RNA–Protein interactions for RNA: ENST00000495955.5

GAPVD1-219, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 5,309 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-219ENST00000495955 PRAMEP78395 509 aa9.78□□□□□ -0.84
GAPVD1-219ENST00000495955 SHHQ15465 462 aa9.78□□□□□ -0.84
GAPVD1-219ENST00000495955 RTP2Q5QGT7 225 aa9.78□□□□□ -0.84
GAPVD1-219ENST00000495955 HP1BP3Q5SSJ5 553 aaPredicted RBP9.78□□□□□ -0.84
GAPVD1-219ENST00000495955 CACUL1Q86Y37 369 aa9.78□□□□□ -0.84
GAPVD1-219ENST00000495955 TDRD5Q8NAT2 981 aaKnown RBP9.78□□□□□ -0.84
GAPVD1-219ENST00000495955 SCYL1Q96KG9 808 aa9.78□□□□□ -0.84
GAPVD1-219ENST00000495955 TMEM209Q96SK2 561 aa9.78□□□□□ -0.84
GAPVD1-219ENST00000495955 INSL5Q9Y5Q6 135 aa9.78□□□□□ -0.84
GAPVD1-219ENST00000495955 RNF225M0QZC1 329 aaPredicted RBP9.77□□□□□ -0.84
GAPVD1-219ENST00000495955 ADH1CP00326 375 aa9.77□□□□□ -0.84
GAPVD1-219ENST00000495955 CORO1AP31146 461 aaKnown RBP9.77□□□□□ -0.84
GAPVD1-219ENST00000495955 PBX1P40424 430 aa9.77□□□□□ -0.84
GAPVD1-219ENST00000495955 SESN2P58004 480 aaPredicted RBP9.77□□□□□ -0.84
GAPVD1-219ENST00000495955 DHX9Q08211 1270 aaKnown RBP9.77□□□□□ -0.84
GAPVD1-219ENST00000495955 IZUMO3Q5VZ72 239 aa9.77□□□□□ -0.84
GAPVD1-219ENST00000495955 ZNF771Q7L3S4 317 aaPredicted RBP9.77□□□□□ -0.84
GAPVD1-219ENST00000495955 GRASPQ7Z6J2 395 aaPredicted RBP9.77□□□□□ -0.84
GAPVD1-219ENST00000495955 SLC13A5Q86YT5 568 aaPredicted RBP9.77□□□□□ -0.84
GAPVD1-219ENST00000495955 OR6P1Q8NGX9 317 aa9.77□□□□□ -0.84
GAPVD1-219ENST00000495955 JOSD2Q8TAC2 188 aa9.77□□□□□ -0.84
GAPVD1-219ENST00000495955 IRGQQ8WZA9 623 aa9.77□□□□□ -0.84
GAPVD1-219ENST00000495955 RAPGEF5Q92565 580 aa9.77□□□□□ -0.84
GAPVD1-219ENST00000495955 FMO2Q99518 471 aa9.77□□□□□ -0.84
GAPVD1-219ENST00000495955 ZNF510Q9Y2H8 683 aa9.77□□□□□ -0.84
GAPVD1-219ENST00000495955 F8W8V4 182 aa9.77□□□□□ -0.85
GAPVD1-219ENST00000495955 GIPC1O14908 333 aa9.77□□□□□ -0.85
GAPVD1-219ENST00000495955 ZNF263O14978 683 aa9.77□□□□□ -0.85
GAPVD1-219ENST00000495955 ATP5BP06576 529 aaKnown RBP9.77□□□□□ -0.85
GAPVD1-219ENST00000495955 FAM163BP0C2L3 166 aa9.77□□□□□ -0.85
GAPVD1-219ENST00000495955 FOSL2P15408 326 aa9.77□□□□□ -0.85
GAPVD1-219ENST00000495955 KRT33BQ14525 404 aa9.77□□□□□ -0.85
GAPVD1-219ENST00000495955 CRYBG2Q8N1P7 616 aa9.77□□□□□ -0.85
GAPVD1-219ENST00000495955 SNF8Q96H20 258 aa9.77□□□□□ -0.85
GAPVD1-219ENST00000495955 UBXN6Q9BZV1 441 aa9.77□□□□□ -0.85
GAPVD1-219ENST00000495955 SDCBP2Q9H190 292 aa9.77□□□□□ -0.85
GAPVD1-219ENST00000495955 TBX21Q9UL17 535 aa9.77□□□□□ -0.85
GAPVD1-219ENST00000495955 CPQQ9Y646 472 aa9.77□□□□□ -0.85
GAPVD1-219ENST00000495955 H0YGN5 161 aa9.77□□□□□ -0.85
GAPVD1-219ENST00000495955 PSMD3O43242 534 aa9.77□□□□□ -0.85
GAPVD1-219ENST00000495955 PMPCBO75439 489 aa9.77□□□□□ -0.85
GAPVD1-219ENST00000495955 OTUD4Q01804 1114 aaKnown RBP9.77□□□□□ -0.85
GAPVD1-219ENST00000495955 SLC25A52Q3SY17 297 aa9.77□□□□□ -0.85
GAPVD1-219ENST00000495955 CROCCP2Q86T23 111 aa9.77□□□□□ -0.85
GAPVD1-219ENST00000495955 HJURPQ8NCD3 748 aaPredicted RBP9.77□□□□□ -0.85
GAPVD1-219ENST00000495955 FAM107BQ9H098 131 aa9.77□□□□□ -0.85
GAPVD1-219ENST00000495955 ZFP14Q9HCL3 533 aa9.77□□□□□ -0.85
GAPVD1-219ENST00000495955 HCSTQ9UBK5 93 aa9.77□□□□□ -0.85
GAPVD1-219ENST00000495955 AJAP1Q9UKB5 411 aaPredicted RBP9.77□□□□□ -0.85
GAPVD1-219ENST00000495955 CCDC78A2IDD5 438 aa9.77□□□□□ -0.85
GAPVD1-219ENST00000495955 MAP3K13O43283 966 aa9.77□□□□□ -0.85
GAPVD1-219ENST00000495955 ITGB1P05556 798 aa9.77□□□□□ -0.85
GAPVD1-219ENST00000495955 MMP8P22894 467 aa9.77□□□□□ -0.85
GAPVD1-219ENST00000495955 GEMIN4P57678 1058 aaKnown RBP9.77□□□□□ -0.85
GAPVD1-219ENST00000495955 REXO1L1PQ8IX06 675 aa9.77□□□□□ -0.85
GAPVD1-219ENST00000495955 CPA6Q8N4T0 437 aa9.77□□□□□ -0.85
GAPVD1-219ENST00000495955 ZNF557Q8N988 423 aaPredicted RBP9.77□□□□□ -0.85
GAPVD1-219ENST00000495955 HERC2P3Q9BVR0 1158 aa9.77□□□□□ -0.85
GAPVD1-219ENST00000495955 CARD9Q9H257 536 aa9.77□□□□□ -0.85
GAPVD1-219ENST00000495955 PRDM12Q9H4Q4 367 aa9.77□□□□□ -0.85
GAPVD1-219ENST00000495955 NT5MQ9NPB1 228 aa9.77□□□□□ -0.85
GAPVD1-219ENST00000495955 PLK2Q9NYY3 685 aa9.77□□□□□ -0.85
GAPVD1-219ENST00000495955 TEX28O15482 410 aa9.76□□□□□ -0.85
GAPVD1-219ENST00000495955 DGKIO75912 1065 aa9.76□□□□□ -0.85
GAPVD1-219ENST00000495955 ASMTLO95671 621 aa9.76□□□□□ -0.85
GAPVD1-219ENST00000495955 KCNJ1P48048 391 aa9.76□□□□□ -0.85
GAPVD1-219ENST00000495955 SFSWAPQ12872 951 aaKnown RBP9.76□□□□□ -0.85
GAPVD1-219ENST00000495955 ATG4AQ8WYN0 398 aa9.76□□□□□ -0.85
GAPVD1-219ENST00000495955 CCT6BQ92526 530 aa9.76□□□□□ -0.85
GAPVD1-219ENST00000495955 SMYD2Q9NRG4 433 aa9.76□□□□□ -0.85
GAPVD1-219ENST00000495955 DUS2Q9NX74 493 aaKnown RBP9.76□□□□□ -0.85
GAPVD1-219ENST00000495955 RGS16O15492 202 aaPredicted RBP9.76□□□□□ -0.85
GAPVD1-219ENST00000495955 SCNN1BP51168 640 aa9.76□□□□□ -0.85
GAPVD1-219ENST00000495955 AFF1P51825 1210 aaKnown RBP9.76□□□□□ -0.85
GAPVD1-219ENST00000495955 DHX34Q14147 1143 aaKnown RBP9.76□□□□□ -0.85
GAPVD1-219ENST00000495955 TMEM240Q5SV17 173 aa9.76□□□□□ -0.85
GAPVD1-219ENST00000495955 DAB2IPQ5VWQ8 1189 aa9.76□□□□□ -0.85
GAPVD1-219ENST00000495955 B4GALNT4Q76KP1 1039 aa9.76□□□□□ -0.85
GAPVD1-219ENST00000495955 CCDC13Q8IYE1 715 aa9.76□□□□□ -0.85
GAPVD1-219ENST00000495955 C12orf76Q8N812 135 aaPredicted RBP9.76□□□□□ -0.85
GAPVD1-219ENST00000495955 SPATA4Q8NEY3 305 aa9.76□□□□□ -0.85
GAPVD1-219ENST00000495955 PPHLN1Q8NEY8 458 aaKnown RBP9.76□□□□□ -0.85
GAPVD1-219ENST00000495955 ZCWPW1Q9H0M4 648 aa9.76□□□□□ -0.85
GAPVD1-219ENST00000495955 PCDH10Q9P2E7 1040 aa9.76□□□□□ -0.85
GAPVD1-219ENST00000495955 TBC1D14Q9P2M4 693 aa9.76□□□□□ -0.85
GAPVD1-219ENST00000495955 NFU1Q9UMS0 254 aa9.76□□□□□ -0.85
GAPVD1-219ENST00000495955 F8W810 466 aa9.76□□□□□ -0.85
GAPVD1-219ENST00000495955 JCHAINP01591 159 aa9.76□□□□□ -0.85
GAPVD1-219ENST00000495955 HAPLN1P10915 354 aaPredicted RBP9.76□□□□□ -0.85
GAPVD1-219ENST00000495955 MSH2P43246 934 aa9.76□□□□□ -0.85
GAPVD1-219ENST00000495955 WNT7BP56706 349 aa9.76□□□□□ -0.85
GAPVD1-219ENST00000495955 COPS2P61201 443 aa9.76□□□□□ -0.85
GAPVD1-219ENST00000495955 SLMAPQ14BN4 828 aa9.76□□□□□ -0.85
GAPVD1-219ENST00000495955 COL13A1Q5TAT6 717 aaPredicted RBP9.76□□□□□ -0.85
GAPVD1-219ENST00000495955 TDHQ8IZJ6 230 aa9.76□□□□□ -0.85
GAPVD1-219ENST00000495955 CCDC110Q8TBZ0 833 aa9.76□□□□□ -0.85
GAPVD1-219ENST00000495955 SNRNP25Q9BV90 132 aaKnown RBP9.76□□□□□ -0.85
GAPVD1-219ENST00000495955 ZYG11BQ9C0D3 744 aa9.76□□□□□ -0.85
GAPVD1-219ENST00000495955 CRISPLD2Q9H0B8 497 aa9.76□□□□□ -0.85
GAPVD1-219ENST00000495955 PAK5Q9P286 719 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms