RNA–Protein interactions for RNA: ENST00000414786.6

SHANK3-202, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

TSL 5

Gene SHANK3, Length 7,394 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-202ENST00000414786 PLEKHA7Q6IQ23 1121 aa18.95■□□□□ 0.62
SHANK3-202ENST00000414786 CES5AQ6NT32 575 aa18.95■□□□□ 0.62
SHANK3-202ENST00000414786 CHPFQ8IZ52 775 aa18.95■□□□□ 0.62
SHANK3-202ENST00000414786 CORO1BQ9BR76 489 aa18.95■□□□□ 0.62
SHANK3-202ENST00000414786 BPIFA1Q9NP55 256 aa18.95■□□□□ 0.62
SHANK3-202ENST00000414786 TMA7Q9Y2S6 64 aaKnown RBP18.95■□□□□ 0.62
SHANK3-202ENST00000414786 GSG1L2A8MUP6 293 aa18.94■□□□□ 0.62
SHANK3-202ENST00000414786 STILQ15468 1287 aa18.94■□□□□ 0.62
SHANK3-202ENST00000414786 EMC1Q8N766 993 aa18.94■□□□□ 0.62
SHANK3-202ENST00000414786 PDCD10Q9BUL8 212 aa18.94■□□□□ 0.62
SHANK3-202ENST00000414786 CNPPD1Q9BV87 410 aa18.94■□□□□ 0.62
SHANK3-202ENST00000414786 CNOT3O75175 753 aaKnown RBP18.94■□□□□ 0.62
SHANK3-202ENST00000414786 RPL4P36578 427 aaKnown RBP18.94■□□□□ 0.62
SHANK3-202ENST00000414786 CDC73Q6P1J9 531 aa18.94■□□□□ 0.62
SHANK3-202ENST00000414786 KCNH7Q9NS40 1196 aa18.94■□□□□ 0.62
SHANK3-202ENST00000414786 WDR35Q9P2L0 1181 aa18.94■□□□□ 0.62
SHANK3-202ENST00000414786 SUZ12Q15022 739 aaKnown RBP18.94■□□□□ 0.62
SHANK3-202ENST00000414786 DNAL1Q4LDG9 190 aa18.94■□□□□ 0.62
SHANK3-202ENST00000414786 ILKAPQ9H0C8 392 aaPredicted RBP18.94■□□□□ 0.62
SHANK3-202ENST00000414786 RSAD1Q9HA92 442 aa18.94■□□□□ 0.62
SHANK3-202ENST00000414786 GRID2IPA4D2P6 1211 aa18.94■□□□□ 0.62
SHANK3-202ENST00000414786 VPS4BO75351 444 aa18.94■□□□□ 0.62
SHANK3-202ENST00000414786 PTGISQ16647 500 aa18.94■□□□□ 0.62
SHANK3-202ENST00000414786 ITIH5Q86UX2 942 aa18.94■□□□□ 0.62
SHANK3-202ENST00000414786 ULK2Q8IYT8 1036 aa18.94■□□□□ 0.62
SHANK3-202ENST00000414786 SPATA4Q8NEY3 305 aa18.94■□□□□ 0.62
SHANK3-202ENST00000414786 TSPAN14Q8NG11 270 aa18.94■□□□□ 0.62
SHANK3-202ENST00000414786 CRYL1Q9Y2S2 319 aa18.94■□□□□ 0.62
SHANK3-202ENST00000414786 GTPBP1O00178 669 aaKnown RBP18.94■□□□□ 0.62
SHANK3-202ENST00000414786 GLT6D1Q7Z4J2 308 aa18.94■□□□□ 0.62
SHANK3-202ENST00000414786 SUSD6Q92537 303 aa18.94■□□□□ 0.62
SHANK3-202ENST00000414786 DHRS1Q96LJ7 313 aa18.94■□□□□ 0.62
SHANK3-202ENST00000414786 TMEM120AQ9BXJ8 343 aa18.94■□□□□ 0.62
SHANK3-202ENST00000414786 TRPC5OSA6NMA1 111 aa18.93■□□□□ 0.62
SHANK3-202ENST00000414786 PTGES3LE9PB15 166 aa18.93■□□□□ 0.62
SHANK3-202ENST00000414786 PSMD9O00233 223 aa18.93■□□□□ 0.62
SHANK3-202ENST00000414786 JAK1P23458 1154 aa18.93■□□□□ 0.62
SHANK3-202ENST00000414786 LRRC4BQ9NT99 713 aa18.93■□□□□ 0.62
SHANK3-202ENST00000414786 USP18Q9UMW8 372 aa18.93■□□□□ 0.62
SHANK3-202ENST00000414786 CDY2AQ9Y6F7 541 aa18.93■□□□□ 0.62
SHANK3-202ENST00000414786 CDY1Q9Y6F8 540 aa18.93■□□□□ 0.62
SHANK3-202ENST00000414786 CFAP73A6NFT4 308 aa18.93■□□□□ 0.62
SHANK3-202ENST00000414786 H0Y858 1186 aa18.93■□□□□ 0.62
SHANK3-202ENST00000414786 CRTAMO95727 393 aa18.93■□□□□ 0.62
SHANK3-202ENST00000414786 AMHP03971 560 aa18.93■□□□□ 0.62
SHANK3-202ENST00000414786 CYP2A7P20853 494 aa18.93■□□□□ 0.62
SHANK3-202ENST00000414786 TKTL1P51854 596 aa18.93■□□□□ 0.62
SHANK3-202ENST00000414786 MILR1Q7Z6M3 343 aa18.93■□□□□ 0.62
SHANK3-202ENST00000414786 SETD6Q8TBK2 473 aa18.93■□□□□ 0.62
SHANK3-202ENST00000414786 TRNT1Q96Q11 434 aaKnown RBP18.93■□□□□ 0.62
SHANK3-202ENST00000414786 SLITRK2Q9H156 845 aa18.93■□□□□ 0.62
SHANK3-202ENST00000414786 GRXCR2A6NFK2 248 aa18.93■□□□□ 0.62
SHANK3-202ENST00000414786 CYP4F2P78329 520 aa18.93■□□□□ 0.62
SHANK3-202ENST00000414786 CYP4F3Q08477 520 aa18.93■□□□□ 0.62
SHANK3-202ENST00000414786 SLC39A12Q504Y0 691 aa18.93■□□□□ 0.62
SHANK3-202ENST00000414786 FNDC5Q8NAU1 212 aa18.93■□□□□ 0.62
SHANK3-202ENST00000414786 ZNF473Q8WTR7 871 aaKnown RBP18.93■□□□□ 0.62
SHANK3-202ENST00000414786 MYMKA6NI61 221 aa18.93■□□□□ 0.62
SHANK3-202ENST00000414786 CLEC4GQ6UXB4 293 aa18.93■□□□□ 0.62
SHANK3-202ENST00000414786 TMEM26Q6ZUK4 368 aa18.93■□□□□ 0.62
SHANK3-202ENST00000414786 GALNTL5Q7Z4T8 443 aa18.93■□□□□ 0.62
SHANK3-202ENST00000414786 CLEC4AQ9UMR7 237 aa18.93■□□□□ 0.62
SHANK3-202ENST00000414786 TRIM24O15164 1050 aa18.93■□□□□ 0.62
SHANK3-202ENST00000414786 KLRC1P26715 233 aa18.93■□□□□ 0.62
SHANK3-202ENST00000414786 CTNNB1P35222 781 aa18.93■□□□□ 0.62
SHANK3-202ENST00000414786 BEX3Q00994 111 aa18.93■□□□□ 0.62
SHANK3-202ENST00000414786 RABL6Q3YEC7 729 aaPredicted RBP18.93■□□□□ 0.62
SHANK3-202ENST00000414786 AGKQ53H12 422 aa18.93■□□□□ 0.62
SHANK3-202ENST00000414786 TDRD5Q8NAT2 981 aaKnown RBP18.93■□□□□ 0.62
SHANK3-202ENST00000414786 CCSER1Q9C0I3 900 aa18.93■□□□□ 0.62
SHANK3-202ENST00000414786 PPP2R3BQ9Y5P8 575 aa18.93■□□□□ 0.62
SHANK3-202ENST00000414786 BUD23O43709 281 aaKnown RBP18.93■□□□□ 0.62
SHANK3-202ENST00000414786 UCHL3P15374 230 aa18.93■□□□□ 0.62
SHANK3-202ENST00000414786 FGFR3P22607 806 aa18.93■□□□□ 0.62
SHANK3-202ENST00000414786 MAPK1P28482 360 aa18.93■□□□□ 0.62
SHANK3-202ENST00000414786 MADCAM1Q13477 382 aa18.93■□□□□ 0.62
SHANK3-202ENST00000414786 C1DQ13901 141 aaKnown RBP18.93■□□□□ 0.62
SHANK3-202ENST00000414786 MXRA8Q9BRK3 442 aa18.93■□□□□ 0.62
SHANK3-202ENST00000414786 NIF3L1Q9GZT8 377 aa18.93■□□□□ 0.62
SHANK3-202ENST00000414786 SLC25A27O95847 323 aa18.92■□□□□ 0.62
SHANK3-202ENST00000414786 NTRK1P04629 796 aa18.92■□□□□ 0.62
SHANK3-202ENST00000414786 CASP9P55211 416 aa18.92■□□□□ 0.62
SHANK3-202ENST00000414786 NDUFAF6Q330K2 333 aa18.92■□□□□ 0.62
SHANK3-202ENST00000414786 ATP13A1Q9HD20 1204 aa18.92■□□□□ 0.62
SHANK3-202ENST00000414786 DCDC2Q9UHG0 476 aa18.92■□□□□ 0.62
SHANK3-202ENST00000414786 IGSF1Q8N6C5 1336 aa18.92■□□□□ 0.62
SHANK3-202ENST00000414786 DBIP07108 87 aaKnown RBP18.92■□□□□ 0.62
SHANK3-202ENST00000414786 DDR2Q16832 855 aa18.92■□□□□ 0.62
SHANK3-202ENST00000414786 GPR141Q7Z602 305 aa18.92■□□□□ 0.62
SHANK3-202ENST00000414786 MCOLN3Q8TDD5 553 aa18.92■□□□□ 0.62
SHANK3-202ENST00000414786 MTMR4Q9NYA4 1195 aa18.92■□□□□ 0.62
SHANK3-202ENST00000414786 DLGAP2Q9P1A6 1054 aa18.92■□□□□ 0.62
SHANK3-202ENST00000414786 ARF3P61204 181 aaPredicted RBP18.92■□□□□ 0.62
SHANK3-202ENST00000414786 ARF1P84077 181 aaKnown RBP18.92■□□□□ 0.62
SHANK3-202ENST00000414786 PFKPQ01813 784 aa18.92■□□□□ 0.62
SHANK3-202ENST00000414786 ATP1A4Q13733 1029 aa18.92■□□□□ 0.62
SHANK3-202ENST00000414786 CXorf40AQ8TE69 158 aa18.92■□□□□ 0.62
SHANK3-202ENST00000414786 ENTPD4Q9Y227 616 aa18.92■□□□□ 0.62
SHANK3-202ENST00000414786 SH3D21A4FU49 640 aa18.92■□□□□ 0.62
SHANK3-202ENST00000414786 ALOX12P18054 663 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms