RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 KLC4Q9NSK0 619 aa5.05□□□□□ -1.6
HMGB3P13-201ENST00000511263 HOXC10Q9NYD6 342 aa5.05□□□□□ -1.6
HMGB3P13-201ENST00000511263 EHD3Q9NZN3 535 aa5.05□□□□□ -1.6
HMGB3P13-201ENST00000511263 SEPT10Q9P0V9 454 aa5.05□□□□□ -1.6
HMGB3P13-201ENST00000511263 HESX1Q9UBX0 185 aa5.05□□□□□ -1.6
HMGB3P13-201ENST00000511263 ADAMTSL3P82987 1691 aa5.05□□□□□ -1.6
HMGB3P13-201ENST00000511263 INSRP06213 1382 aa5.04□□□□□ -1.6
HMGB3P13-201ENST00000511263 ANKRD36BQ8N2N9 1353 aa5.04□□□□□ -1.6
HMGB3P13-201ENST00000511263 CCDC7Q96M83 1385 aa5.04□□□□□ -1.6
HMGB3P13-201ENST00000511263 SETBP1Q9Y6X0 1596 aa5.04□□□□□ -1.6
HMGB3P13-201ENST00000511263 KIF7Q2M1P5 1343 aa5.04□□□□□ -1.6
HMGB3P13-201ENST00000511263 ADGRB3O60242 1522 aa5.04□□□□□ -1.6
HMGB3P13-201ENST00000511263 GOLGA6L10A0A0M3HER8 536 aa5.04□□□□□ -1.6
HMGB3P13-201ENST00000511263 GOLGA6L4A6NEF3 574 aa5.04□□□□□ -1.6
HMGB3P13-201ENST00000511263 PRSS29PA6NIE9 313 aa5.04□□□□□ -1.6
HMGB3P13-201ENST00000511263 TMEM110-MUSTN1A8MSY1 372 aa5.04□□□□□ -1.6
HMGB3P13-201ENST00000511263 FAM25EA8MYX2 175 aa5.04□□□□□ -1.6
HMGB3P13-201ENST00000511263 FOXN3O00409 490 aaPredicted RBP5.04□□□□□ -1.6
HMGB3P13-201ENST00000511263 RTN2O75298 545 aa5.04□□□□□ -1.6
HMGB3P13-201ENST00000511263 ONECUT2O95948 504 aa5.04□□□□□ -1.6
HMGB3P13-201ENST00000511263 ZBED1O96006 694 aa5.04□□□□□ -1.6
HMGB3P13-201ENST00000511263 HRGP04196 525 aa5.04□□□□□ -1.6
HMGB3P13-201ENST00000511263 GATA3P23771 443 aa5.04□□□□□ -1.6
HMGB3P13-201ENST00000511263 MCM3P25205 808 aa5.04□□□□□ -1.6
HMGB3P13-201ENST00000511263 HOXD10P28358 340 aa5.04□□□□□ -1.6
HMGB3P13-201ENST00000511263 PPIFP30405 207 aaKnown RBP5.04□□□□□ -1.6
HMGB3P13-201ENST00000511263 SLC7A1P30825 629 aa5.04□□□□□ -1.6
HMGB3P13-201ENST00000511263 CCNHP51946 323 aaPredicted RBP5.04□□□□□ -1.6
HMGB3P13-201ENST00000511263 CLNS1AP54105 237 aaKnown RBP5.04□□□□□ -1.6
HMGB3P13-201ENST00000511263 ROR2Q01974 943 aaKnown RBP5.04□□□□□ -1.6
HMGB3P13-201ENST00000511263 DYNC1I2Q13409 638 aaKnown RBP5.04□□□□□ -1.6
HMGB3P13-201ENST00000511263 ZNF169Q14929 603 aaPredicted RBP5.04□□□□□ -1.6
HMGB3P13-201ENST00000511263 C4orf46Q504U0 113 aa5.04□□□□□ -1.6
HMGB3P13-201ENST00000511263 ANKRD45Q5TZF3 282 aa5.04□□□□□ -1.6
HMGB3P13-201ENST00000511263 NAA16Q6N069 864 aaPredicted RBP5.04□□□□□ -1.6
HMGB3P13-201ENST00000511263 CCDC174Q6PII3 467 aa5.04□□□□□ -1.6
HMGB3P13-201ENST00000511263 SLC30A9Q6PML9 568 aa5.04□□□□□ -1.6
HMGB3P13-201ENST00000511263 TMCO3Q6UWJ1 677 aa5.04□□□□□ -1.6
HMGB3P13-201ENST00000511263 OLFML1Q6UWY5 402 aa5.04□□□□□ -1.6
HMGB3P13-201ENST00000511263 IQCA1Q86XH1 822 aa5.04□□□□□ -1.6
HMGB3P13-201ENST00000511263 CEP57Q86XR8 500 aa5.04□□□□□ -1.6
HMGB3P13-201ENST00000511263 CEP112Q8N8E3 955 aa5.04□□□□□ -1.6
HMGB3P13-201ENST00000511263 SMYD1Q8NB12 490 aa5.04□□□□□ -1.6
HMGB3P13-201ENST00000511263 SLC30A5Q8TAD4 765 aa5.04□□□□□ -1.6
HMGB3P13-201ENST00000511263 PPP1R35Q8TAP8 253 aa5.04□□□□□ -1.6
HMGB3P13-201ENST00000511263 MAGEC3Q8TD91 643 aa5.04□□□□□ -1.6
HMGB3P13-201ENST00000511263 ZFAND2BQ8WV99 257 aa5.04□□□□□ -1.6
HMGB3P13-201ENST00000511263 TAF4BQ92750 862 aa5.04□□□□□ -1.6
HMGB3P13-201ENST00000511263 PBKQ96KB5 322 aa5.04□□□□□ -1.6
HMGB3P13-201ENST00000511263 SLC46A1Q96NT5 459 aa5.04□□□□□ -1.6
HMGB3P13-201ENST00000511263 ALS2CR12Q96Q35 445 aa5.04□□□□□ -1.6
HMGB3P13-201ENST00000511263 CRAMP1Q96RY5 1269 aa5.04□□□□□ -1.6
HMGB3P13-201ENST00000511263 PTDSS2Q9BVG9 487 aa5.04□□□□□ -1.6
HMGB3P13-201ENST00000511263 TSGA10Q9BZW7 698 aa5.04□□□□□ -1.6
HMGB3P13-201ENST00000511263 ZNF518BQ9C0D4 1074 aa5.04□□□□□ -1.6
HMGB3P13-201ENST00000511263 TSPY26PQ9H489 355 aa5.04□□□□□ -1.6
HMGB3P13-201ENST00000511263 RPAP3Q9H6T3 665 aaPredicted RBP5.04□□□□□ -1.6
HMGB3P13-201ENST00000511263 KIAA1586Q9HCI6 787 aa5.04□□□□□ -1.6
HMGB3P13-201ENST00000511263 CHST12Q9NRB3 414 aa5.04□□□□□ -1.6
HMGB3P13-201ENST00000511263 XPR1Q9UBH6 696 aa5.04□□□□□ -1.6
HMGB3P13-201ENST00000511263 TLK1Q9UKI8 766 aa5.04□□□□□ -1.6
HMGB3P13-201ENST00000511263 L1RE1Q9UN81 338 aa5.04□□□□□ -1.6
HMGB3P13-201ENST00000511263 GMEB1Q9Y692 573 aa5.04□□□□□ -1.6
HMGB3P13-201ENST00000511263 TECPR2O15040 1411 aa5.04□□□□□ -1.6
HMGB3P13-201ENST00000511263 TMEM131LA2VDJ0 1609 aa5.04□□□□□ -1.6
HMGB3P13-201ENST00000511263 PIK3C2BO00750 1634 aa5.04□□□□□ -1.6
HMGB3P13-201ENST00000511263 CAMSAP1Q5T5Y3 1602 aa5.04□□□□□ -1.6
HMGB3P13-201ENST00000511263 METP08581 1390 aa5.04□□□□□ -1.6
HMGB3P13-201ENST00000511263 POLR1AO95602 1720 aaPredicted RBP5.03□□□□□ -1.6
HMGB3P13-201ENST00000511263 FRMPD2Q68DX3 1309 aaPredicted RBP5.03□□□□□ -1.6
HMGB3P13-201ENST00000511263 CCDC171Q6TFL3 1326 aa5.03□□□□□ -1.6
HMGB3P13-201ENST00000511263 CCDC78A2IDD5 438 aa5.03□□□□□ -1.6
HMGB3P13-201ENST00000511263 VSTM5A8MXK1 200 aa5.03□□□□□ -1.6
HMGB3P13-201ENST00000511263 BTN3A1O00481 513 aa5.03□□□□□ -1.6
HMGB3P13-201ENST00000511263 LIN7AO14910 233 aaPredicted RBP5.03□□□□□ -1.6
HMGB3P13-201ENST00000511263 ZBED4O75132 1171 aa5.03□□□□□ -1.6
HMGB3P13-201ENST00000511263 TBCAO75347 108 aaKnown RBP5.03□□□□□ -1.6
HMGB3P13-201ENST00000511263 ZFPL1O95159 310 aa5.03□□□□□ -1.6
HMGB3P13-201ENST00000511263 TTLL1O95922 423 aa5.03□□□□□ -1.6
HMGB3P13-201ENST00000511263 NUDT3O95989 172 aa5.03□□□□□ -1.6
HMGB3P13-201ENST00000511263 IDO1P14902 403 aa5.03□□□□□ -1.6
HMGB3P13-201ENST00000511263 PPP3CBP16298 524 aa5.03□□□□□ -1.6
HMGB3P13-201ENST00000511263 FERP16591 822 aa5.03□□□□□ -1.6
HMGB3P13-201ENST00000511263 EN2P19622 333 aaPredicted RBP5.03□□□□□ -1.6
HMGB3P13-201ENST00000511263 HNRNPH1P31943 449 aaKnown RBP5.03□□□□□ -1.6
HMGB3P13-201ENST00000511263 MAN1A1P33908 653 aa5.03□□□□□ -1.6
HMGB3P13-201ENST00000511263 GNALP38405 381 aa5.03□□□□□ -1.6
HMGB3P13-201ENST00000511263 GRIA3P42263 894 aa5.03□□□□□ -1.6
HMGB3P13-201ENST00000511263 RANBP1P43487 201 aa5.03□□□□□ -1.6
HMGB3P13-201ENST00000511263 ALDH9A1P49189 494 aa5.03□□□□□ -1.6
HMGB3P13-201ENST00000511263 ZBTB17Q13105 803 aa5.03□□□□□ -1.6
HMGB3P13-201ENST00000511263 SLC13A2Q13183 592 aa5.03□□□□□ -1.6
HMGB3P13-201ENST00000511263 BMPR2Q13873 1038 aa5.03□□□□□ -1.6
HMGB3P13-201ENST00000511263 EIF4A2Q14240 407 aaKnown RBP5.03□□□□□ -1.6
HMGB3P13-201ENST00000511263 GBX1Q14549 363 aa5.03□□□□□ -1.6
HMGB3P13-201ENST00000511263 POLD3Q15054 466 aaPredicted RBP5.03□□□□□ -1.6
HMGB3P13-201ENST00000511263 RCN1Q15293 331 aa5.03□□□□□ -1.6
HMGB3P13-201ENST00000511263 ZSCAN23Q3MJ62 389 aa5.03□□□□□ -1.6
HMGB3P13-201ENST00000511263 PRR16Q569H4 304 aa5.03□□□□□ -1.6
HMGB3P13-201ENST00000511263 AKNAD1Q5T1N1 836 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms