RNA–Protein interactions for RNA: ENST00000354421.7

C11orf54-202, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 1,733 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-202ENST00000354421 TFDP3Q5H9I0 405 aa7.79□□□□□ -1.16
C11orf54-202ENST00000354421 KAZNQ674X7 775 aa7.79□□□□□ -1.16
C11orf54-202ENST00000354421 PDSS2Q86YH6 399 aa7.79□□□□□ -1.16
C11orf54-202ENST00000354421 TREML1Q86YW5 311 aa7.79□□□□□ -1.16
C11orf54-202ENST00000354421 RHPN2Q8IUC4 686 aa7.79□□□□□ -1.16
C11orf54-202ENST00000354421 PALM2Q8IXS6 379 aa7.79□□□□□ -1.16
C11orf54-202ENST00000354421 ULK2Q8IYT8 1036 aa7.79□□□□□ -1.16
C11orf54-202ENST00000354421 NME8Q8N427 588 aa7.79□□□□□ -1.16
C11orf54-202ENST00000354421 SAMD3Q8N6K7 520 aa7.79□□□□□ -1.16
C11orf54-202ENST00000354421 NIPA2Q8N8Q9 360 aa7.79□□□□□ -1.16
C11orf54-202ENST00000354421 RBM15BQ8NDT2 890 aaKnown RBP7.79□□□□□ -1.16
C11orf54-202ENST00000354421 FBXO36Q8NEA4 188 aa7.79□□□□□ -1.16
C11orf54-202ENST00000354421 RAB3IL1Q8TBN0 382 aa7.79□□□□□ -1.16
C11orf54-202ENST00000354421 NAT14Q8WUY8 206 aa7.79□□□□□ -1.16
C11orf54-202ENST00000354421 SERAC1Q96JX3 654 aa7.79□□□□□ -1.16
C11orf54-202ENST00000354421 PRRX2Q99811 253 aa7.79□□□□□ -1.16
C11orf54-202ENST00000354421 NTPCRQ9BSD7 190 aaKnown RBP7.79□□□□□ -1.16
C11orf54-202ENST00000354421 CCDC106Q9BWC9 280 aa7.79□□□□□ -1.16
C11orf54-202ENST00000354421 WWP1Q9H0M0 922 aa7.79□□□□□ -1.16
C11orf54-202ENST00000354421 AGO4Q9HCK5 861 aaKnown RBP7.79□□□□□ -1.16
C11orf54-202ENST00000354421 TIMMDC1Q9NPL8 285 aa7.79□□□□□ -1.16
C11orf54-202ENST00000354421 IRAK4Q9NWZ3 460 aa7.79□□□□□ -1.16
C11orf54-202ENST00000354421 SORCS3Q9UPU3 1222 aa7.79□□□□□ -1.16
C11orf54-202ENST00000354421 UBIAD1Q9Y5Z9 338 aa7.79□□□□□ -1.16
C11orf54-202ENST00000354421 IVNS1ABPQ9Y6Y0 642 aa7.79□□□□□ -1.16
C11orf54-202ENST00000354421 USP9XQ93008 2570 aaPredicted RBP7.79□□□□□ -1.16
C11orf54-202ENST00000354421 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.78□□□□□ -1.16
C11orf54-202ENST00000354421 FAM237BA0A1B0GVD1 139 aa7.78□□□□□ -1.16
C11orf54-202ENST00000354421 SMIM31A0A1B0GVY4 71 aa7.78□□□□□ -1.16
C11orf54-202ENST00000354421 KRBA1A5PL33 1030 aa7.78□□□□□ -1.16
C11orf54-202ENST00000354421 C3orf70A6NLC5 250 aaPredicted RBP7.78□□□□□ -1.16
C11orf54-202ENST00000354421 I3L4J1 428 aa7.78□□□□□ -1.16
C11orf54-202ENST00000354421 GOLGA8RI6L899 631 aa7.78□□□□□ -1.16
C11orf54-202ENST00000354421 DDX39AO00148 427 aaKnown RBP7.78□□□□□ -1.16
C11orf54-202ENST00000354421 AP1G1O43747 822 aa7.78□□□□□ -1.16
C11orf54-202ENST00000354421 RNASEH1O60930 286 aaKnown RBP7.78□□□□□ -1.16
C11orf54-202ENST00000354421 RAD17O75943 681 aa7.78□□□□□ -1.16
C11orf54-202ENST00000354421 GH2P01242 217 aa7.78□□□□□ -1.16
C11orf54-202ENST00000354421 C4BPAP04003 597 aaKnown RBP7.78□□□□□ -1.16
C11orf54-202ENST00000354421 CALB1P05937 261 aa7.78□□□□□ -1.16
C11orf54-202ENST00000354421 ENO1P06733 434 aaKnown RBP7.78□□□□□ -1.16
C11orf54-202ENST00000354421 ZCCHC18P0CG32 403 aa7.78□□□□□ -1.16
C11orf54-202ENST00000354421 TCF4P15884 667 aa7.78□□□□□ -1.16
C11orf54-202ENST00000354421 ATF7P17544 494 aaPredicted RBP7.78□□□□□ -1.16
C11orf54-202ENST00000354421 MMP8P22894 467 aa7.78□□□□□ -1.16
C11orf54-202ENST00000354421 YWHABP31946 246 aaKnown RBP7.78□□□□□ -1.16
C11orf54-202ENST00000354421 STIP1P31948 543 aaKnown RBP7.78□□□□□ -1.16
C11orf54-202ENST00000354421 RPL22P35268 128 aaKnown RBP7.78□□□□□ -1.16
C11orf54-202ENST00000354421 NPTX2P47972 431 aa7.78□□□□□ -1.16
C11orf54-202ENST00000354421 FKBP1AP62942 108 aaKnown RBP7.78□□□□□ -1.16
C11orf54-202ENST00000354421 JAG1P78504 1218 aa7.78□□□□□ -1.16
C11orf54-202ENST00000354421 ZNF200P98182 395 aaPredicted RBP7.78□□□□□ -1.16
C11orf54-202ENST00000354421 GAD2Q05329 585 aa7.78□□□□□ -1.16
C11orf54-202ENST00000354421 FAAP100Q0VG06 881 aa7.78□□□□□ -1.16
C11orf54-202ENST00000354421 ASPHQ12797 758 aa7.78□□□□□ -1.16
C11orf54-202ENST00000354421 CLN3Q13286 438 aa7.78□□□□□ -1.16
C11orf54-202ENST00000354421 PTK7Q13308 1070 aa7.78□□□□□ -1.16
C11orf54-202ENST00000354421 PIGHQ14442 188 aaPredicted RBP7.78□□□□□ -1.16
C11orf54-202ENST00000354421 TAZQ16635 292 aa7.78□□□□□ -1.16
C11orf54-202ENST00000354421 ZACNQ401N2 412 aa7.78□□□□□ -1.16
C11orf54-202ENST00000354421 C2CD6Q53TS8 623 aa7.78□□□□□ -1.16
C11orf54-202ENST00000354421 ATG16L1Q676U5 607 aa7.78□□□□□ -1.16
C11orf54-202ENST00000354421 BBS12Q6ZW61 710 aa7.78□□□□□ -1.16
C11orf54-202ENST00000354421 TAS1R3Q7RTX0 852 aa7.78□□□□□ -1.16
C11orf54-202ENST00000354421 POLNQ7Z5Q5 900 aa7.78□□□□□ -1.16
C11orf54-202ENST00000354421 LCA5Q86VQ0 697 aa7.78□□□□□ -1.16
C11orf54-202ENST00000354421 PIP4K2CQ8TBX8 421 aa7.78□□□□□ -1.16
C11orf54-202ENST00000354421 FAM172AQ8WUF8 416 aa7.78□□□□□ -1.16
C11orf54-202ENST00000354421 CHURC1Q8WUH1 139 aa7.78□□□□□ -1.16
C11orf54-202ENST00000354421 POMGNT1Q8WZA1 660 aa7.78□□□□□ -1.16
C11orf54-202ENST00000354421 TTC17Q96AE7 1141 aa7.78□□□□□ -1.16
C11orf54-202ENST00000354421 MTBPQ96DY7 904 aa7.78□□□□□ -1.16
C11orf54-202ENST00000354421 FAM111AQ96PZ2 611 aa7.78□□□□□ -1.16
C11orf54-202ENST00000354421 KLF6Q99612 283 aaPredicted RBP7.78□□□□□ -1.16
C11orf54-202ENST00000354421 DDX50Q9BQ39 737 aaKnown RBP7.78□□□□□ -1.16
C11orf54-202ENST00000354421 TMEM121Q9BTD3 319 aa7.78□□□□□ -1.16
C11orf54-202ENST00000354421 ARHGAP39Q9C0H5 1083 aa7.78□□□□□ -1.16
C11orf54-202ENST00000354421 ZCWPW1Q9H0M4 648 aa7.78□□□□□ -1.16
C11orf54-202ENST00000354421 S100A14Q9HCY8 104 aa7.78□□□□□ -1.16
C11orf54-202ENST00000354421 ALG13Q9NP73 1137 aaKnown RBP7.78□□□□□ -1.16
C11orf54-202ENST00000354421 GPRC5CQ9NQ84 441 aa7.78□□□□□ -1.16
C11orf54-202ENST00000354421 KLHL11Q9NVR0 708 aa7.78□□□□□ -1.16
C11orf54-202ENST00000354421 ARMCX1Q9P291 453 aa7.78□□□□□ -1.16
C11orf54-202ENST00000354421 SLC7A8Q9UHI5 535 aa7.78□□□□□ -1.16
C11orf54-202ENST00000354421 SEC23IPQ9Y6Y8 1000 aaKnown RBP7.78□□□□□ -1.16
C11orf54-202ENST00000354421 ASTN2O75129 1339 aaPredicted RBP7.78□□□□□ -1.16
C11orf54-202ENST00000354421 C2orf71A6NGG8 1288 aa7.78□□□□□ -1.16
C11orf54-202ENST00000354421 BTBD19C9JJ37 291 aa7.78□□□□□ -1.16
C11orf54-202ENST00000354421 E5RJQ4 531 aa7.78□□□□□ -1.16
C11orf54-202ENST00000354421 GOLGA8SH3BPF8 625 aa7.78□□□□□ -1.16
C11orf54-202ENST00000354421 H3BRJ5 948 aa7.78□□□□□ -1.16
C11orf54-202ENST00000354421 GOLGA8MH3BSY2 632 aa7.78□□□□□ -1.16
C11orf54-202ENST00000354421 CCNT2O60583 730 aaKnown RBP7.78□□□□□ -1.16
C11orf54-202ENST00000354421 LSM8O95777 96 aaKnown RBP7.78□□□□□ -1.16
C11orf54-202ENST00000354421 UQCRBP14927 111 aa7.78□□□□□ -1.16
C11orf54-202ENST00000354421 AOC1P19801 751 aa7.78□□□□□ -1.16
C11orf54-202ENST00000354421 GNA15P30679 374 aa7.78□□□□□ -1.16
C11orf54-202ENST00000354421 CPA2P48052 419 aa7.78□□□□□ -1.16
C11orf54-202ENST00000354421 PSMC5P62195 406 aa7.78□□□□□ -1.16
C11orf54-202ENST00000354421 TCP10Q12799 353 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 165.9 ms