RNA–Protein interactions for RNA: ENST00000339307.8

ITGA4-202, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ITGA4, Length 1,403 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-202ENST00000339307 CNOT1A5YKK6 2376 aaKnown RBP20.34■□□□□ 0.85
ITGA4-202ENST00000339307 GFRA2O00451 464 aa20.34■□□□□ 0.85
ITGA4-202ENST00000339307 SYNCRIPO60506 623 aaKnown RBP20.34■□□□□ 0.85
ITGA4-202ENST00000339307 TSPAN3O60637 253 aa20.34■□□□□ 0.85
ITGA4-202ENST00000339307 PENKP01210 267 aaPredicted RBP20.34■□□□□ 0.85
ITGA4-202ENST00000339307 VDRP11473 427 aa20.34■□□□□ 0.85
ITGA4-202ENST00000339307 LCP1P13796 627 aa20.34■□□□□ 0.85
ITGA4-202ENST00000339307 TBXAS1P24557 533 aaPredicted RBP20.34■□□□□ 0.85
ITGA4-202ENST00000339307 HARS2P49590 506 aaKnown RBP20.34■□□□□ 0.85
ITGA4-202ENST00000339307 MFAP3P55082 362 aa20.34■□□□□ 0.85
ITGA4-202ENST00000339307 GFPT1Q06210 699 aaPredicted RBP20.34■□□□□ 0.85
ITGA4-202ENST00000339307 FOXC1Q12948 553 aa20.34■□□□□ 0.85
ITGA4-202ENST00000339307 DUOXA1Q1HG43 343 aa20.34■□□□□ 0.85
ITGA4-202ENST00000339307 TMEM270Q6UE05 265 aa20.34■□□□□ 0.85
ITGA4-202ENST00000339307 TRIML1Q8N9V2 468 aa20.34■□□□□ 0.85
ITGA4-202ENST00000339307 DEFB124Q8NES8 71 aa20.34■□□□□ 0.85
ITGA4-202ENST00000339307 ENGASEQ8NFI3 743 aa20.34■□□□□ 0.85
ITGA4-202ENST00000339307 CEP76Q8TAP6 659 aa20.34■□□□□ 0.85
ITGA4-202ENST00000339307 SLC35C1Q96A29 364 aa20.34■□□□□ 0.85
ITGA4-202ENST00000339307 PLD4Q96BZ4 506 aa20.34■□□□□ 0.85
ITGA4-202ENST00000339307 P2RY11Q96G91 374 aa20.34■□□□□ 0.85
ITGA4-202ENST00000339307 MRGPRX1Q96LB2 322 aa20.34■□□□□ 0.85
ITGA4-202ENST00000339307 HSPA12BQ96MM6 686 aa20.34■□□□□ 0.85
ITGA4-202ENST00000339307 GTPBP4Q9BZE4 634 aaKnown RBP20.34■□□□□ 0.85
ITGA4-202ENST00000339307 METTL14Q9HCE5 456 aaKnown RBP20.34■□□□□ 0.85
ITGA4-202ENST00000339307 OLA1Q9NTK5 396 aaKnown RBP20.34■□□□□ 0.85
ITGA4-202ENST00000339307 SFMBT1Q9UHJ3 866 aa20.34■□□□□ 0.85
ITGA4-202ENST00000339307 SLC6A14Q9UN76 642 aa20.34■□□□□ 0.85
ITGA4-202ENST00000339307 PIK3R2O00459 728 aa20.33■□□□□ 0.84
ITGA4-202ENST00000339307 PM20D1Q6GTS8 502 aa20.33■□□□□ 0.84
ITGA4-202ENST00000339307 SLC23A3Q6PIS1 610 aa20.33■□□□□ 0.84
ITGA4-202ENST00000339307 ANKS1BQ7Z6G8 1248 aa20.33■□□□□ 0.84
ITGA4-202ENST00000339307 HDDC3Q8N4P3 179 aa20.33■□□□□ 0.84
ITGA4-202ENST00000339307 NT5C1BQ96P26 610 aa20.33■□□□□ 0.84
ITGA4-202ENST00000339307 CD93Q9NPY3 652 aa20.33■□□□□ 0.84
ITGA4-202ENST00000339307 FBXO10Q9UK96 956 aa20.33■□□□□ 0.84
ITGA4-202ENST00000339307 SLC27A6Q9Y2P4 619 aa20.33■□□□□ 0.84
ITGA4-202ENST00000339307 FMO5P49326 533 aa20.32■□□□□ 0.84
ITGA4-202ENST00000339307 RGS7P49802 495 aa20.32■□□□□ 0.84
ITGA4-202ENST00000339307 CETN1Q12798 172 aa20.32■□□□□ 0.84
ITGA4-202ENST00000339307 FUT11Q495W5 492 aa20.32■□□□□ 0.84
ITGA4-202ENST00000339307 BSPRYQ5W0U4 402 aa20.32■□□□□ 0.84
ITGA4-202ENST00000339307 ZC3H3Q8IXZ2 948 aaKnown RBP20.32■□□□□ 0.84
ITGA4-202ENST00000339307 PPM1KQ8N3J5 372 aa20.32■□□□□ 0.84
ITGA4-202ENST00000339307 DHTKD1Q96HY7 919 aaPredicted RBP20.32■□□□□ 0.84
ITGA4-202ENST00000339307 TIGD1Q96MW7 591 aa20.32■□□□□ 0.84
ITGA4-202ENST00000339307 SLC32A1Q9H598 525 aa20.32■□□□□ 0.84
ITGA4-202ENST00000339307 PRDM16Q9HAZ2 1276 aa20.32■□□□□ 0.84
ITGA4-202ENST00000339307 KIAA1257Q9ULG3 409 aa20.32■□□□□ 0.84
ITGA4-202ENST00000339307 CLEC4EQ9ULY5 219 aa20.32■□□□□ 0.84
ITGA4-202ENST00000339307 CEP192Q8TEP8 1941 aa20.31■□□□□ 0.84
ITGA4-202ENST00000339307 TPRP12270 2363 aaKnown RBP20.31■□□□□ 0.84
ITGA4-202ENST00000339307 YJEFN3A6XGL0 299 aa20.31■□□□□ 0.84
ITGA4-202ENST00000339307 E7ENQ6 273 aa20.31■□□□□ 0.84
ITGA4-202ENST00000339307 CEACAM1P13688 526 aa20.31■□□□□ 0.84
ITGA4-202ENST00000339307 IL12RB1P42701 662 aa20.31■□□□□ 0.84
ITGA4-202ENST00000339307 SYCP2LQ5T4T6 812 aa20.31■□□□□ 0.84
ITGA4-202ENST00000339307 CACUL1Q86Y37 369 aa20.31■□□□□ 0.84
ITGA4-202ENST00000339307 SLC41A1Q8IVJ1 513 aa20.31■□□□□ 0.84
ITGA4-202ENST00000339307 SORCS1Q8WY21 1168 aa20.31■□□□□ 0.84
ITGA4-202ENST00000339307 ELOVL2Q9NXB9 296 aa20.31■□□□□ 0.84
ITGA4-202ENST00000339307 THAP10Q9P2Z0 257 aaPredicted RBP20.31■□□□□ 0.84
ITGA4-202ENST00000339307 MAN1B1Q9UKM7 699 aa20.31■□□□□ 0.84
ITGA4-202ENST00000339307 GON4LQ3T8J9 2241 aa20.3■□□□□ 0.84
ITGA4-202ENST00000339307 PLXND1Q9Y4D7 1925 aa20.3■□□□□ 0.84
ITGA4-202ENST00000339307 O00370 1275 aa20.3■□□□□ 0.84
ITGA4-202ENST00000339307 SERPINF2P08697 491 aa20.3■□□□□ 0.84
ITGA4-202ENST00000339307 SETSIPP0DME0 302 aa20.3■□□□□ 0.84
ITGA4-202ENST00000339307 CSRP1P21291 193 aaKnown RBP20.3■□□□□ 0.84
ITGA4-202ENST00000339307 HOXD12P35452 270 aa20.3■□□□□ 0.84
ITGA4-202ENST00000339307 MPPE1Q53F39 396 aa20.3■□□□□ 0.84
ITGA4-202ENST00000339307 RABEPKQ7Z6M1 372 aa20.3■□□□□ 0.84
ITGA4-202ENST00000339307 CPXM2Q8N436 756 aa20.3■□□□□ 0.84
ITGA4-202ENST00000339307 SPATA20Q8TB22 786 aa20.3■□□□□ 0.84
ITGA4-202ENST00000339307 GOLGA1Q92805 767 aa20.3■□□□□ 0.84
ITGA4-202ENST00000339307 CEP63Q96MT8 703 aa20.3■□□□□ 0.84
ITGA4-202ENST00000339307 CD248Q9HCU0 757 aa20.3■□□□□ 0.84
ITGA4-202ENST00000339307 ABCC13Q9NSE7 274 aa20.3■□□□□ 0.84
ITGA4-202ENST00000339307 LAMA1P25391 3075 aa20.3■□□□□ 0.84
ITGA4-202ENST00000339307 TNRC6BQ9UPQ9 1833 aaKnown RBP20.3■□□□□ 0.84
ITGA4-202ENST00000339307 MEI4A8MW99 385 aa20.29■□□□□ 0.84
ITGA4-202ENST00000339307 M0QYV0 167 aa20.29■□□□□ 0.84
ITGA4-202ENST00000339307 NPC1O15118 1278 aa20.29■□□□□ 0.84
ITGA4-202ENST00000339307 MSI1O43347 362 aaKnown RBP20.29■□□□□ 0.84
ITGA4-202ENST00000339307 EPHX1P07099 455 aa20.29■□□□□ 0.84
ITGA4-202ENST00000339307 ACADMP11310 421 aa20.29■□□□□ 0.84
ITGA4-202ENST00000339307 CD44P16070 742 aaKnown RBP20.29■□□□□ 0.84
ITGA4-202ENST00000339307 MAOBP27338 520 aa20.29■□□□□ 0.84
ITGA4-202ENST00000339307 CD6P30203 668 aa20.29■□□□□ 0.84
ITGA4-202ENST00000339307 SHC2P98077 582 aa20.29■□□□□ 0.84
ITGA4-202ENST00000339307 ZNF234Q14588 700 aa20.29■□□□□ 0.84
ITGA4-202ENST00000339307 E2F5Q15329 346 aa20.29■□□□□ 0.84
ITGA4-202ENST00000339307 TRIP4Q15650 581 aaPredicted RBP20.29■□□□□ 0.84
ITGA4-202ENST00000339307 PLEKHG6Q3KR16 790 aa20.29■□□□□ 0.84
ITGA4-202ENST00000339307 SERPINA13PQ6UXR4 307 aa20.29■□□□□ 0.84
ITGA4-202ENST00000339307 RRAGAQ7L523 313 aa20.29■□□□□ 0.84
ITGA4-202ENST00000339307 BHLHA9Q7RTU4 235 aa20.29■□□□□ 0.84
ITGA4-202ENST00000339307 NELFBQ8WX92 580 aa20.29■□□□□ 0.84
ITGA4-202ENST00000339307 TFAP2BQ92481 460 aa20.29■□□□□ 0.84
ITGA4-202ENST00000339307 TMA16Q96EY4 203 aaKnown RBP20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms