RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 LTFP02788 710 aa14.35□□□□□ -0.11
CXCL12-205ENST00000395794 CISD3P0C7P0 127 aa14.35□□□□□ -0.11
CXCL12-205ENST00000395794 ERCC5P28715 1186 aaPredicted RBP14.35□□□□□ -0.11
CXCL12-205ENST00000395794 WASP42768 502 aa14.35□□□□□ -0.11
CXCL12-205ENST00000395794 ACADSBP45954 432 aa14.35□□□□□ -0.11
CXCL12-205ENST00000395794 CREB5Q02930 508 aa14.35□□□□□ -0.11
CXCL12-205ENST00000395794 ARHGAP44Q17R89 818 aa14.35□□□□□ -0.11
CXCL12-205ENST00000395794 MPPE1Q53F39 396 aa14.35□□□□□ -0.11
CXCL12-205ENST00000395794 FYB2Q5VWT5 728 aa14.35□□□□□ -0.11
CXCL12-205ENST00000395794 EGFLAMQ63HQ2 1017 aa14.35□□□□□ -0.11
CXCL12-205ENST00000395794 TOGARAM2Q6ZUX3 1019 aa14.35□□□□□ -0.11
CXCL12-205ENST00000395794 BHLHA9Q7RTU4 235 aa14.35□□□□□ -0.11
CXCL12-205ENST00000395794 UNC45BQ8IWX7 931 aa14.35□□□□□ -0.11
CXCL12-205ENST00000395794 GBP4Q96PP9 640 aa14.35□□□□□ -0.11
CXCL12-205ENST00000395794 ZSWIM1Q9BR11 485 aa14.35□□□□□ -0.11
CXCL12-205ENST00000395794 RTKNQ9BST9 563 aa14.35□□□□□ -0.11
CXCL12-205ENST00000395794 SLC2A11Q9BYW1 496 aa14.35□□□□□ -0.11
CXCL12-205ENST00000395794 VPS45Q9NRW7 570 aa14.35□□□□□ -0.11
CXCL12-205ENST00000395794 APEX2Q9UBZ4 518 aa14.35□□□□□ -0.11
CXCL12-205ENST00000395794 GPR179Q6PRD1 2367 aa14.34□□□□□ -0.11
CXCL12-205ENST00000395794 PRRT4C9JH25 899 aa14.34□□□□□ -0.11
CXCL12-205ENST00000395794 NPC1O15118 1278 aa14.34□□□□□ -0.11
CXCL12-205ENST00000395794 LATS1O95835 1130 aa14.34□□□□□ -0.11
CXCL12-205ENST00000395794 ZNF806P0C7X5 589 aa14.34□□□□□ -0.11
CXCL12-205ENST00000395794 NCAM1P13591 858 aa14.34□□□□□ -0.11
CXCL12-205ENST00000395794 PRKCSHP14314 528 aaPredicted RBP14.34□□□□□ -0.11
CXCL12-205ENST00000395794 HNRNPLP14866 589 aaKnown RBP eCLIP14.34□□□□□ -0.11
CXCL12-205ENST00000395794 SLC9A1P19634 815 aa14.34□□□□□ -0.11
CXCL12-205ENST00000395794 GNA15P30679 374 aa14.34□□□□□ -0.11
CXCL12-205ENST00000395794 MPLP40238 635 aa14.34□□□□□ -0.11
CXCL12-205ENST00000395794 SLC11A2P49281 568 aa14.34□□□□□ -0.11
CXCL12-205ENST00000395794 ARID5AQ03989 594 aa14.34□□□□□ -0.11
CXCL12-205ENST00000395794 CCDC6Q16204 474 aa14.34□□□□□ -0.11
CXCL12-205ENST00000395794 MEA1Q16626 185 aa14.34□□□□□ -0.11
CXCL12-205ENST00000395794 MAN2A1Q16706 1144 aa14.34□□□□□ -0.11
CXCL12-205ENST00000395794 NUGGCQ68CJ6 796 aa14.34□□□□□ -0.11
CXCL12-205ENST00000395794 LPCAT2Q7L5N7 544 aa14.34□□□□□ -0.11
CXCL12-205ENST00000395794 ANKS1BQ7Z6G8 1248 aa14.34□□□□□ -0.11
CXCL12-205ENST00000395794 SCUBE3Q8IX30 993 aa14.34□□□□□ -0.11
CXCL12-205ENST00000395794 STK32AQ8WU08 396 aa14.34□□□□□ -0.11
CXCL12-205ENST00000395794 FAM149B1Q96BN6 582 aa14.34□□□□□ -0.11
CXCL12-205ENST00000395794 FBXO10Q9UK96 956 aa14.34□□□□□ -0.11
CXCL12-205ENST00000395794 SLC27A6Q9Y2P4 619 aa14.34□□□□□ -0.11
CXCL12-205ENST00000395794 GFRA2O00451 464 aa14.33□□□□□ -0.12
CXCL12-205ENST00000395794 PES1O00541 588 aaKnown RBP14.33□□□□□ -0.12
CXCL12-205ENST00000395794 CAPN9O14815 690 aa14.33□□□□□ -0.12
CXCL12-205ENST00000395794 MSI1O43347 362 aaKnown RBP14.33□□□□□ -0.12
CXCL12-205ENST00000395794 TIMM44O43615 452 aa14.33□□□□□ -0.12
CXCL12-205ENST00000395794 TSPAN3O60637 253 aa14.33□□□□□ -0.12
CXCL12-205ENST00000395794 CAVIN2O95810 425 aa14.33□□□□□ -0.12
CXCL12-205ENST00000395794 CHRM1P11229 460 aaPredicted RBP14.33□□□□□ -0.12
CXCL12-205ENST00000395794 P2RY2P41231 377 aa14.33□□□□□ -0.12
CXCL12-205ENST00000395794 GPD2P43304 727 aa14.33□□□□□ -0.12
CXCL12-205ENST00000395794 DHPSP49366 369 aaPredicted RBP14.33□□□□□ -0.12
CXCL12-205ENST00000395794 ATXN1P54253 815 aaKnown RBP14.33□□□□□ -0.12
CXCL12-205ENST00000395794 STARD3Q14849 445 aa14.33□□□□□ -0.12
CXCL12-205ENST00000395794 SF3A2Q15428 464 aaKnown RBP14.33□□□□□ -0.12
CXCL12-205ENST00000395794 DPCR1Q3MIW9 517 aa14.33□□□□□ -0.12
CXCL12-205ENST00000395794 CT47A1Q5JQC4 288 aaPredicted RBP14.33□□□□□ -0.12
CXCL12-205ENST00000395794 ADGRF1Q5T601 910 aa14.33□□□□□ -0.12
CXCL12-205ENST00000395794 PMS2CLQ68D20 193 aa14.33□□□□□ -0.12
CXCL12-205ENST00000395794 MSANTD2Q6P1R3 559 aa14.33□□□□□ -0.12
CXCL12-205ENST00000395794 DENND1BQ6P3S1 775 aa14.33□□□□□ -0.12
CXCL12-205ENST00000395794 IRF2BP1Q8IU81 584 aa14.33□□□□□ -0.12
CXCL12-205ENST00000395794 FAM217AQ8IXS0 508 aa14.33□□□□□ -0.12
CXCL12-205ENST00000395794 OLIG1Q8TAK6 271 aa14.33□□□□□ -0.12
CXCL12-205ENST00000395794 ZNF606Q8WXB4 792 aa14.33□□□□□ -0.12
CXCL12-205ENST00000395794 RLN3Q8WXF3 142 aa14.33□□□□□ -0.12
CXCL12-205ENST00000395794 TMA16Q96EY4 203 aaKnown RBP14.33□□□□□ -0.12
CXCL12-205ENST00000395794 MED15Q96RN5 788 aa14.33□□□□□ -0.12
CXCL12-205ENST00000395794 DDX50Q9BQ39 737 aaKnown RBP14.33□□□□□ -0.12
CXCL12-205ENST00000395794 BCLAF3A2AJT9 711 aaKnown RBP14.32□□□□□ -0.12
CXCL12-205ENST00000395794 TYW5A2RUC4 315 aaKnown RBP14.32□□□□□ -0.12
CXCL12-205ENST00000395794 GOLGA6L22H0YM25 854 aa14.32□□□□□ -0.12
CXCL12-205ENST00000395794 SYNCRIPO60506 623 aaKnown RBP14.32□□□□□ -0.12
CXCL12-205ENST00000395794 ZNF217O75362 1048 aa14.32□□□□□ -0.12
CXCL12-205ENST00000395794 PON1P27169 355 aa14.32□□□□□ -0.12
CXCL12-205ENST00000395794 TBX4P57082 545 aa14.32□□□□□ -0.12
CXCL12-205ENST00000395794 SNX16P57768 344 aa14.32□□□□□ -0.12
CXCL12-205ENST00000395794 PTK2Q05397 1052 aa14.32□□□□□ -0.12
CXCL12-205ENST00000395794 EIF4HQ15056 248 aaKnown RBP14.32□□□□□ -0.12
CXCL12-205ENST00000395794 VWA3BQ502W6 1294 aa14.32□□□□□ -0.12
CXCL12-205ENST00000395794 PLA2G2CQ5R387 149 aa14.32□□□□□ -0.12
CXCL12-205ENST00000395794 IL31Q6EBC2 164 aa14.32□□□□□ -0.12
CXCL12-205ENST00000395794 SMYD5Q6GMV2 418 aa14.32□□□□□ -0.12
CXCL12-205ENST00000395794 GJB7Q6PEY0 223 aa14.32□□□□□ -0.12
CXCL12-205ENST00000395794 SLC36A4Q6YBV0 504 aa14.32□□□□□ -0.12
CXCL12-205ENST00000395794 CLEC17AQ6ZS10 378 aa14.32□□□□□ -0.12
CXCL12-205ENST00000395794 CYP2U1Q7Z449 544 aa14.32□□□□□ -0.12
CXCL12-205ENST00000395794 IPO4Q8TEX9 1081 aaKnown RBP14.32□□□□□ -0.12
CXCL12-205ENST00000395794 CLEC4CQ8WTT0 213 aa14.32□□□□□ -0.12
CXCL12-205ENST00000395794 SERPINB11Q96P15 392 aa14.32□□□□□ -0.12
CXCL12-205ENST00000395794 NOX5Q96PH1 765 aa14.32□□□□□ -0.12
CXCL12-205ENST00000395794 ACOX2Q99424 681 aa14.32□□□□□ -0.12
CXCL12-205ENST00000395794 GABRG3Q99928 467 aa14.32□□□□□ -0.12
CXCL12-205ENST00000395794 TUBGCP2Q9BSJ2 902 aa14.32□□□□□ -0.12
CXCL12-205ENST00000395794 CIPCQ9C0C6 399 aa14.32□□□□□ -0.12
CXCL12-205ENST00000395794 NDST4Q9H3R1 872 aa14.32□□□□□ -0.12
CXCL12-205ENST00000395794 CACNA2D2Q9NY47 1150 aa14.32□□□□□ -0.12
CXCL12-205ENST00000395794 STOML2Q9UJZ1 356 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms