RNA–Protein interactions for RNA: ENST00000520880.1

CTHRC1-204, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 4 BASIC

Gene CTHRC1, Length 560 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-204ENST00000520880 NXNQ6DKJ4 435 aa4.96□□□□□ -1.62
CTHRC1-204ENST00000520880 COLCA1Q6ZS62 124 aa4.96□□□□□ -1.62
CTHRC1-204ENST00000520880 CCDC149Q6ZUS6 474 aa4.96□□□□□ -1.62
CTHRC1-204ENST00000520880 PIM3Q86V86 326 aa4.96□□□□□ -1.62
CTHRC1-204ENST00000520880 TCEAL8Q8IYN2 117 aa4.96□□□□□ -1.62
CTHRC1-204ENST00000520880 FAM177A1Q8N128 213 aaPredicted RBP4.96□□□□□ -1.62
CTHRC1-204ENST00000520880 ZDHHC12Q96GR4 267 aa4.96□□□□□ -1.62
CTHRC1-204ENST00000520880 CAMK1GQ96NX5 476 aa4.96□□□□□ -1.62
CTHRC1-204ENST00000520880 SCNM1Q9BWG6 230 aa4.96□□□□□ -1.62
CTHRC1-204ENST00000520880 BRIP1Q9BX63 1249 aa4.96□□□□□ -1.62
CTHRC1-204ENST00000520880 NUAK2Q9H093 628 aa4.96□□□□□ -1.62
CTHRC1-204ENST00000520880 HPSEQ9Y251 543 aa4.96□□□□□ -1.62
CTHRC1-204ENST00000520880 DNMT1P26358 1616 aaKnown RBP4.96□□□□□ -1.62
CTHRC1-204ENST00000520880 PTPRKQ15262 1439 aa4.96□□□□□ -1.62
CTHRC1-204ENST00000520880 SETD5Q9C0A6 1442 aa4.96□□□□□ -1.62
CTHRC1-204ENST00000520880 CLSPNQ9HAW4 1339 aa4.96□□□□□ -1.62
CTHRC1-204ENST00000520880 ADGBQ8N7X0 1667 aa4.96□□□□□ -1.62
CTHRC1-204ENST00000520880 ERCC6L2Q5T890 1561 aa4.95□□□□□ -1.62
CTHRC1-204ENST00000520880 C2CD4BA6NLJ0 364 aa4.95□□□□□ -1.62
CTHRC1-204ENST00000520880 C16orf96A6NNT2 1141 aa4.95□□□□□ -1.62
CTHRC1-204ENST00000520880 B4DGG1 531 aa4.95□□□□□ -1.62
CTHRC1-204ENST00000520880 TULP3O75386 442 aa4.95□□□□□ -1.62
CTHRC1-204ENST00000520880 PLAUP00749 431 aa4.95□□□□□ -1.62
CTHRC1-204ENST00000520880 TMEM225BP0DP42 221 aa4.95□□□□□ -1.62
CTHRC1-204ENST00000520880 YY1P25490 414 aa4.95□□□□□ -1.62
CTHRC1-204ENST00000520880 JAK3P52333 1124 aa4.95□□□□□ -1.62
CTHRC1-204ENST00000520880 CCDC15Q0P6D6 951 aa4.95□□□□□ -1.62
CTHRC1-204ENST00000520880 MTAPQ13126 283 aa4.95□□□□□ -1.62
CTHRC1-204ENST00000520880 PPP2R5AQ15172 486 aa4.95□□□□□ -1.62
CTHRC1-204ENST00000520880 FAM110CQ1W6H9 321 aa4.95□□□□□ -1.62
CTHRC1-204ENST00000520880 EARS2Q5JPH6 523 aaKnown RBP4.95□□□□□ -1.62
CTHRC1-204ENST00000520880 MZT2AQ6P582 158 aa4.95□□□□□ -1.62
CTHRC1-204ENST00000520880 ZNF793Q6ZN11 406 aa4.95□□□□□ -1.62
CTHRC1-204ENST00000520880 TFAP2DQ7Z6R9 452 aa4.95□□□□□ -1.62
CTHRC1-204ENST00000520880 MSLNLQ96KJ4 702 aa4.95□□□□□ -1.62
CTHRC1-204ENST00000520880 FAM234AQ9H0X4 552 aa4.95□□□□□ -1.62
CTHRC1-204ENST00000520880 SAP30LQ9HAJ7 183 aa4.95□□□□□ -1.62
CTHRC1-204ENST00000520880 AGO4Q9HCK5 861 aaKnown RBP4.95□□□□□ -1.62
CTHRC1-204ENST00000520880 TROQ12816 1431 aaPredicted RBP4.95□□□□□ -1.62
CTHRC1-204ENST00000520880 MIA2Q96PC5 1412 aa4.95□□□□□ -1.62
CTHRC1-204ENST00000520880 CNTNAP2Q9UHC6 1331 aa4.95□□□□□ -1.62
CTHRC1-204ENST00000520880 GOLIM4O00461 696 aa4.94□□□□□ -1.62
CTHRC1-204ENST00000520880 TPP1O14773 563 aa4.94□□□□□ -1.62
CTHRC1-204ENST00000520880 MT-ND5P03915 603 aa4.94□□□□□ -1.62
CTHRC1-204ENST00000520880 FGF2P09038 288 aa4.94□□□□□ -1.62
CTHRC1-204ENST00000520880 TMIGD3P0DMS9 266 aaPredicted RBP4.94□□□□□ -1.62
CTHRC1-204ENST00000520880 PEX2P28328 305 aa4.94□□□□□ -1.62
CTHRC1-204ENST00000520880 WDR5P61964 334 aaKnown RBP4.94□□□□□ -1.62
CTHRC1-204ENST00000520880 DNASE1L3Q13609 305 aa4.94□□□□□ -1.62
CTHRC1-204ENST00000520880 KIAA0753Q2KHM9 967 aa4.94□□□□□ -1.62
CTHRC1-204ENST00000520880 PLEKHG6Q3KR16 790 aa4.94□□□□□ -1.62
CTHRC1-204ENST00000520880 KIAA1161Q6NSJ0 714 aa4.94□□□□□ -1.62
CTHRC1-204ENST00000520880 DARS2Q6PI48 645 aaKnown RBP4.94□□□□□ -1.62
CTHRC1-204ENST00000520880 P3H2Q8IVL5 708 aa4.94□□□□□ -1.62
CTHRC1-204ENST00000520880 MMP21Q8N119 569 aa4.94□□□□□ -1.62
CTHRC1-204ENST00000520880 PELI3Q8N2H9 469 aa4.94□□□□□ -1.62
CTHRC1-204ENST00000520880 FSTL5Q8N475 847 aaPredicted RBP4.94□□□□□ -1.62
CTHRC1-204ENST00000520880 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.94□□□□□ -1.62
CTHRC1-204ENST00000520880 MPLKIPQ8TAP9 179 aa4.94□□□□□ -1.62
CTHRC1-204ENST00000520880 TRMT61AQ96FX7 289 aaKnown RBP4.94□□□□□ -1.62
CTHRC1-204ENST00000520880 FCRL5Q96RD9 977 aa4.94□□□□□ -1.62
CTHRC1-204ENST00000520880 CINPQ9BW66 212 aaPredicted RBP4.94□□□□□ -1.62
CTHRC1-204ENST00000520880 ARL8BQ9NVJ2 186 aa4.94□□□□□ -1.62
CTHRC1-204ENST00000520880 ZNF212Q9UDV6 495 aa4.94□□□□□ -1.62
CTHRC1-204ENST00000520880 SIRT4Q9Y6E7 314 aaPredicted RBP4.94□□□□□ -1.62
CTHRC1-204ENST00000520880 HFM1A2PYH4 1435 aa4.94□□□□□ -1.62
CTHRC1-204ENST00000520880 PRG4Q92954 1404 aaPredicted RBP4.94□□□□□ -1.62
CTHRC1-204ENST00000520880 SPATA31A1Q5TZJ5 1347 aa4.94□□□□□ -1.62
CTHRC1-204ENST00000520880 KDM6BO15054 1643 aa4.94□□□□□ -1.62
CTHRC1-204ENST00000520880 F8W8V4 182 aa4.93□□□□□ -1.62
CTHRC1-204ENST00000520880 WDR47O94967 919 aa4.93□□□□□ -1.62
CTHRC1-204ENST00000520880 ZBED1O96006 694 aa4.93□□□□□ -1.62
CTHRC1-204ENST00000520880 HRGP04196 525 aa4.93□□□□□ -1.62
CTHRC1-204ENST00000520880 RAE1P78406 368 aaKnown RBP4.93□□□□□ -1.62
CTHRC1-204ENST00000520880 CHST15Q7LFX5 561 aaPredicted RBP4.93□□□□□ -1.62
CTHRC1-204ENST00000520880 AKNAQ7Z591 1439 aa4.93□□□□□ -1.62
CTHRC1-204ENST00000520880 ACRBPQ8NEB7 543 aa4.93□□□□□ -1.62
CTHRC1-204ENST00000520880 MBD3L2Q8NHZ7 208 aaPredicted RBP4.93□□□□□ -1.62
CTHRC1-204ENST00000520880 IPCEF1Q8WWN9 437 aaPredicted RBP4.93□□□□□ -1.62
CTHRC1-204ENST00000520880 LYZL4Q96KX0 146 aa4.93□□□□□ -1.62
CTHRC1-204ENST00000520880 SNX22Q96L94 193 aa4.93□□□□□ -1.62
CTHRC1-204ENST00000520880 FAM227BQ96M60 508 aa4.93□□□□□ -1.62
CTHRC1-204ENST00000520880 ZCWPW1Q9H0M4 648 aa4.93□□□□□ -1.62
CTHRC1-204ENST00000520880 SEMA4BQ9NPR2 832 aaPredicted RBP4.93□□□□□ -1.62
CTHRC1-204ENST00000520880 TBC1D23Q9NUY8 699 aa4.93□□□□□ -1.62
CTHRC1-204ENST00000520880 TMEM45AQ9NWC5 275 aa4.93□□□□□ -1.62
CTHRC1-204ENST00000520880 CDC42BPBQ9Y5S2 1711 aa4.93□□□□□ -1.62
CTHRC1-204ENST00000520880 EID1Q9Y6B2 187 aa4.93□□□□□ -1.62
CTHRC1-204ENST00000520880 PREX2Q70Z35 1606 aa4.93□□□□□ -1.62
CTHRC1-204ENST00000520880 ATP10BO94823 1461 aa4.93□□□□□ -1.62
CTHRC1-204ENST00000520880 NAIPQ13075 1403 aa4.92□□□□□ -1.62
CTHRC1-204ENST00000520880 SLC22A23A1A5C7 686 aa4.92□□□□□ -1.62
CTHRC1-204ENST00000520880 FAM90A8PA6NJQ4 464 aa4.92□□□□□ -1.62
CTHRC1-204ENST00000520880 SMAD6O43541 496 aaKnown RBP4.92□□□□□ -1.62
CTHRC1-204ENST00000520880 MGEA5O60502 916 aa4.92□□□□□ -1.62
CTHRC1-204ENST00000520880 CD63P08962 238 aa4.92□□□□□ -1.62
CTHRC1-204ENST00000520880 FAM90A13PP0C7W8 464 aa4.92□□□□□ -1.62
CTHRC1-204ENST00000520880 FAM90A24PP0C7X0 464 aa4.92□□□□□ -1.62
CTHRC1-204ENST00000520880 HOXA7P31268 230 aaPredicted RBP4.92□□□□□ -1.62
CTHRC1-204ENST00000520880 B4GALNT1Q00973 533 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms