000553960 DDX47Q9H0S4 455 aaKnown RBP11.29□□□□□ -0.6
PABPN1-203ENST00000553960 WDCPQ9H6R7 721 aa11.29□□□□□ -0.6
PABPN1-203ENST00000553960 TLR9Q9NR96 1032 aa11.29□□□□□ -0.6
PABPN1-203ENST00000553960 DDIT4Q9NX09 232 aa11.29□□□□□ -0.6
PABPN1-203ENST00000553960 OSER1Q9NX31 292 aa11.29□□□□□ -0.6
PABPN1-203ENST00000553960 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.29□□□□□ -0.6
PABPN1-203ENST00000553960 CWC15Q9P013 229 aaKnown RBP11.29□□□□□ -0.6
PABPN1-203ENST00000553960 WHRNQ9P202 907 aa11.29□□□□□ -0.6
PABPN1-203ENST00000553960 INSL5Q9Y5Q6 135 aa11.29□□□□□ -0.6
PABPN1-203ENST00000553960 OBSL1O75147 1896 aa11.28□□□□□ -0.6
PABPN1-203ENST00000553960 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.28□□□□□ -0.6
PABPN1-203ENST00000553960 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.28□□□□□ -0.6
PABPN1-203ENST00000553960 A0A1W2PQH9 124 aa11.28□□□□□ -0.6
PABPN1-203ENST00000553960 I6L893 689 aaPredicted RBP11.28□□□□□ -0.6
PABPN1-203ENST00000553960 PIK3R2O00459 728 aa11.28□□□□□ -0.6
PABPN1-203ENST00000553960 DCLK1O15075 740 aa11.28□□□□□ -0.6
PABPN1-203ENST00000553960 FGF10O15520 208 aaPredicted RBP11.28□□□□□ -0.6
PABPN1-203ENST00000553960 CST8O60676 142 aa11.28□□□□□ -0.6
PABPN1-203ENST00000553960 ECEL1O95672 775 aa11.28□□□□□ -0.6
PABPN1-203ENST00000553960 CXCL14O95715 111 aa11.28□□□□□ -0.6
PABPN1-203ENST00000553960 F11P03951 625 aa11.28□□□□□ -0.6
PABPN1-203ENST00000553960 TCF3P15923 654 aa11.28□□□□□ -0.6
PABPN1-203ENST00000553960 IBSPP21815 317 aaPredicted RBP11.28□□□□□ -0.6
PABPN1-203ENST00000553960 KLRC2P26717 231 aa11.28□□□□□ -0.6
PABPN1-203ENST00000553960 ELF1P32519 619 aa11.28□□□□□ -0.6
PABPN1-203ENST00000553960 MAGEA6P43360 314 aa11.28□□□□□ -0.6
PABPN1-203ENST00000553960 MAGEA10P43363 369 aaPredicted RBP11.28□□□□□ -0.6
PABPN1-203ENST00000553960 EPHB3P54753 998 aa11.28□□□□□ -0.6
PABPN1-203ENST00000553960 PITX1P78337 314 aaPredicted RBP11.28□□□□□ -0.6
PABPN1-203ENST00000553960 COG7P83436 770 aa11.28□□□□□ -0.6
PABPN1-203ENST00000553960 ADCY2Q08462 1091 aa11.28□□□□□ -0.6
PABPN1-203ENST00000553960 CAMK1Q14012 370 aa11.28□□□□□ -0.6
PABPN1-203ENST00000553960 RAB30Q15771 203 aa11.28□□□□□ -0.6
PABPN1-203ENST00000553960 KCNT1Q5JUK3 1230 aa11.28□□□□□ -0.6
PABPN1-203ENST00000553960 DAB2IPQ5VWQ8 1189 aa11.28□□□□□ -0.6
PABPN1-203ENST00000553960 NUGGCQ68CJ6 796 aa11.28□□□□□ -0.6
PABPN1-203ENST00000553960 AADACL2Q6P093 401 aa11.28□□□□□ -0.6
PABPN1-203ENST00000553960 TTC27Q6P3X3 843 aa11.28□□□□□ -0.6
PABPN1-203ENST00000553960 PDZD4Q76G19 769 aaPredicted RBP11.28□□□□□ -0.6
PABPN1-203ENST00000553960 MTERF4Q7Z6M4 381 aaKnown RBP11.28□□□□□ -0.6
PABPN1-203ENST00000553960 TAC4Q86UU9 113 aa11.28□□□□□ -0.6
PABPN1-203ENST00000553960 JAMLQ86YT9 394 aa11.28□□□□□ -0.6
PABPN1-203ENST00000553960 CCDC50Q8IVM0 306 aa11.28□□□□□ -0.6
PABPN1-203ENST00000553960 UNC45BQ8IWX7 931 aa11.28□□□□□ -0.6
PABPN1-203ENST00000553960 ZNF683Q8IZ20 524 aa11.28□□□□□ -0.6
PABPN1-203ENST00000553960 ALLCQ8N6M5 410 aa11.28□□□□□ -0.6
PABPN1-203ENST00000553960 CCDC185Q8N715 623 aa11.28□□□□□ -0.6
PABPN1-203ENST00000553960 BBOF1Q8ND07 529 aa11.28□□□□□ -0.6
PABPN1-203ENST00000553960 STKLD1Q8NE28 680 aa11.28□□□□□ -0.6
PABPN1-203ENST00000553960 SLC7A14Q8TBB6 771 aa11.28□□□□□ -0.6
PABPN1-203ENST00000553960 DPF3Q92784 378 aa11.28□□□□□ -0.6
PABPN1-203ENST00000553960 CAVIN3Q969G5 261 aa11.28□□□□□ -0.6
PABPN1-203ENST00000553960 RNF25Q96BH1 459 aaPredicted RBP11.28□□□□□ -0.6
PABPN1-203ENST00000553960 BTN2A3PQ96KV6 586 aa11.28□□□□□ -0.6
PABPN1-203ENST00000553960 FCRL2Q96LA5 508 aaPredicted RBP11.28□□□□□ -0.6
PABPN1-203ENST00000553960 PNKPQ96T60 521 aa11.28□□□□□ -0.6
PABPN1-203ENST00000553960 EPAS1Q99814 870 aa11.28□□□□□ -0.6
PABPN1-203ENST00000553960 AP1M1Q9BXS5 423 aa11.28□□□□□ -0.6
PABPN1-203ENST00000553960 PCDH9Q9HC56 1237 aa11.28□□□□□ -0.6
PABPN1-203ENST00000553960 SMARCAL1Q9NZC9 954 aa11.28□□□□□ -0.6
PABPN1-203ENST00000553960 PCSK1NQ9UHG2 260 aa11.28□□□□□ -0.6
PABPN1-203ENST00000553960 AMACRQ9UHK6 382 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms