RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 PFKFB3Q16875 520 aaPredicted RBP5.6□□□□□ -1.51
HMGB1P38-201ENST00000490557 PIK3AP1Q6ZUJ8 805 aa5.6□□□□□ -1.51
HMGB1P38-201ENST00000490557 LINC01465Q8N7H1 131 aa5.6□□□□□ -1.51
HMGB1P38-201ENST00000490557 SEMA6DQ8NFY4 1073 aa5.6□□□□□ -1.51
HMGB1P38-201ENST00000490557 OR52L2PQ8NGH6 319 aa5.6□□□□□ -1.51
HMGB1P38-201ENST00000490557 CCT6BQ92526 530 aa5.6□□□□□ -1.51
HMGB1P38-201ENST00000490557 PRR11Q96HE9 360 aaPredicted RBP5.6□□□□□ -1.51
HMGB1P38-201ENST00000490557 RITA1Q96K30 269 aa5.6□□□□□ -1.51
HMGB1P38-201ENST00000490557 KATNAL1Q9BW62 490 aa5.6□□□□□ -1.51
HMGB1P38-201ENST00000490557 BRD8Q9H0E9 1235 aa5.6□□□□□ -1.51
HMGB1P38-201ENST00000490557 TP63Q9H3D4 680 aaPredicted RBP5.6□□□□□ -1.51
HMGB1P38-201ENST00000490557 FSCN3Q9NQT6 498 aa5.6□□□□□ -1.51
HMGB1P38-201ENST00000490557 ARL8BQ9NVJ2 186 aa5.6□□□□□ -1.51
HMGB1P38-201ENST00000490557 FZD4Q9ULV1 537 aa5.6□□□□□ -1.51
HMGB1P38-201ENST00000490557 FNDC1Q4ZHG4 1894 aaPredicted RBP5.6□□□□□ -1.51
HMGB1P38-201ENST00000490557 TCRBV5S1A1TA0A578 114 aa5.59□□□□□ -1.51
HMGB1P38-201ENST00000490557 PRRT4C9JH25 899 aa5.59□□□□□ -1.51
HMGB1P38-201ENST00000490557 H3BNC9 293 aa5.59□□□□□ -1.51
HMGB1P38-201ENST00000490557 TCEA3O75764 348 aa5.59□□□□□ -1.51
HMGB1P38-201ENST00000490557 CER1O95813 267 aa5.59□□□□□ -1.51
HMGB1P38-201ENST00000490557 KLRK1P26718 216 aa5.59□□□□□ -1.51
HMGB1P38-201ENST00000490557 DUSP1P28562 367 aa5.59□□□□□ -1.51
HMGB1P38-201ENST00000490557 FAM83BQ5T0W9 1011 aa5.59□□□□□ -1.51
HMGB1P38-201ENST00000490557 ANKRD40Q6AI12 368 aa5.59□□□□□ -1.51
HMGB1P38-201ENST00000490557 MSANTD2Q6P1R3 559 aa5.59□□□□□ -1.51
HMGB1P38-201ENST00000490557 RANBP10Q6VN20 620 aa5.59□□□□□ -1.51
HMGB1P38-201ENST00000490557 SLC22A17Q8WUG5 538 aa5.59□□□□□ -1.51
HMGB1P38-201ENST00000490557 TRIM63Q969Q1 353 aa5.59□□□□□ -1.51
HMGB1P38-201ENST00000490557 RTKNQ9BST9 563 aa5.59□□□□□ -1.51
HMGB1P38-201ENST00000490557 POLR3GLQ9BT43 218 aa5.59□□□□□ -1.51
HMGB1P38-201ENST00000490557 CCDC134Q9H6E4 229 aa5.59□□□□□ -1.51
HMGB1P38-201ENST00000490557 RXFP3Q9NSD7 469 aa5.59□□□□□ -1.51
HMGB1P38-201ENST00000490557 ABHD10Q9NUJ1 306 aa5.59□□□□□ -1.51
HMGB1P38-201ENST00000490557 HERC5Q9UII4 1024 aaKnown RBP5.59□□□□□ -1.51
HMGB1P38-201ENST00000490557 HEMK1Q9Y5R4 338 aaPredicted RBP5.59□□□□□ -1.51
HMGB1P38-201ENST00000490557 CCDC187A0A096LP49 1063 aa5.58□□□□□ -1.52
HMGB1P38-201ENST00000490557 TISP43B9A030 160 aa5.58□□□□□ -1.52
HMGB1P38-201ENST00000490557 ACKR2O00590 384 aa5.58□□□□□ -1.52
HMGB1P38-201ENST00000490557 CYP2D6P10635 497 aa5.58□□□□□ -1.52
HMGB1P38-201ENST00000490557 SLC8A1P32418 973 aa5.58□□□□□ -1.52
HMGB1P38-201ENST00000490557 THBS4P35443 961 aa5.58□□□□□ -1.52
HMGB1P38-201ENST00000490557 SERPINF1P36955 418 aa5.58□□□□□ -1.52
HMGB1P38-201ENST00000490557 VPS41P49754 854 aa5.58□□□□□ -1.52
HMGB1P38-201ENST00000490557 PROK1P58294 105 aa5.58□□□□□ -1.52
HMGB1P38-201ENST00000490557 GALNT1Q10472 559 aaPredicted RBP5.58□□□□□ -1.52
HMGB1P38-201ENST00000490557 ZNF268Q14587 947 aaPredicted RBP5.58□□□□□ -1.52
HMGB1P38-201ENST00000490557 AWAT1Q58HT5 328 aa5.58□□□□□ -1.52
HMGB1P38-201ENST00000490557 ANO1Q5XXA6 986 aa5.58□□□□□ -1.52
HMGB1P38-201ENST00000490557 DPY19L2P1Q6NXN4 242 aa5.58□□□□□ -1.52
HMGB1P38-201ENST00000490557 ACSM6Q6P461 480 aa5.58□□□□□ -1.52
HMGB1P38-201ENST00000490557 SYCE2Q6PIF2 218 aa5.58□□□□□ -1.52
HMGB1P38-201ENST00000490557 TRABD2AQ86V40 505 aa5.58□□□□□ -1.52
HMGB1P38-201ENST00000490557 MYCT1Q8N699 235 aa5.58□□□□□ -1.52
HMGB1P38-201ENST00000490557 RUBCNQ92622 972 aa5.58□□□□□ -1.52
HMGB1P38-201ENST00000490557 AKAP1Q92667 903 aaKnown RBP eCLIP5.58□□□□□ -1.52
HMGB1P38-201ENST00000490557 ZNF764Q96H86 408 aaPredicted RBP5.58□□□□□ -1.52
HMGB1P38-201ENST00000490557 REXO5Q96IC2 774 aaKnown RBP5.58□□□□□ -1.52
HMGB1P38-201ENST00000490557 RNF26Q9BY78 433 aaPredicted RBP5.58□□□□□ -1.52
HMGB1P38-201ENST00000490557 PTPRHQ9HD43 1115 aa5.58□□□□□ -1.52
HMGB1P38-201ENST00000490557 GAR1Q9NY12 217 aaKnown RBP5.58□□□□□ -1.52
HMGB1P38-201ENST00000490557 SCAF8Q9UPN6 1271 aaKnown RBP5.58□□□□□ -1.52
HMGB1P38-201ENST00000490557 MASP2O00187 686 aa5.57□□□□□ -1.52
HMGB1P38-201ENST00000490557 RPP40O75818 363 aaKnown RBP5.57□□□□□ -1.52
HMGB1P38-201ENST00000490557 ACTL6BO94805 426 aa5.57□□□□□ -1.52
HMGB1P38-201ENST00000490557 NHLRC4P0CG21 123 aaPredicted RBP5.57□□□□□ -1.52
HMGB1P38-201ENST00000490557 CYP2A6P11509 494 aaPredicted RBP5.57□□□□□ -1.52
HMGB1P38-201ENST00000490557 CERS1P27544 350 aa5.57□□□□□ -1.52
HMGB1P38-201ENST00000490557 TFF2Q03403 129 aa5.57□□□□□ -1.52
HMGB1P38-201ENST00000490557 RNASELQ05823 741 aaKnown RBP5.57□□□□□ -1.52
HMGB1P38-201ENST00000490557 SLC14A1Q13336 389 aa5.57□□□□□ -1.52
HMGB1P38-201ENST00000490557 KPNB1Q14974 876 aaKnown RBP5.57□□□□□ -1.52
HMGB1P38-201ENST00000490557 RPS6KA2Q15349 733 aa5.57□□□□□ -1.52
HMGB1P38-201ENST00000490557 BTBD16Q32M84 506 aa5.57□□□□□ -1.52
HMGB1P38-201ENST00000490557 MIS18BP1Q6P0N0 1132 aa5.57□□□□□ -1.52
HMGB1P38-201ENST00000490557 ZNF782Q6ZMW2 699 aaPredicted RBP5.57□□□□□ -1.52
HMGB1P38-201ENST00000490557 RAB11FIP2Q7L804 512 aa5.57□□□□□ -1.52
HMGB1P38-201ENST00000490557 CACNA2D3Q8IZS8 1091 aa5.57□□□□□ -1.52
HMGB1P38-201ENST00000490557 HMGB4Q8WW32 186 aa5.57□□□□□ -1.52
HMGB1P38-201ENST00000490557 RSC1A1Q92681 617 aa5.57□□□□□ -1.52
HMGB1P38-201ENST00000490557 EID2BQ96D98 161 aa5.57□□□□□ -1.52
HMGB1P38-201ENST00000490557 C5orf34Q96MH7 638 aa5.57□□□□□ -1.52
HMGB1P38-201ENST00000490557 EFHD1Q9BUP0 239 aa5.57□□□□□ -1.52
HMGB1P38-201ENST00000490557 TRIM2Q9C040 744 aa5.57□□□□□ -1.52
HMGB1P38-201ENST00000490557 NUAK2Q9H093 628 aa5.57□□□□□ -1.52
HMGB1P38-201ENST00000490557 PCDHB7Q9Y5E2 793 aa5.57□□□□□ -1.52
HMGB1P38-201ENST00000490557 SPATA31A1Q5TZJ5 1347 aa5.56□□□□□ -1.52
HMGB1P38-201ENST00000490557 HMX3A6NHT5 357 aa5.56□□□□□ -1.52
HMGB1P38-201ENST00000490557 EFCAB8A8MWE9 144 aa5.56□□□□□ -1.52
HMGB1P38-201ENST00000490557 KIF28PB7ZC32 967 aa5.56□□□□□ -1.52
HMGB1P38-201ENST00000490557 PPP6R2O75170 966 aa5.56□□□□□ -1.52
HMGB1P38-201ENST00000490557 LARGE1O95461 756 aa5.56□□□□□ -1.52
HMGB1P38-201ENST00000490557 GYS1P13807 737 aa5.56□□□□□ -1.52
HMGB1P38-201ENST00000490557 TACR3P29371 465 aa5.56□□□□□ -1.52
HMGB1P38-201ENST00000490557 AP2B1P63010 937 aa5.56□□□□□ -1.52
HMGB1P38-201ENST00000490557 GLE1Q53GS7 698 aaKnown RBP5.56□□□□□ -1.52
HMGB1P38-201ENST00000490557 KIAA1614Q5VZ46 1190 aa5.56□□□□□ -1.52
HMGB1P38-201ENST00000490557 SULT6B1Q6IMI4 303 aa5.56□□□□□ -1.52
HMGB1P38-201ENST00000490557 WDR93Q6P2C0 686 aa5.56□□□□□ -1.52
HMGB1P38-201ENST00000490557 RINLQ6ZS11 566 aa5.56□□□□□ -1.52
HMGB1P38-201ENST00000490557 OSR1Q8TAX0 266 aaPredicted RBP5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms