RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 PDXKO00764 312 aa15.1■□□□□ 0.01
CCDC50-201ENST00000392455 SLC18A3Q16572 532 aa15.1■□□□□ 0.01
CCDC50-201ENST00000392455 CCDC144BQ3MJ40 725 aa15.1■□□□□ 0.01
CCDC50-201ENST00000392455 SMIM5Q71RC9 77 aa15.1■□□□□ 0.01
CCDC50-201ENST00000392455 DEPDC4Q8N2C3 294 aa15.1■□□□□ 0.01
CCDC50-201ENST00000392455 SMYD1Q8NB12 490 aa15.1■□□□□ 0.01
CCDC50-201ENST00000392455 AKAP1Q92667 903 aaKnown RBP eCLIP15.1■□□□□ 0.01
CCDC50-201ENST00000392455 TMEM143Q96AN5 459 aa15.1■□□□□ 0.01
CCDC50-201ENST00000392455 TTC26A0AVF1 554 aa15.1■□□□□ 0.01
CCDC50-201ENST00000392455 ALOX5P09917 674 aa15.1■□□□□ 0.01
CCDC50-201ENST00000392455 TPP2P29144 1249 aaPredicted RBP15.1■□□□□ 0.01
CCDC50-201ENST00000392455 MEA1Q16626 185 aa15.1■□□□□ 0.01
CCDC50-201ENST00000392455 STOX1Q6ZVD7 989 aa15.1■□□□□ 0.01
CCDC50-201ENST00000392455 ZNF513Q8N8E2 541 aaPredicted RBP15.1■□□□□ 0.01
CCDC50-201ENST00000392455 MS4A14Q96JA4 679 aa15.1■□□□□ 0.01
CCDC50-201ENST00000392455 PPP1R10Q96QC0 940 aaKnown RBP15.1■□□□□ 0.01
CCDC50-201ENST00000392455 LOC102724159A0A0B4J2E5 919 aa15.1■□□□□ 0.01
CCDC50-201ENST00000392455 PSMD11O00231 422 aa15.1■□□□□ 0.01
CCDC50-201ENST00000392455 ZNF682O95780 498 aa15.1■□□□□ 0.01
CCDC50-201ENST00000392455 HOXB8P17481 243 aaPredicted RBP15.1■□□□□ 0.01
CCDC50-201ENST00000392455 ACOT2P49753 483 aa15.1■□□□□ 0.01
CCDC50-201ENST00000392455 OLR1P78380 273 aa15.1■□□□□ 0.01
CCDC50-201ENST00000392455 SCRN3Q0VDG4 424 aa15.1■□□□□ 0.01
CCDC50-201ENST00000392455 PRKAA1Q13131 559 aa15.1■□□□□ 0.01
CCDC50-201ENST00000392455 PWP2Q15269 919 aaKnown RBP15.1■□□□□ 0.01
CCDC50-201ENST00000392455 RBBP8NLQ8NC74 664 aaPredicted RBP15.1■□□□□ 0.01
CCDC50-201ENST00000392455 TMEM216Q9P0N5 145 aa15.1■□□□□ 0.01
CCDC50-201ENST00000392455 PRDM15P57071 1507 aaPredicted RBP15.1■□□□□ 0.01
CCDC50-201ENST00000392455 RGS14O43566 566 aa15.1■□□□□ 0.01
CCDC50-201ENST00000392455 PDGFRBP09619 1106 aa15.1■□□□□ 0.01
CCDC50-201ENST00000392455 NMT1P30419 496 aaKnown RBP15.1■□□□□ 0.01
CCDC50-201ENST00000392455 CHI3L2Q15782 390 aa15.1■□□□□ 0.01
CCDC50-201ENST00000392455 WDR72Q3MJ13 1102 aa15.1■□□□□ 0.01
CCDC50-201ENST00000392455 C11orf96Q7Z7L8 435 aa15.1■□□□□ 0.01
CCDC50-201ENST00000392455 USP7Q93009 1102 aa15.1■□□□□ 0.01
CCDC50-201ENST00000392455 MYDGFQ969H8 173 aa15.1■□□□□ 0.01
CCDC50-201ENST00000392455 NT5C1AQ9BXI3 368 aa15.1■□□□□ 0.01
CCDC50-201ENST00000392455 AGAP1Q9UPQ3 857 aa15.1■□□□□ 0.01
CCDC50-201ENST00000392455 CTSHP09668 335 aa15.1■□□□□ 0.01
CCDC50-201ENST00000392455 LRRC71Q8N4P6 559 aa15.1■□□□□ 0.01
CCDC50-201ENST00000392455 ELOVL6Q9H5J4 265 aa15.1■□□□□ 0.01
CCDC50-201ENST00000392455 ANKRD6Q9Y2G4 727 aa15.1■□□□□ 0.01
CCDC50-201ENST00000392455 UBTFL6P0CB48 400 aaPredicted RBP15.1■□□□□ 0.01
CCDC50-201ENST00000392455 PSME3P61289 254 aa15.1■□□□□ 0.01
CCDC50-201ENST00000392455 EIF5AP63241 154 aaKnown RBP15.1■□□□□ 0.01
CCDC50-201ENST00000392455 BST2Q10589 180 aaKnown RBP15.1■□□□□ 0.01
CCDC50-201ENST00000392455 QPRTQ15274 297 aa15.1■□□□□ 0.01
CCDC50-201ENST00000392455 GPALPP1Q8IXQ4 340 aa15.1■□□□□ 0.01
CCDC50-201ENST00000392455 PHACTR4Q8IZ21 702 aa15.1■□□□□ 0.01
CCDC50-201ENST00000392455 MCOLN3Q8TDD5 553 aa15.1■□□□□ 0.01
CCDC50-201ENST00000392455 MCEEQ96PE7 176 aa15.1■□□□□ 0.01
CCDC50-201ENST00000392455 SEPT5Q99719 369 aaPredicted RBP15.1■□□□□ 0.01
CCDC50-201ENST00000392455 WDR12Q9GZL7 423 aaKnown RBP15.1■□□□□ 0.01
CCDC50-201ENST00000392455 CYP2A7P20853 494 aa15.09■□□□□ 0.01
CCDC50-201ENST00000392455 OASLQ15646 514 aaKnown RBP15.09■□□□□ 0.01
CCDC50-201ENST00000392455 SGO1Q5FBB7 561 aa15.09■□□□□ 0.01
CCDC50-201ENST00000392455 MB21D2Q8IYB1 491 aaPredicted RBP15.09■□□□□ 0.01
CCDC50-201ENST00000392455 LRRC4BQ9NT99 713 aa15.09■□□□□ 0.01
CCDC50-201ENST00000392455 PRKAG3Q9UGI9 489 aa15.09■□□□□ 0.01
CCDC50-201ENST00000392455 WEE2P0C1S8 567 aa15.09■□□□□ 0.01
CCDC50-201ENST00000392455 GEMP55040 296 aa15.09■□□□□ 0.01
CCDC50-201ENST00000392455 ARF5P84085 180 aa15.09■□□□□ 0.01
CCDC50-201ENST00000392455 ZDHHC13Q8IUH4 622 aa15.09■□□□□ 0.01
CCDC50-201ENST00000392455 KYQ8NBH2 561 aa15.09■□□□□ 0.01
CCDC50-201ENST00000392455 TMIEQ8NEW7 156 aa15.09■□□□□ 0.01
CCDC50-201ENST00000392455 EMC3Q9P0I2 261 aa15.09■□□□□ 0.01
CCDC50-201ENST00000392455 WHRNQ9P202 907 aa15.09■□□□□ 0.01
CCDC50-201ENST00000392455 APEX2Q9UBZ4 518 aa15.09■□□□□ 0.01
CCDC50-201ENST00000392455 ITIH6Q6UXX5 1313 aa15.09■□□□□ 0.01
CCDC50-201ENST00000392455 GLI2P10070 1586 aa15.09■□□□□ 0.01
CCDC50-201ENST00000392455 C1orf232A0A0U1RR37 186 aa15.09■□□□□ 0.01
CCDC50-201ENST00000392455 TEX33O43247 280 aa15.09■□□□□ 0.01
CCDC50-201ENST00000392455 ACSL4O60488 711 aa15.09■□□□□ 0.01
CCDC50-201ENST00000392455 ITGA2P17301 1181 aa15.09■□□□□ 0.01
CCDC50-201ENST00000392455 HSD3B2P26439 372 aa15.09■□□□□ 0.01
CCDC50-201ENST00000392455 IL5RAQ01344 420 aa15.09■□□□□ 0.01
CCDC50-201ENST00000392455 EIF3MQ7L2H7 374 aaKnown RBP15.09■□□□□ 0.01
CCDC50-201ENST00000392455 TMEM120BA0PK00 339 aa15.09■□□□□ 0.01
CCDC50-201ENST00000392455 POLRMTO00411 1230 aaKnown RBP15.09■□□□□ 0.01
CCDC50-201ENST00000392455 EYA4O95677 639 aa15.09■□□□□ 0.01
CCDC50-201ENST00000392455 POLNQ7Z5Q5 900 aa15.09■□□□□ 0.01
CCDC50-201ENST00000392455 ARHGEF40Q8TER5 1519 aa15.09■□□□□ 0.01
CCDC50-201ENST00000392455 AFF2P51816 1311 aa15.09■□□□□ 0.01
CCDC50-201ENST00000392455 SAGE2PA6NJ88 616 aa15.09■□□□□ 0.01
CCDC50-201ENST00000392455 SCGNO76038 276 aa15.09■□□□□ 0.01
CCDC50-201ENST00000392455 ALOX12P18054 663 aa15.09■□□□□ 0.01
CCDC50-201ENST00000392455 TCN1P20061 433 aaPredicted RBP15.09■□□□□ 0.01
CCDC50-201ENST00000392455 RGS1Q08116 209 aa15.09■□□□□ 0.01
CCDC50-201ENST00000392455 PRR5LQ6MZQ0 368 aa15.09■□□□□ 0.01
CCDC50-201ENST00000392455 TRPC4APQ8TEL6 797 aa15.09■□□□□ 0.01
CCDC50-201ENST00000392455 IL1RL2Q9HB29 575 aa15.09■□□□□ 0.01
CCDC50-201ENST00000392455 HPS4Q9NQG7 708 aa15.09■□□□□ 0.01
CCDC50-201ENST00000392455 CDH7Q9ULB5 785 aa15.09■□□□□ 0.01
CCDC50-201ENST00000392455 SCAF8Q9UPN6 1271 aaKnown RBP15.09■□□□□ 0.01
CCDC50-201ENST00000392455 GNRH1P01148 92 aa15.09■□□□□ 0.01
CCDC50-201ENST00000392455 IGKV5-2P06315 115 aa15.09■□□□□ 0.01
CCDC50-201ENST00000392455 MYL9P24844 172 aa15.09■□□□□ 0.01
CCDC50-201ENST00000392455 UGT1A5P35504 534 aa15.09■□□□□ 0.01
CCDC50-201ENST00000392455 PTSQ03393 145 aa15.09■□□□□ 0.01
CCDC50-201ENST00000392455 PROSER1Q86XN7 944 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms