RNA–Protein interactions for RNA: ENST00000492650.1

VPS36-205, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 5

Gene VPS36, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-205ENST00000492650 PRAMEF2O60811 474 aa3.88□□□□□ -1.79
VPS36-205ENST00000492650 PLAUP00749 431 aa3.88□□□□□ -1.79
VPS36-205ENST00000492650 IFIT2P09913 472 aaKnown RBP3.88□□□□□ -1.79
VPS36-205ENST00000492650 IL1R1P14778 569 aa3.88□□□□□ -1.79
VPS36-205ENST00000492650 RBL1P28749 1068 aa3.88□□□□□ -1.79
VPS36-205ENST00000492650 CARSP49589 748 aaKnown RBP3.88□□□□□ -1.79
VPS36-205ENST00000492650 THBS3P49746 956 aa3.88□□□□□ -1.79
VPS36-205ENST00000492650 HTR6P50406 440 aa3.88□□□□□ -1.79
VPS36-205ENST00000492650 JAK3P52333 1124 aa3.88□□□□□ -1.79
VPS36-205ENST00000492650 SRSF1Q07955 248 aaKnown RBP eCLIP3.88□□□□□ -1.79
VPS36-205ENST00000492650 SEMA3AQ14563 771 aa3.88□□□□□ -1.79
VPS36-205ENST00000492650 KIAA0753Q2KHM9 967 aa3.88□□□□□ -1.79
VPS36-205ENST00000492650 EARS2Q5JPH6 523 aaKnown RBP3.88□□□□□ -1.79
VPS36-205ENST00000492650 DAB2IPQ5VWQ8 1189 aa3.88□□□□□ -1.79
VPS36-205ENST00000492650 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.88□□□□□ -1.79
VPS36-205ENST00000492650 MEPCEQ7L2J0 689 aaKnown RBP3.88□□□□□ -1.79
VPS36-205ENST00000492650 UBE2Q1Q7Z7E8 422 aa3.88□□□□□ -1.79
VPS36-205ENST00000492650 SESTD1Q86VW0 696 aa3.88□□□□□ -1.79
VPS36-205ENST00000492650 MMP21Q8N119 569 aa3.88□□□□□ -1.79
VPS36-205ENST00000492650 MAGEB6Q8N7X4 407 aa3.88□□□□□ -1.79
VPS36-205ENST00000492650 MPLKIPQ8TAP9 179 aa3.88□□□□□ -1.79
VPS36-205ENST00000492650 LYZL4Q96KX0 146 aa3.88□□□□□ -1.79
VPS36-205ENST00000492650 PAGR1Q9BTK6 254 aa3.88□□□□□ -1.79
VPS36-205ENST00000492650 TM2D2Q9BX73 214 aa3.88□□□□□ -1.79
VPS36-205ENST00000492650 PPCSQ9HAB8 311 aa3.88□□□□□ -1.79
VPS36-205ENST00000492650 PTPRHQ9HD43 1115 aa3.88□□□□□ -1.79
VPS36-205ENST00000492650 TBC1D23Q9NUY8 699 aa3.88□□□□□ -1.79
VPS36-205ENST00000492650 NRBP1Q9UHY1 535 aa3.88□□□□□ -1.79
VPS36-205ENST00000492650 LZTS1Q9Y250 596 aa3.88□□□□□ -1.79
VPS36-205ENST00000492650 HPSEQ9Y251 543 aa3.88□□□□□ -1.79
VPS36-205ENST00000492650 HEMK1Q9Y5R4 338 aaPredicted RBP3.88□□□□□ -1.79
VPS36-205ENST00000492650 FAM90A8PA6NJQ4 464 aa3.87□□□□□ -1.79
VPS36-205ENST00000492650 ZNF500O60304 480 aaPredicted RBP3.87□□□□□ -1.79
VPS36-205ENST00000492650 MGEA5O60502 916 aa3.87□□□□□ -1.79
VPS36-205ENST00000492650 FAM90A13PP0C7W8 464 aa3.87□□□□□ -1.79
VPS36-205ENST00000492650 FAM90A24PP0C7X0 464 aa3.87□□□□□ -1.79
VPS36-205ENST00000492650 TMIGD3P0DMS9 266 aaPredicted RBP3.87□□□□□ -1.79
VPS36-205ENST00000492650 MYF5P13349 255 aa3.87□□□□□ -1.79
VPS36-205ENST00000492650 TRIM27P14373 513 aa3.87□□□□□ -1.79
VPS36-205ENST00000492650 GALNSP34059 522 aa3.87□□□□□ -1.79
VPS36-205ENST00000492650 TRAPPC10P48553 1259 aa3.87□□□□□ -1.79
VPS36-205ENST00000492650 CLCA4Q14CN2 919 aa3.87□□□□□ -1.79
VPS36-205ENST00000492650 POLD3Q15054 466 aaPredicted RBP3.87□□□□□ -1.79
VPS36-205ENST00000492650 MANEAQ5SRI9 462 aa3.87□□□□□ -1.79
VPS36-205ENST00000492650 MANEALQ5VSG8 457 aa3.87□□□□□ -1.79
VPS36-205ENST00000492650 ZNF280DQ6N043 979 aa3.87□□□□□ -1.79
VPS36-205ENST00000492650 ZNF549Q6P9A3 640 aa3.87□□□□□ -1.79
VPS36-205ENST00000492650 DARS2Q6PI48 645 aaKnown RBP3.87□□□□□ -1.79
VPS36-205ENST00000492650 LVRNQ6Q4G3 990 aa3.87□□□□□ -1.79
VPS36-205ENST00000492650 FAM156AQ8NDB6 213 aa3.87□□□□□ -1.79
VPS36-205ENST00000492650 PIGKQ92643 395 aa3.87□□□□□ -1.79
VPS36-205ENST00000492650 TRMT61AQ96FX7 289 aaKnown RBP3.87□□□□□ -1.79
VPS36-205ENST00000492650 APIPQ96GX9 242 aa3.87□□□□□ -1.79
VPS36-205ENST00000492650 PRR11Q96HE9 360 aaPredicted RBP3.87□□□□□ -1.79
VPS36-205ENST00000492650 HIPK2Q9H2X6 1198 aa3.87□□□□□ -1.79
VPS36-205ENST00000492650 ZHX3Q9H4I2 956 aa3.87□□□□□ -1.79
VPS36-205ENST00000492650 VPS45Q9NRW7 570 aa3.87□□□□□ -1.79
VPS36-205ENST00000492650 TMEM45AQ9NWC5 275 aa3.87□□□□□ -1.79
VPS36-205ENST00000492650 ZNF69Q9UC07 566 aa3.87□□□□□ -1.79
VPS36-205ENST00000492650 ZNF212Q9UDV6 495 aa3.87□□□□□ -1.79
VPS36-205ENST00000492650 VPS4AQ9UN37 437 aa3.87□□□□□ -1.79
VPS36-205ENST00000492650 C2CD4BA6NLJ0 364 aa3.86□□□□□ -1.79
VPS36-205ENST00000492650 A6NNZ2 444 aa3.86□□□□□ -1.79
VPS36-205ENST00000492650 GOLIM4O00461 696 aa3.86□□□□□ -1.79
VPS36-205ENST00000492650 RRHO14718 337 aa3.86□□□□□ -1.79
VPS36-205ENST00000492650 USP12O75317 370 aa3.86□□□□□ -1.79
VPS36-205ENST00000492650 SYF2O95926 243 aaKnown RBP3.86□□□□□ -1.79
VPS36-205ENST00000492650 NBPF7P0C2Y1 421 aaPredicted RBP3.86□□□□□ -1.79
VPS36-205ENST00000492650 IL6STP40189 918 aaPredicted RBP3.86□□□□□ -1.79
VPS36-205ENST00000492650 CDKN2AP42771 156 aaKnown RBP3.86□□□□□ -1.79
VPS36-205ENST00000492650 HTR3AP46098 478 aa3.86□□□□□ -1.79
VPS36-205ENST00000492650 COPAP53621 1224 aa3.86□□□□□ -1.79
VPS36-205ENST00000492650 NANOS2P60321 138 aaKnown RBP3.86□□□□□ -1.79
VPS36-205ENST00000492650 WDR5P61964 334 aaKnown RBP3.86□□□□□ -1.79
VPS36-205ENST00000492650 MTA1Q13330 715 aa3.86□□□□□ -1.79
VPS36-205ENST00000492650 FAM83BQ5T0W9 1011 aa3.86□□□□□ -1.79
VPS36-205ENST00000492650 ERAP2Q6P179 960 aa3.86□□□□□ -1.79
VPS36-205ENST00000492650 SDR16C5Q8N3Y7 309 aa3.86□□□□□ -1.79
VPS36-205ENST00000492650 TEX19Q8NA77 164 aa3.86□□□□□ -1.79
VPS36-205ENST00000492650 IGFBPL1Q8WX77 278 aa3.86□□□□□ -1.79
VPS36-205ENST00000492650 SLC25A28Q96A46 364 aa3.86□□□□□ -1.79
VPS36-205ENST00000492650 ZDHHC12Q96GR4 267 aa3.86□□□□□ -1.79
VPS36-205ENST00000492650 THOC3Q96J01 351 aaKnown RBP3.86□□□□□ -1.79
VPS36-205ENST00000492650 SNX22Q96L94 193 aa3.86□□□□□ -1.79
VPS36-205ENST00000492650 NLRP4Q96MN2 994 aa3.86□□□□□ -1.79
VPS36-205ENST00000492650 FCRL5Q96RD9 977 aa3.86□□□□□ -1.79
VPS36-205ENST00000492650 OBP2AQ9NY56 170 aa3.86□□□□□ -1.79
VPS36-205ENST00000492650 SIRT4Q9Y6E7 314 aaPredicted RBP3.86□□□□□ -1.79
VPS36-205ENST00000492650 SPATA31A1Q5TZJ5 1347 aa3.86□□□□□ -1.79
VPS36-205ENST00000492650 IGLV5-39A0A0G2JS06 123 aa3.85□□□□□ -1.79
VPS36-205ENST00000492650 TCEA3O75764 348 aa3.85□□□□□ -1.79
VPS36-205ENST00000492650 WDR47O94967 919 aa3.85□□□□□ -1.79
VPS36-205ENST00000492650 TOMM40O96008 361 aa3.85□□□□□ -1.79
VPS36-205ENST00000492650 MT-ND5P03915 603 aa3.85□□□□□ -1.79
VPS36-205ENST00000492650 MYL3P08590 195 aa3.85□□□□□ -1.79
VPS36-205ENST00000492650 VPS41P49754 854 aa3.85□□□□□ -1.79
VPS36-205ENST00000492650 B4GALNT1Q00973 533 aa3.85□□□□□ -1.79
VPS36-205ENST00000492650 PICALMQ13492 652 aa3.85□□□□□ -1.79
VPS36-205ENST00000492650 DNASE1L3Q13609 305 aa3.85□□□□□ -1.79
VPS36-205ENST00000492650 ERV3-1Q14264 604 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms