RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 SMC6Q96SB8 1091 aa15.73■□□□□ 0.11
SCAMP4-202ENST00000409472 KCNK16Q96T55 309 aa15.73■□□□□ 0.11
SCAMP4-202ENST00000409472 HNRNPABQ99729 332 aaKnown RBP15.73■□□□□ 0.11
SCAMP4-202ENST00000409472 DUSP16Q9BY84 665 aa15.73■□□□□ 0.11
SCAMP4-202ENST00000409472 PHACTR1Q9C0D0 580 aa15.73■□□□□ 0.11
SCAMP4-202ENST00000409472 NSRP1Q9H0G5 558 aaKnown RBP15.73■□□□□ 0.11
SCAMP4-202ENST00000409472 ANLNQ9NQW6 1124 aa15.73■□□□□ 0.11
SCAMP4-202ENST00000409472 FAM105AQ9NUU6 356 aa15.73■□□□□ 0.11
SCAMP4-202ENST00000409472 PAK5Q9P286 719 aa15.73■□□□□ 0.11
SCAMP4-202ENST00000409472 BCLAF3A2AJT9 711 aaKnown RBP15.72■□□□□ 0.11
SCAMP4-202ENST00000409472 TTC36A6NLP5 189 aa15.72■□□□□ 0.11
SCAMP4-202ENST00000409472 CHADO15335 359 aa15.72■□□□□ 0.11
SCAMP4-202ENST00000409472 PRPF4O43172 522 aaKnown RBP eCLIP15.72■□□□□ 0.11
SCAMP4-202ENST00000409472 MATKP42679 507 aa15.72■□□□□ 0.11
SCAMP4-202ENST00000409472 FAM133BQ5BKY9 247 aaKnown RBP15.72■□□□□ 0.11
SCAMP4-202ENST00000409472 ADGRD1Q6QNK2 874 aa15.72■□□□□ 0.11
SCAMP4-202ENST00000409472 TNIP3Q96KP6 325 aa15.72■□□□□ 0.11
SCAMP4-202ENST00000409472 SENP8Q96LD8 212 aa15.72■□□□□ 0.11
SCAMP4-202ENST00000409472 LGMNQ99538 433 aa15.72■□□□□ 0.11
SCAMP4-202ENST00000409472 POPDC2Q9HBU9 364 aa15.72■□□□□ 0.11
SCAMP4-202ENST00000409472 DDX43Q9NXZ2 648 aaKnown RBP15.72■□□□□ 0.11
SCAMP4-202ENST00000409472 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.72■□□□□ 0.113e-7■■■□□ 15.7
SCAMP4-202ENST00000409472 USP15Q9Y4E8 981 aaPredicted RBP15.72■□□□□ 0.11
SCAMP4-202ENST00000409472 MYBPHLA2RUH7 354 aa15.72■□□□□ 0.11
SCAMP4-202ENST00000409472 GABRDO14764 452 aa15.72■□□□□ 0.11
SCAMP4-202ENST00000409472 FYNP06241 537 aa15.72■□□□□ 0.11
SCAMP4-202ENST00000409472 CYBAP13498 195 aa15.72■□□□□ 0.11
SCAMP4-202ENST00000409472 PHBP35232 272 aa15.72■□□□□ 0.11
SCAMP4-202ENST00000409472 RGMBQ6NW40 437 aa15.72■□□□□ 0.11
SCAMP4-202ENST00000409472 PPP1R21Q6ZMI0 780 aa15.72■□□□□ 0.11
SCAMP4-202ENST00000409472 ANKS4BQ8N8V4 417 aa15.72■□□□□ 0.11
SCAMP4-202ENST00000409472 ANKLE1Q8NAG6 615 aa15.72■□□□□ 0.11
SCAMP4-202ENST00000409472 SOCS4Q8WXH5 440 aa15.72■□□□□ 0.11
SCAMP4-202ENST00000409472 HSFY1Q96LI6 401 aa15.72■□□□□ 0.11
SCAMP4-202ENST00000409472 MED10Q9BTT4 135 aa15.72■□□□□ 0.11
SCAMP4-202ENST00000409472 HAUS2Q9NVX0 235 aa15.72■□□□□ 0.11
SCAMP4-202ENST00000409472 PIH1D1Q9NWS0 290 aaKnown RBP15.72■□□□□ 0.11
SCAMP4-202ENST00000409472 SLC17A7Q9P2U7 560 aa15.72■□□□□ 0.11
SCAMP4-202ENST00000409472 FZD10Q9ULW2 581 aa15.72■□□□□ 0.11
SCAMP4-202ENST00000409472 Q9Y3F1 56 aa15.72■□□□□ 0.11
SCAMP4-202ENST00000409472 TTLL3Q9Y4R7 772 aa15.72■□□□□ 0.11
SCAMP4-202ENST00000409472 CXorf49A8MYA2 514 aaPredicted RBP15.71■□□□□ 0.11
SCAMP4-202ENST00000409472 NDC80O14777 642 aa15.71■□□□□ 0.11
SCAMP4-202ENST00000409472 MGEA5O60502 916 aa15.71■□□□□ 0.11
SCAMP4-202ENST00000409472 UGT1A9O60656 530 aa15.71■□□□□ 0.11
SCAMP4-202ENST00000409472 RPSAP08865 295 aaKnown RBP15.71■□□□□ 0.11
SCAMP4-202ENST00000409472 ADRA1DP25100 572 aa15.71■□□□□ 0.11
SCAMP4-202ENST00000409472 MRPS5P82675 430 aaKnown RBP15.71■□□□□ 0.11
SCAMP4-202ENST00000409472 NR1H3Q13133 447 aa15.71■□□□□ 0.11
SCAMP4-202ENST00000409472 NME3Q13232 169 aa15.71■□□□□ 0.11
SCAMP4-202ENST00000409472 LACTB2Q53H82 288 aaPredicted RBP15.71■□□□□ 0.11
SCAMP4-202ENST00000409472 SLC45A4Q5BKX6 768 aa15.71■□□□□ 0.11
SCAMP4-202ENST00000409472 TAF2Q6P1X5 1199 aa15.71■□□□□ 0.11
SCAMP4-202ENST00000409472 AGMOQ6ZNB7 445 aa15.71■□□□□ 0.11
SCAMP4-202ENST00000409472 TRPM8Q7Z2W7 1104 aa15.71■□□□□ 0.11
SCAMP4-202ENST00000409472 SPATA21Q7Z572 469 aa15.71■□□□□ 0.11
SCAMP4-202ENST00000409472 NME8Q8N427 588 aa15.71■□□□□ 0.11
SCAMP4-202ENST00000409472 ZMIZ2Q8NF64 920 aa15.71■□□□□ 0.11
SCAMP4-202ENST00000409472 SERAC1Q96JX3 654 aa15.71■□□□□ 0.11
SCAMP4-202ENST00000409472 SENP6Q9GZR1 1112 aaPredicted RBP15.71■□□□□ 0.11
SCAMP4-202ENST00000409472 UGT1A7Q9HAW7 530 aa15.71■□□□□ 0.11
SCAMP4-202ENST00000409472 UGT1A10Q9HAW8 530 aa15.71■□□□□ 0.11
SCAMP4-202ENST00000409472 UGT1A8Q9HAW9 530 aa15.71■□□□□ 0.11
SCAMP4-202ENST00000409472 ARHGEF4Q9NR80 690 aa15.71■□□□□ 0.11
SCAMP4-202ENST00000409472 SMYD2Q9NRG4 433 aa15.71■□□□□ 0.11
SCAMP4-202ENST00000409472 PIGVQ9NUD9 493 aa15.71■□□□□ 0.11
SCAMP4-202ENST00000409472 TRPV2Q9Y5S1 764 aa15.71■□□□□ 0.11
SCAMP4-202ENST00000409472 ARL5CA6NH57 179 aa15.71■□□□□ 0.11
SCAMP4-202ENST00000409472 DUSP11O75319 330 aaKnown RBP15.71■□□□□ 0.11
SCAMP4-202ENST00000409472 DAB1O75553 588 aa15.71■□□□□ 0.11
SCAMP4-202ENST00000409472 ACADSBP45954 432 aa15.71■□□□□ 0.11
SCAMP4-202ENST00000409472 TKTL1P51854 596 aa15.71■□□□□ 0.11
SCAMP4-202ENST00000409472 SLC25A52Q3SY17 297 aa15.71■□□□□ 0.11
SCAMP4-202ENST00000409472 HASPINQ8TF76 798 aa15.71■□□□□ 0.11
SCAMP4-202ENST00000409472 PCED1BQ96HM7 432 aa15.71■□□□□ 0.11
SCAMP4-202ENST00000409472 QKIQ96PU8 341 aaKnown RBP eCLIP15.71■□□□□ 0.11
SCAMP4-202ENST00000409472 SMOQ99835 787 aa15.71■□□□□ 0.11
SCAMP4-202ENST00000409472 ULBP1Q9BZM6 244 aa15.71■□□□□ 0.11
SCAMP4-202ENST00000409472 BPTFQ12830 3046 aa15.71■□□□□ 0.11
SCAMP4-202ENST00000409472 EME2A4GXA9 379 aaPredicted RBP15.7■□□□□ 0.1
SCAMP4-202ENST00000409472 YJEFN3A6XGL0 299 aa15.7■□□□□ 0.1
SCAMP4-202ENST00000409472 E7ENQ6 273 aa15.7■□□□□ 0.1
SCAMP4-202ENST00000409472 FAM72CH0Y354 149 aa15.7■□□□□ 0.1
SCAMP4-202ENST00000409472 SKAP2O75563 359 aaPredicted RBP15.7■□□□□ 0.1
SCAMP4-202ENST00000409472 UBOX5O94941 541 aa15.7■□□□□ 0.1
SCAMP4-202ENST00000409472 GNAT1P11488 350 aa15.7■□□□□ 0.1
SCAMP4-202ENST00000409472 SCNN1AP37088 669 aa15.7■□□□□ 0.1
SCAMP4-202ENST00000409472 PEX19P40855 299 aa15.7■□□□□ 0.1
SCAMP4-202ENST00000409472 MSH2P43246 934 aa15.7■□□□□ 0.1
SCAMP4-202ENST00000409472 SNX16P57768 344 aa15.7■□□□□ 0.1
SCAMP4-202ENST00000409472 FAAP100Q0VG06 881 aa15.7■□□□□ 0.1
SCAMP4-202ENST00000409472 KLHL38Q2WGJ6 581 aa15.7■□□□□ 0.1
SCAMP4-202ENST00000409472 FAM72AQ5TYM5 149 aa15.7■□□□□ 0.1
SCAMP4-202ENST00000409472 FAM72DQ6L9T8 149 aa15.7■□□□□ 0.1
SCAMP4-202ENST00000409472 LVRNQ6Q4G3 990 aa15.7■□□□□ 0.1
SCAMP4-202ENST00000409472 DENND5BQ6ZUT9 1274 aa15.7■□□□□ 0.1
SCAMP4-202ENST00000409472 STRADAQ7RTN6 431 aa15.7■□□□□ 0.1
SCAMP4-202ENST00000409472 FAM72BQ86X60 149 aa15.7■□□□□ 0.1
SCAMP4-202ENST00000409472 OLFM3Q96PB7 478 aa15.7■□□□□ 0.1
SCAMP4-202ENST00000409472 MTG1Q9BT17 334 aaPredicted RBP15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms