RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 SLC35C1Q96A29 364 aa13.9□□□□□ -0.18
CPSF4-210ENST00000469897 ZNF419Q96HQ0 510 aaPredicted RBP13.9□□□□□ -0.18
CPSF4-210ENST00000469897 PIWIL1Q96J94 861 aaKnown RBP13.9□□□□□ -0.18
CPSF4-210ENST00000469897 FAM124BQ9H5Z6 455 aaPredicted RBP13.9□□□□□ -0.18
CPSF4-210ENST00000469897 PRDM16Q9HAZ2 1276 aa13.9□□□□□ -0.18
CPSF4-210ENST00000469897 ELOVL2Q9NXB9 296 aa13.9□□□□□ -0.18
CPSF4-210ENST00000469897 THAP10Q9P2Z0 257 aaPredicted RBP13.9□□□□□ -0.18
CPSF4-210ENST00000469897 ZNF638Q14966 1978 aaKnown RBP13.9□□□□□ -0.18
CPSF4-210ENST00000469897 SDK1Q7Z5N4 2213 aa13.9□□□□□ -0.18
CPSF4-210ENST00000469897 RNF225M0QZC1 329 aaPredicted RBP13.89□□□□□ -0.19
CPSF4-210ENST00000469897 VDRP11473 427 aa13.89□□□□□ -0.19
CPSF4-210ENST00000469897 LCP1P13796 627 aa13.89□□□□□ -0.19
CPSF4-210ENST00000469897 MAOBP27338 520 aa13.89□□□□□ -0.19
CPSF4-210ENST00000469897 LRRC63Q05C16 580 aa13.89□□□□□ -0.19
CPSF4-210ENST00000469897 ADIGQ0VDE8 80 aa13.89□□□□□ -0.19
CPSF4-210ENST00000469897 BST2Q10589 180 aaKnown RBP13.89□□□□□ -0.19
CPSF4-210ENST00000469897 STARD3Q14849 445 aa13.89□□□□□ -0.19
CPSF4-210ENST00000469897 TRIP4Q15650 581 aaPredicted RBP13.89□□□□□ -0.19
CPSF4-210ENST00000469897 FMNL3Q8IVF7 1028 aa13.89□□□□□ -0.19
CPSF4-210ENST00000469897 CPXM2Q8N436 756 aa13.89□□□□□ -0.19
CPSF4-210ENST00000469897 OR2I1PQ8NGU4 316 aa13.89□□□□□ -0.19
CPSF4-210ENST00000469897 UCMAQ8WVF2 138 aa13.89□□□□□ -0.19
CPSF4-210ENST00000469897 SORCS1Q8WY21 1168 aa13.89□□□□□ -0.19
CPSF4-210ENST00000469897 TFAP2BQ92481 460 aa13.89□□□□□ -0.19
CPSF4-210ENST00000469897 PLD4Q96BZ4 506 aa13.89□□□□□ -0.19
CPSF4-210ENST00000469897 HSPA12BQ96MM6 686 aa13.89□□□□□ -0.19
CPSF4-210ENST00000469897 IPO9Q96P70 1041 aaKnown RBP13.89□□□□□ -0.19
CPSF4-210ENST00000469897 CIPCQ9C0C6 399 aa13.89□□□□□ -0.19
CPSF4-210ENST00000469897 MKRN2Q9H000 416 aaKnown RBP13.89□□□□□ -0.19
CPSF4-210ENST00000469897 SLC32A1Q9H598 525 aa13.89□□□□□ -0.19
CPSF4-210ENST00000469897 ITM2CQ9NQX7 267 aa13.89□□□□□ -0.19
CPSF4-210ENST00000469897 KIAA1257Q9ULG3 409 aa13.89□□□□□ -0.19
CPSF4-210ENST00000469897 PTPRDP23468 1912 aa13.89□□□□□ -0.19
CPSF4-210ENST00000469897 O00370 1275 aa13.88□□□□□ -0.19
CPSF4-210ENST00000469897 PIK3R2O00459 728 aa13.88□□□□□ -0.19
CPSF4-210ENST00000469897 ARHGAP33O14559 1287 aa13.88□□□□□ -0.19
CPSF4-210ENST00000469897 SYNCRIPO60506 623 aaKnown RBP13.88□□□□□ -0.19
CPSF4-210ENST00000469897 GABBR2O75899 941 aa13.88□□□□□ -0.19
CPSF4-210ENST00000469897 CALCAP01258 141 aa13.88□□□□□ -0.19
CPSF4-210ENST00000469897 CD44P16070 742 aaKnown RBP13.88□□□□□ -0.19
CPSF4-210ENST00000469897 CD6P30203 668 aa13.88□□□□□ -0.19
CPSF4-210ENST00000469897 HOXD12P35452 270 aa13.88□□□□□ -0.19
CPSF4-210ENST00000469897 FMO5P49326 533 aa13.88□□□□□ -0.19
CPSF4-210ENST00000469897 HARS2P49590 506 aaKnown RBP13.88□□□□□ -0.19
CPSF4-210ENST00000469897 RGS7P49802 495 aa13.88□□□□□ -0.19
CPSF4-210ENST00000469897 BCAT1P54687 386 aa13.88□□□□□ -0.19
CPSF4-210ENST00000469897 YWHAEP62258 255 aaKnown RBP13.88□□□□□ -0.19
CPSF4-210ENST00000469897 SEMA3BQ13214 749 aa13.88□□□□□ -0.19
CPSF4-210ENST00000469897 ENPP2Q13822 863 aa13.88□□□□□ -0.19
CPSF4-210ENST00000469897 MPPE1Q53F39 396 aa13.88□□□□□ -0.19
CPSF4-210ENST00000469897 TMEM215Q68D42 235 aa13.88□□□□□ -0.19
CPSF4-210ENST00000469897 TMEM270Q6UE05 265 aa13.88□□□□□ -0.19
CPSF4-210ENST00000469897 METTL3Q86U44 580 aaKnown RBP13.88□□□□□ -0.19
CPSF4-210ENST00000469897 TMPRSS6Q8IU80 811 aa13.88□□□□□ -0.19
CPSF4-210ENST00000469897 SIX6OS1Q8N1H7 587 aa13.88□□□□□ -0.19
CPSF4-210ENST00000469897 UBR7Q8N806 425 aa13.88□□□□□ -0.19
CPSF4-210ENST00000469897 KCTD13Q8WZ19 329 aa13.88□□□□□ -0.19
CPSF4-210ENST00000469897 KAT5Q92993 513 aa13.88□□□□□ -0.19
CPSF4-210ENST00000469897 TMA16Q96EY4 203 aaKnown RBP13.88□□□□□ -0.19
CPSF4-210ENST00000469897 TOE1Q96GM8 510 aaKnown RBP13.88□□□□□ -0.19
CPSF4-210ENST00000469897 DHTKD1Q96HY7 919 aaPredicted RBP13.88□□□□□ -0.19
CPSF4-210ENST00000469897 TIGD1Q96MW7 591 aa13.88□□□□□ -0.19
CPSF4-210ENST00000469897 SLC2A11Q9BYW1 496 aa13.88□□□□□ -0.19
CPSF4-210ENST00000469897 CAPN10Q9HC96 672 aa13.88□□□□□ -0.19
CPSF4-210ENST00000469897 METTL14Q9HCE5 456 aaKnown RBP13.88□□□□□ -0.19
CPSF4-210ENST00000469897 OLA1Q9NTK5 396 aaKnown RBP13.88□□□□□ -0.19
CPSF4-210ENST00000469897 PCDHB4Q9Y5E5 795 aa13.88□□□□□ -0.19
CPSF4-210ENST00000469897 SPTBN2O15020 2390 aa13.87□□□□□ -0.19
CPSF4-210ENST00000469897 C1QTNF9BB2RNN3 333 aa13.87□□□□□ -0.19
CPSF4-210ENST00000469897 KCNJ18B7U540 433 aa13.87□□□□□ -0.19
CPSF4-210ENST00000469897 NPC1O15118 1278 aa13.87□□□□□ -0.19
CPSF4-210ENST00000469897 TIMM44O43615 452 aa13.87□□□□□ -0.19
CPSF4-210ENST00000469897 C1QTNF9P0C862 333 aa13.87□□□□□ -0.19
CPSF4-210ENST00000469897 TBXAS1P24557 533 aaPredicted RBP13.87□□□□□ -0.19
CPSF4-210ENST00000469897 ZNF132P52740 706 aa13.87□□□□□ -0.19
CPSF4-210ENST00000469897 ARID5AQ03989 594 aa13.87□□□□□ -0.19
CPSF4-210ENST00000469897 STIM1Q13586 685 aa13.87□□□□□ -0.19
CPSF4-210ENST00000469897 ZNF234Q14588 700 aa13.87□□□□□ -0.19
CPSF4-210ENST00000469897 CNGA2Q16280 664 aa13.87□□□□□ -0.19
CPSF4-210ENST00000469897 PKDCCQ504Y2 493 aa13.87□□□□□ -0.19
CPSF4-210ENST00000469897 SYCP2LQ5T4T6 812 aa13.87□□□□□ -0.19
CPSF4-210ENST00000469897 PMF1Q6P1K2 205 aa13.87□□□□□ -0.19
CPSF4-210ENST00000469897 LCLAT1Q6UWP7 414 aa13.87□□□□□ -0.19
CPSF4-210ENST00000469897 RRAGAQ7L523 313 aa13.87□□□□□ -0.19
CPSF4-210ENST00000469897 ANKS1BQ7Z6G8 1248 aa13.87□□□□□ -0.19
CPSF4-210ENST00000469897 PIP4P1Q86T03 277 aa13.87□□□□□ -0.19
CPSF4-210ENST00000469897 FAM217AQ8IXS0 508 aa13.87□□□□□ -0.19
CPSF4-210ENST00000469897 HDDC3Q8N4P3 179 aa13.87□□□□□ -0.19
CPSF4-210ENST00000469897 RBBP8NLQ8NC74 664 aaPredicted RBP13.87□□□□□ -0.19
CPSF4-210ENST00000469897 FOXJ1Q92949 421 aa13.87□□□□□ -0.19
CPSF4-210ENST00000469897 SIPA1Q96FS4 1042 aa13.87□□□□□ -0.19
CPSF4-210ENST00000469897 ZSWIM1Q9BR11 485 aa13.87□□□□□ -0.19
CPSF4-210ENST00000469897 GPR174Q9BXC1 333 aa13.87□□□□□ -0.19
CPSF4-210ENST00000469897 GTPBP4Q9BZE4 634 aaKnown RBP13.87□□□□□ -0.19
CPSF4-210ENST00000469897 ABCC13Q9NSE7 274 aa13.87□□□□□ -0.19
CPSF4-210ENST00000469897 WSB2Q9NYS7 404 aaPredicted RBP13.87□□□□□ -0.19
CPSF4-210ENST00000469897 HOOK1Q9UJC3 728 aaKnown RBP13.87□□□□□ -0.19
CPSF4-210ENST00000469897 MAN1B1Q9UKM7 699 aa13.87□□□□□ -0.19
CPSF4-210ENST00000469897 WASF3Q9UPY6 502 aa13.87□□□□□ -0.19
CPSF4-210ENST00000469897 HBS1LQ9Y450 684 aaKnown RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms