RNA–Protein interactions for RNA: ENST00000487674.1

PRKCB-208, Transcript of protein kinase C beta, humanhuman

TSL 2

Gene PRKCB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-208ENST00000487674 PRRT4C9JH25 899 aa8.97□□□□□ -0.97
PRKCB-208ENST00000487674 RNF223E7ERA6 249 aa8.97□□□□□ -0.97
PRKCB-208ENST00000487674 NPC1O15118 1278 aa8.97□□□□□ -0.97
PRKCB-208ENST00000487674 GPR37O15354 613 aa8.97□□□□□ -0.97
PRKCB-208ENST00000487674 PENKP01210 267 aaPredicted RBP8.97□□□□□ -0.97
PRKCB-208ENST00000487674 CISD3P0C7P0 127 aa8.97□□□□□ -0.97
PRKCB-208ENST00000487674 C1QTNF9P0C862 333 aa8.97□□□□□ -0.97
PRKCB-208ENST00000487674 RPL13P26373 211 aaKnown RBP8.97□□□□□ -0.97
PRKCB-208ENST00000487674 GTF2H1P32780 548 aa8.97□□□□□ -0.97
PRKCB-208ENST00000487674 PSMC2P35998 433 aaKnown RBP8.97□□□□□ -0.97
PRKCB-208ENST00000487674 KRT85P78386 507 aa8.97□□□□□ -0.97
PRKCB-208ENST00000487674 ZNF33AQ06730 810 aa8.97□□□□□ -0.97
PRKCB-208ENST00000487674 DPYDQ12882 1025 aa8.97□□□□□ -0.97
PRKCB-208ENST00000487674 SEMA3BQ13214 749 aa8.97□□□□□ -0.97
PRKCB-208ENST00000487674 STARD3Q14849 445 aa8.97□□□□□ -0.97
PRKCB-208ENST00000487674 ZCWPW2Q504Y3 356 aa8.97□□□□□ -0.97
PRKCB-208ENST00000487674 KRT39Q6A163 491 aa8.97□□□□□ -0.97
PRKCB-208ENST00000487674 BLOC1S3Q6QNY0 202 aa8.97□□□□□ -0.97
PRKCB-208ENST00000487674 SCD5Q86SK9 330 aa8.97□□□□□ -0.97
PRKCB-208ENST00000487674 PIP4P1Q86T03 277 aa8.97□□□□□ -0.97
PRKCB-208ENST00000487674 GUF1Q8N442 669 aaKnown RBP8.97□□□□□ -0.97
PRKCB-208ENST00000487674 HDDC3Q8N4P3 179 aa8.97□□□□□ -0.97
PRKCB-208ENST00000487674 TTC39CQ8N584 583 aa8.97□□□□□ -0.97
PRKCB-208ENST00000487674 BHMTQ93088 406 aa8.97□□□□□ -0.97
PRKCB-208ENST00000487674 ZNF775Q96BV0 537 aaPredicted RBP8.97□□□□□ -0.97
PRKCB-208ENST00000487674 FAXDC2Q96IV6 333 aa8.97□□□□□ -0.97
PRKCB-208ENST00000487674 MRGPRX1Q96LB2 322 aa8.97□□□□□ -0.97
PRKCB-208ENST00000487674 HSPA12BQ96MM6 686 aa8.97□□□□□ -0.97
PRKCB-208ENST00000487674 DUSP16Q9BY84 665 aa8.97□□□□□ -0.97
PRKCB-208ENST00000487674 FAM124BQ9H5Z6 455 aaPredicted RBP8.97□□□□□ -0.97
PRKCB-208ENST00000487674 CACNA2D2Q9NY47 1150 aa8.97□□□□□ -0.97
PRKCB-208ENST00000487674 NUDT5Q9UKK9 219 aa8.97□□□□□ -0.97
PRKCB-208ENST00000487674 ZNF510Q9Y2H8 683 aa8.97□□□□□ -0.97
PRKCB-208ENST00000487674 SLC27A6Q9Y2P4 619 aa8.97□□□□□ -0.97
PRKCB-208ENST00000487674 PCDHB3Q9Y5E6 796 aa8.97□□□□□ -0.97
PRKCB-208ENST00000487674 RAD54BQ9Y620 910 aa8.97□□□□□ -0.97
PRKCB-208ENST00000487674 USP3Q9Y6I4 520 aa8.97□□□□□ -0.97
PRKCB-208ENST00000487674 FRYQ5TBA9 3013 aa8.97□□□□□ -0.97
PRKCB-208ENST00000487674 CKAP5Q14008 2032 aa8.97□□□□□ -0.97
PRKCB-208ENST00000487674 PCNX2A6NKB5 2137 aa8.96□□□□□ -0.97
PRKCB-208ENST00000487674 A0A1W2PQD8 194 aa8.96□□□□□ -0.98
PRKCB-208ENST00000487674 OPHN1O60890 802 aa8.96□□□□□ -0.98
PRKCB-208ENST00000487674 NDUFS2O75306 463 aa8.96□□□□□ -0.98
PRKCB-208ENST00000487674 KLKB1P03952 638 aa8.96□□□□□ -0.98
PRKCB-208ENST00000487674 SYPP08247 313 aa8.96□□□□□ -0.98
PRKCB-208ENST00000487674 SPINK2P20155 84 aa8.96□□□□□ -0.98
PRKCB-208ENST00000487674 CHKAP35790 457 aa8.96□□□□□ -0.98
PRKCB-208ENST00000487674 SLC19A1P41440 591 aa8.96□□□□□ -0.98
PRKCB-208ENST00000487674 MXI1P50539 228 aa8.96□□□□□ -0.98
PRKCB-208ENST00000487674 NDUFA8P51970 172 aa8.96□□□□□ -0.98
PRKCB-208ENST00000487674 ZNF132P52740 706 aa8.96□□□□□ -0.98
PRKCB-208ENST00000487674 MFAP3P55082 362 aa8.96□□□□□ -0.98
PRKCB-208ENST00000487674 MCCD1P59942 119 aaPredicted RBP8.96□□□□□ -0.98
PRKCB-208ENST00000487674 COG7P83436 770 aa8.96□□□□□ -0.98
PRKCB-208ENST00000487674 EDRF1Q3B7T1 1238 aa8.96□□□□□ -0.98
PRKCB-208ENST00000487674 PPP1R26Q5T8A7 1209 aaPredicted RBP8.96□□□□□ -0.98
PRKCB-208ENST00000487674 FYB2Q5VWT5 728 aa8.96□□□□□ -0.98
PRKCB-208ENST00000487674 KIAA1324Q6UXG2 1013 aaKnown RBP8.96□□□□□ -0.98
PRKCB-208ENST00000487674 SLC41A1Q8IVJ1 513 aa8.96□□□□□ -0.98
PRKCB-208ENST00000487674 ARHGAP18Q8N392 663 aa8.96□□□□□ -0.98
PRKCB-208ENST00000487674 MINDY1Q8N5J2 469 aa8.96□□□□□ -0.98
PRKCB-208ENST00000487674 DEFB119Q8N690 84 aa8.96□□□□□ -0.98
PRKCB-208ENST00000487674 TRIML1Q8N9V2 468 aa8.96□□□□□ -0.98
PRKCB-208ENST00000487674 KDF1Q8NAX2 398 aaPredicted RBP8.96□□□□□ -0.98
PRKCB-208ENST00000487674 FBXL13Q8NEE6 735 aa8.96□□□□□ -0.98
PRKCB-208ENST00000487674 GATA6Q92908 595 aa8.96□□□□□ -0.98
PRKCB-208ENST00000487674 FOXJ1Q92949 421 aa8.96□□□□□ -0.98
PRKCB-208ENST00000487674 P2RY11Q96G91 374 aa8.96□□□□□ -0.98
PRKCB-208ENST00000487674 SCNM1Q9BWG6 230 aa8.96□□□□□ -0.98
PRKCB-208ENST00000487674 GTPBP2Q9BX10 602 aaKnown RBP8.96□□□□□ -0.98
PRKCB-208ENST00000487674 DCLK3Q9C098 648 aa8.96□□□□□ -0.98
PRKCB-208ENST00000487674 MMRN2Q9H8L6 949 aa8.96□□□□□ -0.98
PRKCB-208ENST00000487674 FSCN3Q9NQT6 498 aa8.96□□□□□ -0.98
PRKCB-208ENST00000487674 DNAAF2Q9NVR5 837 aaKnown RBP8.96□□□□□ -0.98
PRKCB-208ENST00000487674 PLK2Q9NYY3 685 aa8.96□□□□□ -0.98
PRKCB-208ENST00000487674 SUSD2Q9UGT4 822 aa8.96□□□□□ -0.98
PRKCB-208ENST00000487674 RASAL2Q9UJF2 1139 aa8.96□□□□□ -0.98
PRKCB-208ENST00000487674 FBXO10Q9UK96 956 aa8.96□□□□□ -0.98
PRKCB-208ENST00000487674 MAPK8IP1Q9UQF2 711 aa8.96□□□□□ -0.98
PRKCB-208ENST00000487674 NEUROG3Q9Y4Z2 214 aa8.96□□□□□ -0.98
PRKCB-208ENST00000487674 STON1Q9Y6Q2 735 aa8.96□□□□□ -0.98
PRKCB-208ENST00000487674 CFAP47Q6ZTR5 3102 aa8.96□□□□□ -0.98
PRKCB-208ENST00000487674 MUC22E2RYF6 1773 aaPredicted RBP8.95□□□□□ -0.98
PRKCB-208ENST00000487674 A0A1W2PQ27 194 aa8.95□□□□□ -0.98
PRKCB-208ENST00000487674 A0A1W2PQ64 194 aa8.95□□□□□ -0.98
PRKCB-208ENST00000487674 STX10O60499 249 aa8.95□□□□□ -0.98
PRKCB-208ENST00000487674 TOP3BO95985 862 aaKnown RBP8.95□□□□□ -0.98
PRKCB-208ENST00000487674 CD6P30203 668 aa8.95□□□□□ -0.98
PRKCB-208ENST00000487674 CORO1AP31146 461 aaKnown RBP8.95□□□□□ -0.98
PRKCB-208ENST00000487674 RAD23BP54727 409 aa8.95□□□□□ -0.98
PRKCB-208ENST00000487674 SLC8A3P57103 927 aa8.95□□□□□ -0.98
PRKCB-208ENST00000487674 SIM1P81133 766 aaPredicted RBP8.95□□□□□ -0.98
PRKCB-208ENST00000487674 EFEMP1Q12805 493 aa8.95□□□□□ -0.98
PRKCB-208ENST00000487674 ADAM9Q13443 819 aa8.95□□□□□ -0.98
PRKCB-208ENST00000487674 ENPP2Q13822 863 aa8.95□□□□□ -0.98
PRKCB-208ENST00000487674 HNRNPDQ14103 355 aaKnown RBP8.95□□□□□ -0.98
PRKCB-208ENST00000487674 EIF4HQ15056 248 aaKnown RBP8.95□□□□□ -0.98
PRKCB-208ENST00000487674 E2F5Q15329 346 aa8.95□□□□□ -0.98
PRKCB-208ENST00000487674 FUT11Q495W5 492 aa8.95□□□□□ -0.98
PRKCB-208ENST00000487674 ZNF394Q53GI3 561 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms