RNA–Protein interactions for RNA: ENST00000469717.5

TPM3-215, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 4,041 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-215ENST00000469717 TEKT3Q9BXF9 490 aa8.2□□□□□ -1.1
TPM3-215ENST00000469717 MRPS26Q9BYN8 205 aaKnown RBP8.2□□□□□ -1.1
TPM3-215ENST00000469717 CAAP1Q9H8G2 361 aa8.2□□□□□ -1.1
TPM3-215ENST00000469717 RAB6BQ9NRW1 208 aa8.2□□□□□ -1.1
TPM3-215ENST00000469717 PARVAQ9NVD7 372 aa8.2□□□□□ -1.1
TPM3-215ENST00000469717 FAIMQ9NVQ4 179 aa8.2□□□□□ -1.1
TPM3-215ENST00000469717 SELENONQ9NZV5 590 aa8.2□□□□□ -1.1
TPM3-215ENST00000469717 NDUFA13Q9P0J0 144 aa8.2□□□□□ -1.1
TPM3-215ENST00000469717 IP6K2Q9UHH9 426 aa8.2□□□□□ -1.1
TPM3-215ENST00000469717 CSADQ9Y600 493 aa8.2□□□□□ -1.1
TPM3-215ENST00000469717 C7orf72A4D263 438 aa8.2□□□□□ -1.1
TPM3-215ENST00000469717 DENRO43583 198 aaKnown RBP8.2□□□□□ -1.1
TPM3-215ENST00000469717 ADAM23O75077 832 aa8.2□□□□□ -1.1
TPM3-215ENST00000469717 DDNO94850 711 aaPredicted RBP8.2□□□□□ -1.1
TPM3-215ENST00000469717 TNFAIP8O95379 198 aa8.2□□□□□ -1.1
TPM3-215ENST00000469717 NUDT2P50583 147 aa8.2□□□□□ -1.1
TPM3-215ENST00000469717 YWHAZP63104 245 aaKnown RBP8.2□□□□□ -1.1
TPM3-215ENST00000469717 IGBP1P78318 339 aa8.2□□□□□ -1.1
TPM3-215ENST00000469717 GCNT1Q02742 428 aa8.2□□□□□ -1.1
TPM3-215ENST00000469717 PPM1JQ5JR12 505 aa8.2□□□□□ -1.1
TPM3-215ENST00000469717 FAM219BQ5XKK7 198 aa8.2□□□□□ -1.1
TPM3-215ENST00000469717 DNAJC24Q6P3W2 148 aa8.2□□□□□ -1.1
TPM3-215ENST00000469717 LPCAT2Q7L5N7 544 aa8.2□□□□□ -1.1
TPM3-215ENST00000469717 PATL1Q86TB9 770 aaKnown RBP8.2□□□□□ -1.1
TPM3-215ENST00000469717 RFX6Q8HWS3 928 aa8.2□□□□□ -1.1
TPM3-215ENST00000469717 SPATA18Q8TC71 538 aa8.2□□□□□ -1.1
TPM3-215ENST00000469717 CCT7Q99832 543 aa8.2□□□□□ -1.1
TPM3-215ENST00000469717 C17orf75Q9HAS0 396 aa8.2□□□□□ -1.1
TPM3-215ENST00000469717 TIMMDC1Q9NPL8 285 aa8.2□□□□□ -1.1
TPM3-215ENST00000469717 FETUBQ9UGM5 382 aa8.2□□□□□ -1.1
TPM3-215ENST00000469717 ZC3H7BQ9UGR2 993 aaKnown RBP8.2□□□□□ -1.1
TPM3-215ENST00000469717 EMCNQ9ULC0 261 aa8.2□□□□□ -1.1
TPM3-215ENST00000469717 FOCADQ5VW36 1801 aa8.19□□□□□ -1.1
TPM3-215ENST00000469717 NOP56O00567 594 aaKnown RBP8.19□□□□□ -1.1
TPM3-215ENST00000469717 NEMP1O14524 444 aa8.19□□□□□ -1.1
TPM3-215ENST00000469717 VIL1P09327 827 aaKnown RBP8.19□□□□□ -1.1
TPM3-215ENST00000469717 FAM58BPP0C7Q3 252 aa8.19□□□□□ -1.1
TPM3-215ENST00000469717 FGF3P11487 239 aaPredicted RBP8.19□□□□□ -1.1
TPM3-215ENST00000469717 IL1R1P14778 569 aa8.19□□□□□ -1.1
TPM3-215ENST00000469717 YWHABP31946 246 aaKnown RBP8.19□□□□□ -1.1
TPM3-215ENST00000469717 L1CAMP32004 1257 aa8.19□□□□□ -1.1
TPM3-215ENST00000469717 SLC1A6P48664 564 aa8.19□□□□□ -1.1
TPM3-215ENST00000469717 PGGT1BP53609 377 aa8.19□□□□□ -1.1
TPM3-215ENST00000469717 SLC5A3P53794 718 aa8.19□□□□□ -1.1
TPM3-215ENST00000469717 OXCT1P55809 520 aa8.19□□□□□ -1.1
TPM3-215ENST00000469717 NLRP11P59045 1033 aaKnown RBP8.19□□□□□ -1.1
TPM3-215ENST00000469717 SH3PXD2AQ5TCZ1 1133 aa8.19□□□□□ -1.1
TPM3-215ENST00000469717 SH3BP5LQ7L8J4 393 aa8.19□□□□□ -1.1
TPM3-215ENST00000469717 C12orf56Q8IXR9 622 aa8.19□□□□□ -1.1
TPM3-215ENST00000469717 ZNF606Q8WXB4 792 aa8.19□□□□□ -1.1
TPM3-215ENST00000469717 FAF2Q96CS3 445 aa8.19□□□□□ -1.1
TPM3-215ENST00000469717 ZBTB45Q96K62 511 aaPredicted RBP8.19□□□□□ -1.1
TPM3-215ENST00000469717 LRGUKQ96M69 825 aa8.19□□□□□ -1.1
TPM3-215ENST00000469717 KLHL32Q96NJ5 620 aa8.19□□□□□ -1.1
TPM3-215ENST00000469717 LENG8Q96PV6 779 aaPredicted RBP8.19□□□□□ -1.1
TPM3-215ENST00000469717 CORO1BQ9BR76 489 aa8.19□□□□□ -1.1
TPM3-215ENST00000469717 PPCSQ9HAB8 311 aa8.19□□□□□ -1.1
TPM3-215ENST00000469717 KCNH7Q9NS40 1196 aa8.19□□□□□ -1.1
TPM3-215ENST00000469717 FBXO28Q9NVF7 368 aa8.19□□□□□ -1.1
TPM3-215ENST00000469717 RRN3Q9NYV6 651 aa8.19□□□□□ -1.1
TPM3-215ENST00000469717 RIMS3Q9UJD0 308 aa8.19□□□□□ -1.1
TPM3-215ENST00000469717 CENPFP49454 3210 aa8.19□□□□□ -1.1
TPM3-215ENST00000469717 ZNF541Q9H0D2 1346 aa8.19□□□□□ -1.1
TPM3-215ENST00000469717 SPDYE2BA6NHP3 402 aa8.19□□□□□ -1.1
TPM3-215ENST00000469717 P4HBP07237 508 aaKnown RBP8.19□□□□□ -1.1
TPM3-215ENST00000469717 APRTP07741 180 aa8.19□□□□□ -1.1
TPM3-215ENST00000469717 SPDYE6P0CI01 402 aa8.19□□□□□ -1.1
TPM3-215ENST00000469717 MYCLP12524 364 aaPredicted RBP8.19□□□□□ -1.1
TPM3-215ENST00000469717 MMP8P22894 467 aa8.19□□□□□ -1.1
TPM3-215ENST00000469717 TCF7P36402 384 aaPredicted RBP8.19□□□□□ -1.1
TPM3-215ENST00000469717 DPP6P42658 865 aa8.19□□□□□ -1.1
TPM3-215ENST00000469717 CCR10P46092 362 aa8.19□□□□□ -1.1
TPM3-215ENST00000469717 MTTPP55157 894 aa8.19□□□□□ -1.1
TPM3-215ENST00000469717 WASHC5Q12768 1159 aa8.19□□□□□ -1.1
TPM3-215ENST00000469717 PPP2R5DQ14738 602 aa8.19□□□□□ -1.1
TPM3-215ENST00000469717 SPDYE2Q495Y8 402 aa8.19□□□□□ -1.1
TPM3-215ENST00000469717 SLC9B1Q4ZJI4 515 aa8.19□□□□□ -1.1
TPM3-215ENST00000469717 XKR9Q5GH70 373 aa8.19□□□□□ -1.1
TPM3-215ENST00000469717 MBLAC2Q68D91 279 aa8.19□□□□□ -1.1
TPM3-215ENST00000469717 XKR5Q6UX68 686 aa8.19□□□□□ -1.1
TPM3-215ENST00000469717 C10orf107Q8IVU9 208 aa8.19□□□□□ -1.1
TPM3-215ENST00000469717 WDR75Q8IWA0 830 aaKnown RBP8.19□□□□□ -1.1
TPM3-215ENST00000469717 BBS5Q8N3I7 341 aa8.19□□□□□ -1.1
TPM3-215ENST00000469717 TRIML2Q8N7C3 387 aa8.19□□□□□ -1.1
TPM3-215ENST00000469717 NLGN2Q8NFZ4 835 aa8.19□□□□□ -1.1
TPM3-215ENST00000469717 DCAF4Q8WV16 495 aa8.19□□□□□ -1.1
TPM3-215ENST00000469717 SORT1Q99523 831 aa8.19□□□□□ -1.1
TPM3-215ENST00000469717 WDR55Q9H6Y2 383 aaPredicted RBP8.19□□□□□ -1.1
TPM3-215ENST00000469717 SLC9A2Q9UBY0 812 aa8.19□□□□□ -1.1
TPM3-215ENST00000469717 RSL24D1Q9UHA3 163 aaKnown RBP8.19□□□□□ -1.1
TPM3-215ENST00000469717 CDC14AQ9UNH5 594 aa8.19□□□□□ -1.1
TPM3-215ENST00000469717 PSMD13Q9UNM6 376 aa8.19□□□□□ -1.1
TPM3-215ENST00000469717 BTBD19C9JJ37 291 aa8.19□□□□□ -1.1
TPM3-215ENST00000469717 LRCH4O75427 683 aa8.19□□□□□ -1.1
TPM3-215ENST00000469717 KRT37O76014 449 aa8.19□□□□□ -1.1
TPM3-215ENST00000469717 IL1BP01584 269 aa8.19□□□□□ -1.1
TPM3-215ENST00000469717 KPNA1P52294 538 aaPredicted RBP8.19□□□□□ -1.1
TPM3-215ENST00000469717 PFKPQ01813 784 aa8.19□□□□□ -1.1
TPM3-215ENST00000469717 ATP1A4Q13733 1029 aa8.19□□□□□ -1.1
TPM3-215ENST00000469717 PDE1CQ14123 709 aaPredicted RBP8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms