RNA–Protein interactions for RNA: ENST00000375425.9

NELFE-201, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NELFE, Length 1,405 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-201ENST00000375425 FMNL3Q8IVF7 1028 aa14.89□□□□□ -0.03
NELFE-201ENST00000375425 SIX6OS1Q8N1H7 587 aa14.89□□□□□ -0.03
NELFE-201ENST00000375425 DEFB119Q8N690 84 aa14.89□□□□□ -0.03
NELFE-201ENST00000375425 RNF139Q8WU17 664 aa14.89□□□□□ -0.03
NELFE-201ENST00000375425 KCTD13Q8WZ19 329 aa14.89□□□□□ -0.03
NELFE-201ENST00000375425 PLD4Q96BZ4 506 aa14.89□□□□□ -0.03
NELFE-201ENST00000375425 ZSWIM1Q9BR11 485 aa14.89□□□□□ -0.03
NELFE-201ENST00000375425 OLA1Q9NTK5 396 aaKnown RBP14.89□□□□□ -0.03
NELFE-201ENST00000375425 SFMBT1Q9UHJ3 866 aa14.89□□□□□ -0.03
NELFE-201ENST00000375425 CLEC4EQ9ULY5 219 aa14.89□□□□□ -0.03
NELFE-201ENST00000375425 RAD54BQ9Y620 910 aa14.89□□□□□ -0.03
NELFE-201ENST00000375425 CNOT1A5YKK6 2376 aaKnown RBP14.89□□□□□ -0.03
NELFE-201ENST00000375425 P4HA2O15460 535 aa14.88□□□□□ -0.03
NELFE-201ENST00000375425 CYBBP04839 570 aa14.88□□□□□ -0.03
NELFE-201ENST00000375425 SETSIPP0DME0 302 aa14.88□□□□□ -0.03
NELFE-201ENST00000375425 NDUFV2P19404 249 aa14.88□□□□□ -0.03
NELFE-201ENST00000375425 HARS2P49590 506 aaKnown RBP14.88□□□□□ -0.03
NELFE-201ENST00000375425 RGS7P49802 495 aa14.88□□□□□ -0.03
NELFE-201ENST00000375425 RPL6Q02878 288 aaKnown RBP14.88□□□□□ -0.03
NELFE-201ENST00000375425 KCNH2Q12809 1159 aa14.88□□□□□ -0.03
NELFE-201ENST00000375425 PMF1Q6P1K2 205 aa14.88□□□□□ -0.03
NELFE-201ENST00000375425 SYT12Q8IV01 421 aa14.88□□□□□ -0.03
NELFE-201ENST00000375425 CPXM2Q8N436 756 aa14.88□□□□□ -0.03
NELFE-201ENST00000375425 EHBP1Q8NDI1 1231 aa14.88□□□□□ -0.03
NELFE-201ENST00000375425 DDI1Q8WTU0 396 aa14.88□□□□□ -0.03
NELFE-201ENST00000375425 SLC35F5Q8WV83 523 aa14.88□□□□□ -0.03
NELFE-201ENST00000375425 PIWIL1Q96J94 861 aaKnown RBP14.88□□□□□ -0.03
NELFE-201ENST00000375425 SRRTQ9BXP5 876 aaKnown RBP14.88□□□□□ -0.03
NELFE-201ENST00000375425 CNGB3Q9NQW8 809 aa14.88□□□□□ -0.03
NELFE-201ENST00000375425 ABCC13Q9NSE7 274 aa14.88□□□□□ -0.03
NELFE-201ENST00000375425 CTNND2Q9UQB3 1225 aa14.88□□□□□ -0.03
NELFE-201ENST00000375425 THADAQ6YHU6 1953 aa14.88□□□□□ -0.03
NELFE-201ENST00000375425 ASPMQ8IZT6 3477 aa14.87□□□□□ -0.03
NELFE-201ENST00000375425 PIK3R2O00459 728 aa14.87□□□□□ -0.03
NELFE-201ENST00000375425 CDX4O14627 284 aaPredicted RBP14.87□□□□□ -0.03
NELFE-201ENST00000375425 AP5Z1O43299 807 aa14.87□□□□□ -0.03
NELFE-201ENST00000375425 ZNF217O75362 1048 aa14.87□□□□□ -0.03
NELFE-201ENST00000375425 GABBR2O75899 941 aa14.87□□□□□ -0.03
NELFE-201ENST00000375425 KCNK5O95279 499 aa14.87□□□□□ -0.03
NELFE-201ENST00000375425 GNA14O95837 355 aa14.87□□□□□ -0.03
NELFE-201ENST00000375425 CALCAP01258 141 aa14.87□□□□□ -0.03
NELFE-201ENST00000375425 ITPKAP23677 461 aa14.87□□□□□ -0.03
NELFE-201ENST00000375425 DAOAP59103 153 aa14.87□□□□□ -0.03
NELFE-201ENST00000375425 TRIM61Q5EBN2 209 aa14.87□□□□□ -0.03
NELFE-201ENST00000375425 N4BP2L1Q5TBK1 243 aaPredicted RBP14.87□□□□□ -0.03
NELFE-201ENST00000375425 LYSMD4Q5XG99 296 aa14.87□□□□□ -0.03
NELFE-201ENST00000375425 SLC36A4Q6YBV0 504 aa14.87□□□□□ -0.03
NELFE-201ENST00000375425 TRIM59Q8IWR1 403 aa14.87□□□□□ -0.03
NELFE-201ENST00000375425 FAM217AQ8IXS0 508 aa14.87□□□□□ -0.03
NELFE-201ENST00000375425 SCML4Q8N228 414 aa14.87□□□□□ -0.03
NELFE-201ENST00000375425 MRGPRX1Q96LB2 322 aa14.87□□□□□ -0.03
NELFE-201ENST00000375425 SLC6A17Q9H1V8 727 aa14.87□□□□□ -0.03
NELFE-201ENST00000375425 TMEM9BQ9NQ34 198 aa14.87□□□□□ -0.03
NELFE-201ENST00000375425 THAP10Q9P2Z0 257 aaPredicted RBP14.87□□□□□ -0.03
NELFE-201ENST00000375425 EVLQ9UI08 416 aaPredicted RBP14.87□□□□□ -0.03
NELFE-201ENST00000375425 PILRBQ9UKJ0 227 aa14.87□□□□□ -0.03
NELFE-201ENST00000375425 CYP8B1Q9UNU6 501 aa14.87□□□□□ -0.03
NELFE-201ENST00000375425 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.87□□□□□ -0.03
NELFE-201ENST00000375425 HBS1LQ9Y450 684 aaKnown RBP14.87□□□□□ -0.03
NELFE-201ENST00000375425 STON1Q9Y6Q2 735 aa14.87□□□□□ -0.03
NELFE-201ENST00000375425 GON4LQ3T8J9 2241 aa14.87□□□□□ -0.03
NELFE-201ENST00000375425 IGHV1OR15-9A0A0B4J2B8 117 aa14.86□□□□□ -0.03
NELFE-201ENST00000375425 M0QYV0 167 aa14.86□□□□□ -0.03
NELFE-201ENST00000375425 BRD2P25440 801 aaKnown RBP14.86□□□□□ -0.03
NELFE-201ENST00000375425 IL12RB1P42701 662 aa14.86□□□□□ -0.03
NELFE-201ENST00000375425 GCNT1Q02742 428 aa14.86□□□□□ -0.03
NELFE-201ENST00000375425 ZNF33AQ06730 810 aa14.86□□□□□ -0.03
NELFE-201ENST00000375425 PAK1Q13153 545 aa14.86□□□□□ -0.03
NELFE-201ENST00000375425 STILQ15468 1287 aa14.86□□□□□ -0.03
NELFE-201ENST00000375425 DAB2IPQ5VWQ8 1189 aa14.86□□□□□ -0.03
NELFE-201ENST00000375425 ARHGEF19Q8IW93 802 aa14.86□□□□□ -0.03
NELFE-201ENST00000375425 RBBP8NLQ8NC74 664 aaPredicted RBP14.86□□□□□ -0.03
NELFE-201ENST00000375425 UCMAQ8WVF2 138 aa14.86□□□□□ -0.03
NELFE-201ENST00000375425 NUSAP1Q9BXS6 441 aaKnown RBP14.86□□□□□ -0.03
NELFE-201ENST00000375425 ELOVL2Q9NXB9 296 aa14.86□□□□□ -0.03
NELFE-201ENST00000375425 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.86□□□□□ -0.03
NELFE-201ENST00000375425 TPRP12270 2363 aaKnown RBP14.86□□□□□ -0.03
NELFE-201ENST00000375425 NPC1O15118 1278 aa14.85□□□□□ -0.03
NELFE-201ENST00000375425 MSI1O43347 362 aaKnown RBP14.85□□□□□ -0.03
NELFE-201ENST00000375425 TSPAN3O60637 253 aa14.85□□□□□ -0.03
NELFE-201ENST00000375425 AFPP02771 609 aaKnown RBP14.85□□□□□ -0.03
NELFE-201ENST00000375425 MARSP56192 900 aaKnown RBP14.85□□□□□ -0.03
NELFE-201ENST00000375425 LMAN2Q12907 356 aa14.85□□□□□ -0.03
NELFE-201ENST00000375425 MPPE1Q53F39 396 aa14.85□□□□□ -0.03
NELFE-201ENST00000375425 TMEM215Q68D42 235 aa14.85□□□□□ -0.03
NELFE-201ENST00000375425 PSAPL1Q6NUJ1 521 aa14.85□□□□□ -0.03
NELFE-201ENST00000375425 SLC23A3Q6PIS1 610 aa14.85□□□□□ -0.03
NELFE-201ENST00000375425 ANKS1BQ7Z6G8 1248 aa14.85□□□□□ -0.03
NELFE-201ENST00000375425 TMA16Q96EY4 203 aaKnown RBP14.85□□□□□ -0.03
NELFE-201ENST00000375425 HSFY1Q96LI6 401 aa14.85□□□□□ -0.03
NELFE-201ENST00000375425 SLC2A11Q9BYW1 496 aa14.85□□□□□ -0.03
NELFE-201ENST00000375425 CD93Q9NPY3 652 aa14.85□□□□□ -0.03
NELFE-201ENST00000375425 STOML2Q9UJZ1 356 aa14.85□□□□□ -0.03
NELFE-201ENST00000375425 ATXN2Q99700 1313 aaKnown RBP14.85□□□□□ -0.03
NELFE-201ENST00000375425 TIMM44O43615 452 aa14.84□□□□□ -0.03
NELFE-201ENST00000375425 HOXD9P28356 352 aaPredicted RBP14.84□□□□□ -0.03
NELFE-201ENST00000375425 DPP6P42658 865 aa14.84□□□□□ -0.03
NELFE-201ENST00000375425 ZNF132P52740 706 aa14.84□□□□□ -0.03
NELFE-201ENST00000375425 ENPP2Q13822 863 aa14.84□□□□□ -0.03
NELFE-201ENST00000375425 STARD3Q14849 445 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms