RNA–Protein interactions for RNA: ENST00000368215.7

PTPRK-206, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 4,651 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-206ENST00000368215 Q9H521 79 aa8.72□□□□□ -1.01
PTPRK-206ENST00000368215 VANGL2Q9ULK5 521 aa8.72□□□□□ -1.01
PTPRK-206ENST00000368215 ANGPTL3Q9Y5C1 460 aa8.72□□□□□ -1.01
PTPRK-206ENST00000368215 CNTNAP2Q9UHC6 1331 aa8.72□□□□□ -1.01
PTPRK-206ENST00000368215 STRCQ7RTU9 1775 aa8.71□□□□□ -1.01
PTPRK-206ENST00000368215 ECHS1P30084 290 aa8.71□□□□□ -1.01
PTPRK-206ENST00000368215 ANKRD20A2Q5SQ80 823 aa8.71□□□□□ -1.01
PTPRK-206ENST00000368215 ANKRD20A1Q5TYW2 823 aa8.71□□□□□ -1.01
PTPRK-206ENST00000368215 IQSEC1Q6DN90 963 aa8.71□□□□□ -1.01
PTPRK-206ENST00000368215 CXCL17Q6UXB2 119 aa8.71□□□□□ -1.01
PTPRK-206ENST00000368215 TEX9Q8N6V9 391 aa8.71□□□□□ -1.01
PTPRK-206ENST00000368215 POU5F2Q8N7G0 328 aa8.71□□□□□ -1.01
PTPRK-206ENST00000368215 TMA16Q96EY4 203 aaKnown RBP8.71□□□□□ -1.01
PTPRK-206ENST00000368215 FAM237BA0A1B0GVD1 139 aa8.71□□□□□ -1.01
PTPRK-206ENST00000368215 TYW5A2RUC4 315 aaKnown RBP8.71□□□□□ -1.01
PTPRK-206ENST00000368215 GOLGA8CPA6NN73 597 aa8.71□□□□□ -1.01
PTPRK-206ENST00000368215 NVLO15381 856 aaKnown RBP8.71□□□□□ -1.01
PTPRK-206ENST00000368215 UPP2O95045 317 aa8.71□□□□□ -1.01
PTPRK-206ENST00000368215 PTPN1P18031 435 aaKnown RBP8.71□□□□□ -1.01
PTPRK-206ENST00000368215 BDNFP23560 247 aa8.71□□□□□ -1.01
PTPRK-206ENST00000368215 PTPN4P29074 926 aa8.71□□□□□ -1.01
PTPRK-206ENST00000368215 SCNN1GP51170 649 aa8.71□□□□□ -1.01
PTPRK-206ENST00000368215 ATXN1P54253 815 aaKnown RBP8.71□□□□□ -1.01
PTPRK-206ENST00000368215 YWHAHQ04917 246 aaPredicted RBP8.71□□□□□ -1.01
PTPRK-206ENST00000368215 MGAT5Q09328 741 aa8.71□□□□□ -1.01
PTPRK-206ENST00000368215 PTP4A2Q12974 167 aa8.71□□□□□ -1.01
PTPRK-206ENST00000368215 TSTA3Q13630 321 aaPredicted RBP8.71□□□□□ -1.01
PTPRK-206ENST00000368215 PDCD2Q16342 344 aaPredicted RBP8.71□□□□□ -1.01
PTPRK-206ENST00000368215 PDK4Q16654 411 aa8.71□□□□□ -1.01
PTPRK-206ENST00000368215 USP50Q70EL3 339 aaPredicted RBP8.71□□□□□ -1.01
PTPRK-206ENST00000368215 NKD2Q969F2 451 aaPredicted RBP8.71□□□□□ -1.01
PTPRK-206ENST00000368215 PRDM12Q9H4Q4 367 aa8.71□□□□□ -1.01
PTPRK-206ENST00000368215 CHST12Q9NRB3 414 aa8.71□□□□□ -1.01
PTPRK-206ENST00000368215 DONSONQ9NYP3 566 aa8.71□□□□□ -1.01
PTPRK-206ENST00000368215 GGA2Q9UJY4 613 aa8.71□□□□□ -1.01
PTPRK-206ENST00000368215 PCDHGC3Q9UN70 934 aa8.71□□□□□ -1.01
PTPRK-206ENST00000368215 NR2E3Q9Y5X4 410 aa8.71□□□□□ -1.01
PTPRK-206ENST00000368215 ACTL7BQ9Y614 415 aa8.71□□□□□ -1.01
PTPRK-206ENST00000368215 E9PBE3 544 aa8.71□□□□□ -1.02
PTPRK-206ENST00000368215 CHADO15335 359 aa8.71□□□□□ -1.02
PTPRK-206ENST00000368215 KLHL41O60662 606 aa8.71□□□□□ -1.02
PTPRK-206ENST00000368215 RALBP11234 206 aa8.71□□□□□ -1.02
PTPRK-206ENST00000368215 MPP3Q13368 585 aa8.71□□□□□ -1.02
PTPRK-206ENST00000368215 RBBP5Q15291 538 aaKnown RBP8.71□□□□□ -1.02
PTPRK-206ENST00000368215 DNAL1Q4LDG9 190 aa8.71□□□□□ -1.02
PTPRK-206ENST00000368215 RNASEH2BQ5TBB1 312 aaKnown RBP8.71□□□□□ -1.02
PTPRK-206ENST00000368215 B3GNT9Q6UX72 402 aa8.71□□□□□ -1.02
PTPRK-206ENST00000368215 ZDHHC17Q8IUH5 632 aa8.71□□□□□ -1.02
PTPRK-206ENST00000368215 TMEM130Q8N3G9 435 aa8.71□□□□□ -1.02
PTPRK-206ENST00000368215 ANKRD52Q8NB46 1076 aa8.71□□□□□ -1.02
PTPRK-206ENST00000368215 OR52K1Q8NGK4 314 aa8.71□□□□□ -1.02
PTPRK-206ENST00000368215 AGAP11Q8TF27 550 aa8.71□□□□□ -1.02
PTPRK-206ENST00000368215 DNAJC9Q8WXX5 260 aa8.71□□□□□ -1.02
PTPRK-206ENST00000368215 CD101Q93033 1021 aa8.71□□□□□ -1.02
PTPRK-206ENST00000368215 RMDN2Q96LZ7 410 aa8.71□□□□□ -1.02
PTPRK-206ENST00000368215 STRA6Q9BX79 667 aa8.71□□□□□ -1.02
PTPRK-206ENST00000368215 FZD8Q9H461 694 aa8.71□□□□□ -1.02
PTPRK-206ENST00000368215 DPEP3Q9H4B8 488 aa8.71□□□□□ -1.02
PTPRK-206ENST00000368215 LOC102724159A0A0B4J2E5 919 aa8.71□□□□□ -1.02
PTPRK-206ENST00000368215 MTSS1O43312 755 aa8.71□□□□□ -1.02
PTPRK-206ENST00000368215 TSPAN1O60635 241 aa8.71□□□□□ -1.02
PTPRK-206ENST00000368215 CDC25CP30307 473 aa8.71□□□□□ -1.02
PTPRK-206ENST00000368215 GRM5P41594 1212 aa8.71□□□□□ -1.02
PTPRK-206ENST00000368215 PWP2Q15269 919 aaKnown RBP8.71□□□□□ -1.02
PTPRK-206ENST00000368215 UGP2Q16851 508 aa8.71□□□□□ -1.02
PTPRK-206ENST00000368215 LCLAT1Q6UWP7 414 aa8.71□□□□□ -1.02
PTPRK-206ENST00000368215 OTOAQ7RTW8 1153 aa8.71□□□□□ -1.02
PTPRK-206ENST00000368215 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.71□□□□□ -1.02
PTPRK-206ENST00000368215 B3GALNT2Q8NCR0 500 aa8.71□□□□□ -1.02
PTPRK-206ENST00000368215 PCYT2Q99447 389 aa8.71□□□□□ -1.02
PTPRK-206ENST00000368215 TRIM62Q9BVG3 475 aa8.71□□□□□ -1.02
PTPRK-206ENST00000368215 MAGEB5Q9BZ81 275 aa8.71□□□□□ -1.02
PTPRK-206ENST00000368215 CATSPERBQ9H7T0 1116 aa8.71□□□□□ -1.02
PTPRK-206ENST00000368215 IL1RAPL1Q9NZN1 696 aa8.71□□□□□ -1.02
PTPRK-206ENST00000368215 SKAP2O75563 359 aaPredicted RBP8.7□□□□□ -1.02
PTPRK-206ENST00000368215 CPA3P15088 417 aa8.7□□□□□ -1.02
PTPRK-206ENST00000368215 YBX3P16989 372 aaKnown RBP eCLIP8.7□□□□□ -1.022e-6■□□□□ 10.6
PTPRK-206ENST00000368215 SOX11P35716 441 aa8.7□□□□□ -1.02
PTPRK-206ENST00000368215 LHX1P48742 406 aa8.7□□□□□ -1.02
PTPRK-206ENST00000368215 RABGGTBP53611 331 aa8.7□□□□□ -1.02
PTPRK-206ENST00000368215 GAD2Q05329 585 aa8.7□□□□□ -1.02
PTPRK-206ENST00000368215 NOMO1Q15155 1222 aa8.7□□□□□ -1.02
PTPRK-206ENST00000368215 FSCN1Q16658 493 aaKnown RBP8.7□□□□□ -1.02
PTPRK-206ENST00000368215 C10orf120Q5SQS8 335 aa8.7□□□□□ -1.02
PTPRK-206ENST00000368215 TFAP2DQ7Z6R9 452 aa8.7□□□□□ -1.02
PTPRK-206ENST00000368215 UNC93AQ86WB7 457 aa8.7□□□□□ -1.02
PTPRK-206ENST00000368215 DDIASQ8IXT1 998 aa8.7□□□□□ -1.02
PTPRK-206ENST00000368215 PLD5Q8N7P1 536 aa8.7□□□□□ -1.02
PTPRK-206ENST00000368215 STKLD1Q8NE28 680 aa8.7□□□□□ -1.02
PTPRK-206ENST00000368215 PPTC7Q8NI37 304 aa8.7□□□□□ -1.02
PTPRK-206ENST00000368215 ZFP42Q96MM3 310 aa8.7□□□□□ -1.02
PTPRK-206ENST00000368215 FICDQ9BVA6 458 aa8.7□□□□□ -1.02
PTPRK-206ENST00000368215 TSPYL2Q9H2G4 693 aaPredicted RBP8.7□□□□□ -1.02
PTPRK-206ENST00000368215 CXorf56Q9H5V9 222 aa8.7□□□□□ -1.02
PTPRK-206ENST00000368215 CYP4F12Q9HCS2 524 aa8.7□□□□□ -1.02
PTPRK-206ENST00000368215 STARD13Q9Y3M8 1113 aa8.7□□□□□ -1.02
PTPRK-206ENST00000368215 NRCAMQ92823 1304 aa8.7□□□□□ -1.02
PTPRK-206ENST00000368215 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.7□□□□□ -1.02
PTPRK-206ENST00000368215 MEI4A8MW99 385 aa8.7□□□□□ -1.02
PTPRK-206ENST00000368215 BTBD19C9JJ37 291 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms