RNA–Protein interactions for RNA: ENST00000473565.5

CLK1-210, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 3,208 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-210ENST00000473565 USP29Q9HBJ7 922 aa6.46□□□□□ -1.38
CLK1-210ENST00000473565 PRDM5Q9NQX1 630 aaPredicted RBP6.46□□□□□ -1.38
CLK1-210ENST00000473565 DTLQ9NZJ0 730 aa6.46□□□□□ -1.38
CLK1-210ENST00000473565 USP3Q9Y6I4 520 aa6.46□□□□□ -1.38
CLK1-210ENST00000473565 SHROOM3Q8TF72 1996 aa6.46□□□□□ -1.38
CLK1-210ENST00000473565 GOLGA6L10A6NI86 522 aa6.46□□□□□ -1.38
CLK1-210ENST00000473565 AVILO75366 819 aa6.46□□□□□ -1.38
CLK1-210ENST00000473565 FBXO21O94952 628 aa6.46□□□□□ -1.38
CLK1-210ENST00000473565 GALTP07902 379 aa6.46□□□□□ -1.38
CLK1-210ENST00000473565 ADRA1BP35368 520 aa6.46□□□□□ -1.38
CLK1-210ENST00000473565 MAGEA4P43358 317 aa6.46□□□□□ -1.38
CLK1-210ENST00000473565 MAGOHP61326 146 aaKnown RBP6.46□□□□□ -1.38
CLK1-210ENST00000473565 SLMAPQ14BN4 828 aa6.46□□□□□ -1.38
CLK1-210ENST00000473565 FNBP1LQ5T0N5 605 aa6.46□□□□□ -1.38
CLK1-210ENST00000473565 FUT10Q6P4F1 479 aa6.46□□□□□ -1.38
CLK1-210ENST00000473565 KCNT2Q6UVM3 1135 aa6.46□□□□□ -1.38
CLK1-210ENST00000473565 BNIPLQ7Z465 357 aa6.46□□□□□ -1.38
CLK1-210ENST00000473565 SCD5Q86SK9 330 aa6.46□□□□□ -1.38
CLK1-210ENST00000473565 NPAS4Q8IUM7 802 aa6.46□□□□□ -1.38
CLK1-210ENST00000473565 CRIPAKQ8N1N5 446 aa6.46□□□□□ -1.38
CLK1-210ENST00000473565 ZCCHC9Q8N567 271 aaKnown RBP6.46□□□□□ -1.38
CLK1-210ENST00000473565 DEPDC1BQ8WUY9 529 aa6.46□□□□□ -1.38
CLK1-210ENST00000473565 FAF2Q96CS3 445 aa6.46□□□□□ -1.38
CLK1-210ENST00000473565 PAWRQ96IZ0 340 aaKnown RBP6.46□□□□□ -1.38
CLK1-210ENST00000473565 SIK2Q9H0K1 926 aa6.46□□□□□ -1.38
CLK1-210ENST00000473565 ZCWPW1Q9H0M4 648 aa6.46□□□□□ -1.38
CLK1-210ENST00000473565 OSER1Q9NX31 292 aa6.46□□□□□ -1.38
CLK1-210ENST00000473565 WBP1LQ9NX94 342 aa6.46□□□□□ -1.38
CLK1-210ENST00000473565 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.46□□□□□ -1.38
CLK1-210ENST00000473565 KANSL3Q9P2N6 904 aa6.46□□□□□ -1.38
CLK1-210ENST00000473565 XPO7Q9UIA9 1087 aaKnown RBP6.46□□□□□ -1.38
CLK1-210ENST00000473565 A0A1W2PQH9 124 aa6.45□□□□□ -1.38
CLK1-210ENST00000473565 TNFRSF10BO14763 440 aa6.45□□□□□ -1.38
CLK1-210ENST00000473565 OAZ2O95190 189 aa6.45□□□□□ -1.38
CLK1-210ENST00000473565 ALDH2P05091 517 aa6.45□□□□□ -1.38
CLK1-210ENST00000473565 NUDT17P0C025 328 aa6.45□□□□□ -1.38
CLK1-210ENST00000473565 CPB1P15086 417 aa6.45□□□□□ -1.38
CLK1-210ENST00000473565 VAV1P15498 845 aa6.45□□□□□ -1.38
CLK1-210ENST00000473565 ARL4AP40617 200 aa6.45□□□□□ -1.38
CLK1-210ENST00000473565 NUMBP49757 651 aa6.45□□□□□ -1.38
CLK1-210ENST00000473565 GUCY1A3Q02108 690 aa6.45□□□□□ -1.38
CLK1-210ENST00000473565 PDIA2Q13087 525 aaKnown RBP6.45□□□□□ -1.38
CLK1-210ENST00000473565 ZNF771Q7L3S4 317 aaPredicted RBP6.45□□□□□ -1.38
CLK1-210ENST00000473565 ZBED8Q8IZ13 594 aa6.45□□□□□ -1.38
CLK1-210ENST00000473565 CASP10Q92851 521 aa6.45□□□□□ -1.38
CLK1-210ENST00000473565 RNF34Q969K3 372 aa6.45□□□□□ -1.38
CLK1-210ENST00000473565 SEPT5Q99719 369 aaPredicted RBP6.45□□□□□ -1.38
CLK1-210ENST00000473565 WDR83Q9BRX9 315 aaKnown RBP6.45□□□□□ -1.38
CLK1-210ENST00000473565 COLEC11Q9BWP8 271 aa6.45□□□□□ -1.38
CLK1-210ENST00000473565 TKTL2Q9H0I9 626 aa6.45□□□□□ -1.38
CLK1-210ENST00000473565 RAB6BQ9NRW1 208 aa6.45□□□□□ -1.38
CLK1-210ENST00000473565 TMEM39AQ9NV64 488 aa6.45□□□□□ -1.38
CLK1-210ENST00000473565 TBK1Q9UHD2 729 aa6.45□□□□□ -1.38
CLK1-210ENST00000473565 FARP1Q9Y4F1 1045 aaPredicted RBP6.45□□□□□ -1.38
CLK1-210ENST00000473565 EEF2KO00418 725 aaKnown RBP6.45□□□□□ -1.38
CLK1-210ENST00000473565 CSPG5O95196 566 aa6.45□□□□□ -1.38
CLK1-210ENST00000473565 VNN2O95498 520 aa6.45□□□□□ -1.38
CLK1-210ENST00000473565 TTC4O95801 387 aa6.45□□□□□ -1.38
CLK1-210ENST00000473565 TBX18O95935 607 aa6.45□□□□□ -1.38
CLK1-210ENST00000473565 MOCS2O96007 188 aaPredicted RBP6.45□□□□□ -1.38
CLK1-210ENST00000473565 ACRP10323 421 aa6.45□□□□□ -1.38
CLK1-210ENST00000473565 NR1D1P20393 614 aa6.45□□□□□ -1.38
CLK1-210ENST00000473565 TGM2P21980 687 aa6.45□□□□□ -1.38
CLK1-210ENST00000473565 YWHAGP61981 247 aaKnown RBP eCLIP6.45□□□□□ -1.38
CLK1-210ENST00000473565 DEFB103AP81534 67 aa6.45□□□□□ -1.38
CLK1-210ENST00000473565 LRRC26Q2I0M4 334 aa6.45□□□□□ -1.38
CLK1-210ENST00000473565 EFHC2Q5JST6 749 aa6.45□□□□□ -1.38
CLK1-210ENST00000473565 PM20D1Q6GTS8 502 aa6.45□□□□□ -1.38
CLK1-210ENST00000473565 RNF19BQ6ZMZ0 732 aa6.45□□□□□ -1.38
CLK1-210ENST00000473565 C4orf50Q6ZRC1 276 aa6.45□□□□□ -1.38
CLK1-210ENST00000473565 ANKRD33Q7Z3H0 272 aa6.45□□□□□ -1.38
CLK1-210ENST00000473565 NPWQ8N729 165 aa6.45□□□□□ -1.38
CLK1-210ENST00000473565 VN1R3Q9BXE9 311 aa6.45□□□□□ -1.38
CLK1-210ENST00000473565 ELAC1Q9H777 363 aaKnown RBP6.45□□□□□ -1.38
CLK1-210ENST00000473565 PIH1D1Q9NWS0 290 aaKnown RBP6.45□□□□□ -1.38
CLK1-210ENST00000473565 SEPT10Q9P0V9 454 aa6.45□□□□□ -1.38
CLK1-210ENST00000473565 PATJQ8NI35 1801 aa6.45□□□□□ -1.38
CLK1-210ENST00000473565 BPTFQ12830 3046 aa6.45□□□□□ -1.38
CLK1-210ENST00000473565 MYO7AQ13402 2215 aa6.45□□□□□ -1.38
CLK1-210ENST00000473565 CHD9Q3L8U1 2897 aa6.45□□□□□ -1.38
CLK1-210ENST00000473565 TMEM189-UBE2V1I3L0A0 370 aa6.44□□□□□ -1.38
CLK1-210ENST00000473565 TRAPPC3O43617 180 aa6.44□□□□□ -1.38
CLK1-210ENST00000473565 METTL18O95568 372 aa6.44□□□□□ -1.38
CLK1-210ENST00000473565 SRGAP2BP0DMP2 458 aa6.44□□□□□ -1.38
CLK1-210ENST00000473565 CREB1P16220 341 aa6.44□□□□□ -1.38
CLK1-210ENST00000473565 CAPN2P17655 700 aa6.44□□□□□ -1.38
CLK1-210ENST00000473565 MAPRE1Q15691 268 aaKnown RBP6.44□□□□□ -1.38
CLK1-210ENST00000473565 BBS9Q3SYG4 887 aa6.44□□□□□ -1.38
CLK1-210ENST00000473565 MGAT5BQ3V5L5 792 aa6.44□□□□□ -1.38
CLK1-210ENST00000473565 BTBD8Q5XKL5 378 aa6.44□□□□□ -1.38
CLK1-210ENST00000473565 RFX8Q6ZV50 586 aa6.44□□□□□ -1.38
CLK1-210ENST00000473565 IGDCC3Q8IVU1 814 aa6.44□□□□□ -1.38
CLK1-210ENST00000473565 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.44□□□□□ -1.38
CLK1-210ENST00000473565 NAT8LQ8N9F0 302 aa6.44□□□□□ -1.38
CLK1-210ENST00000473565 MDM1Q8TC05 714 aa6.44□□□□□ -1.38
CLK1-210ENST00000473565 GIPC2Q8TF65 315 aa6.44□□□□□ -1.38
CLK1-210ENST00000473565 EXOC4Q96A65 974 aa6.44□□□□□ -1.38
CLK1-210ENST00000473565 CELF6Q96J87 481 aaKnown RBP6.44□□□□□ -1.38
CLK1-210ENST00000473565 ZNF333Q96JL9 665 aa6.44□□□□□ -1.38
CLK1-210ENST00000473565 TRIM56Q9BRZ2 755 aaKnown RBP6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms