RNA–Protein interactions for RNA: ENST00000278833.3

ROM1-201, Transcript of retinal outer segment membrane protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ROM1, Length 1,878 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-201ENST00000278833 SCUBE3Q8IX30 993 aa25.92■■□□□ 1.74
ROM1-201ENST00000278833 PPM1NQ8N819 430 aa25.92■■□□□ 1.74
ROM1-201ENST00000278833 ENDOVQ8N8Q3 282 aaKnown RBP25.92■■□□□ 1.74
ROM1-201ENST00000278833 FAM13CQ8NE31 585 aa25.92■■□□□ 1.74
ROM1-201ENST00000278833 PTCD3Q96EY7 689 aaKnown RBP25.92■■□□□ 1.74
ROM1-201ENST00000278833 ZNF560Q96MR9 790 aa25.92■■□□□ 1.74
ROM1-201ENST00000278833 SIRPGQ9P1W8 387 aa25.92■■□□□ 1.74
ROM1-201ENST00000278833 PCDHA11Q9Y5I1 949 aa25.92■■□□□ 1.74
ROM1-201ENST00000278833 RFPL1O75677 317 aa25.91■■□□□ 1.74
ROM1-201ENST00000278833 DGKIO75912 1065 aa25.91■■□□□ 1.74
ROM1-201ENST00000278833 HAUS5O94927 633 aa25.91■■□□□ 1.74
ROM1-201ENST00000278833 APRTP07741 180 aa25.91■■□□□ 1.74
ROM1-201ENST00000278833 FDFT1P37268 417 aa25.91■■□□□ 1.74
ROM1-201ENST00000278833 PNPLA4P41247 253 aa25.91■■□□□ 1.74
ROM1-201ENST00000278833 IRF5Q13568 498 aa25.91■■□□□ 1.74
ROM1-201ENST00000278833 DGKDQ16760 1214 aa25.91■■□□□ 1.74
ROM1-201ENST00000278833 ACCSLQ4AC99 568 aa25.91■■□□□ 1.74
ROM1-201ENST00000278833 STXBP5Q5T5C0 1151 aa25.91■■□□□ 1.74
ROM1-201ENST00000278833 BZW1Q7L1Q6 419 aaKnown RBP25.91■■□□□ 1.74
ROM1-201ENST00000278833 MTDHQ86UE4 582 aaKnown RBP25.91■■□□□ 1.74
ROM1-201ENST00000278833 CCDC110Q8TBZ0 833 aa25.91■■□□□ 1.74
ROM1-201ENST00000278833 KBTBD7Q8WVZ9 684 aa25.91■■□□□ 1.74
ROM1-201ENST00000278833 CSPG4P5Q96PW8 444 aa25.91■■□□□ 1.74
ROM1-201ENST00000278833 RNPEPL1Q9HAU8 725 aa25.91■■□□□ 1.74
ROM1-201ENST00000278833 WDR91A4D1P6 747 aa25.91■■□□□ 1.74
ROM1-201ENST00000278833 HGSO14964 777 aaPredicted RBP25.91■■□□□ 1.74
ROM1-201ENST00000278833 GCLCP48506 637 aaPredicted RBP25.91■■□□□ 1.74
ROM1-201ENST00000278833 SLC8A3P57103 927 aa25.91■■□□□ 1.74
ROM1-201ENST00000278833 MTM1Q13496 603 aa25.91■■□□□ 1.74
ROM1-201ENST00000278833 KCTD15Q96SI1 283 aaPredicted RBP25.91■■□□□ 1.74
ROM1-201ENST00000278833 IQCGQ9H095 443 aaKnown RBP25.91■■□□□ 1.74
ROM1-201ENST00000278833 SMYD2Q9NRG4 433 aa25.91■■□□□ 1.74
ROM1-201ENST00000278833 C11orf97A0A1B0GVM6 126 aaPredicted RBP25.9■■□□□ 1.74
ROM1-201ENST00000278833 SMIM35A0A1B0GVV1 85 aa25.9■■□□□ 1.74
ROM1-201ENST00000278833 CXorf49A8MYA2 514 aaPredicted RBP25.9■■□□□ 1.74
ROM1-201ENST00000278833 PEX11AO75192 247 aa25.9■■□□□ 1.74
ROM1-201ENST00000278833 METTL18O95568 372 aa25.9■■□□□ 1.74
ROM1-201ENST00000278833 NAB1Q13506 487 aa25.9■■□□□ 1.74
ROM1-201ENST00000278833 NCBP2-AS2Q69YL0 99 aa25.9■■□□□ 1.74
ROM1-201ENST00000278833 MAB21L3Q8N8X9 362 aa25.9■■□□□ 1.74
ROM1-201ENST00000278833 OR6B3Q8NGW1 331 aa25.9■■□□□ 1.74
ROM1-201ENST00000278833 RSRC1Q96IZ7 334 aaKnown RBP25.9■■□□□ 1.74
ROM1-201ENST00000278833 C12orf65Q9H3J6 166 aaKnown RBP25.9■■□□□ 1.74
ROM1-201ENST00000278833 MBLAC1A4D2B0 266 aaPredicted RBP25.89■■□□□ 1.74
ROM1-201ENST00000278833 A8MXQ7 604 aa25.89■■□□□ 1.74
ROM1-201ENST00000278833 BIRC5O15392 142 aa25.89■■□□□ 1.74
ROM1-201ENST00000278833 XPOTO43592 962 aaKnown RBP25.89■■□□□ 1.74
ROM1-201ENST00000278833 CCDC22O60826 627 aa25.89■■□□□ 1.74
ROM1-201ENST00000278833 ALDH1A2O94788 518 aa25.89■■□□□ 1.74
ROM1-201ENST00000278833 CBX6O95503 412 aa25.89■■□□□ 1.74
ROM1-201ENST00000278833 KCNE1P15382 129 aa25.89■■□□□ 1.74
ROM1-201ENST00000278833 SMPD1P17405 629 aa25.89■■□□□ 1.74
ROM1-201ENST00000278833 BGNP21810 368 aa25.89■■□□□ 1.74
ROM1-201ENST00000278833 SARNPP82979 210 aaKnown RBP25.89■■□□□ 1.74
ROM1-201ENST00000278833 GBE1Q04446 702 aa25.89■■□□□ 1.74
ROM1-201ENST00000278833 SLC10A2Q12908 348 aaPredicted RBP25.89■■□□□ 1.74
ROM1-201ENST00000278833 EFHC1Q5JVL4 640 aa25.89■■□□□ 1.74
ROM1-201ENST00000278833 FBXO47Q5MNV8 452 aa25.89■■□□□ 1.74
ROM1-201ENST00000278833 ATG16L1Q676U5 607 aa25.89■■□□□ 1.74
ROM1-201ENST00000278833 MARK2Q7KZI7 788 aaKnown RBP25.89■■□□□ 1.74
ROM1-201ENST00000278833 CATSPER4Q7RTX7 472 aa25.89■■□□□ 1.74
ROM1-201ENST00000278833 BNIPLQ7Z465 357 aa25.89■■□□□ 1.74
ROM1-201ENST00000278833 NSMCE1Q8WV22 266 aa25.89■■□□□ 1.74
ROM1-201ENST00000278833 TTC17Q96AE7 1141 aa25.89■■□□□ 1.74
ROM1-201ENST00000278833 TMEM120AQ9BXJ8 343 aa25.89■■□□□ 1.74
ROM1-201ENST00000278833 B3GNT5Q9BYG0 378 aa25.89■■□□□ 1.74
ROM1-201ENST00000278833 CXCL16Q9H2A7 254 aa25.89■■□□□ 1.74
ROM1-201ENST00000278833 KCNK4Q9NYG8 393 aa25.89■■□□□ 1.74
ROM1-201ENST00000278833 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP25.89■■□□□ 1.74
ROM1-201ENST00000278833 MOCS1Q9NZB8 636 aa25.89■■□□□ 1.74
ROM1-201ENST00000278833 NUMBLQ9Y6R0 609 aa25.89■■□□□ 1.74
ROM1-201ENST00000278833 FAM163BP0C2L3 166 aa25.89■■□□□ 1.73
ROM1-201ENST00000278833 CRHR1P34998 444 aa25.89■■□□□ 1.73
ROM1-201ENST00000278833 MRPS5P82675 430 aaKnown RBP25.89■■□□□ 1.73
ROM1-201ENST00000278833 GRB14Q14449 540 aa25.89■■□□□ 1.73
ROM1-201ENST00000278833 CMPK2Q5EBM0 449 aa25.89■■□□□ 1.73
ROM1-201ENST00000278833 PPP6R3Q5H9R7 873 aaPredicted RBP25.89■■□□□ 1.73
ROM1-201ENST00000278833 FAXCQ5TGI0 409 aa25.89■■□□□ 1.73
ROM1-201ENST00000278833 IQSEC1Q6DN90 963 aa25.89■■□□□ 1.73
ROM1-201ENST00000278833 KCNT2Q6UVM3 1135 aa25.89■■□□□ 1.73
ROM1-201ENST00000278833 LONP2Q86WA8 852 aa25.89■■□□□ 1.73
ROM1-201ENST00000278833 CCNJLQ8IV13 435 aa25.89■■□□□ 1.73
ROM1-201ENST00000278833 CTAGE3PQ8IX95 158 aa25.89■■□□□ 1.73
ROM1-201ENST00000278833 OR6J1Q8NGC5 347 aa25.89■■□□□ 1.73
ROM1-201ENST00000278833 EIF2AQ9BY44 585 aaKnown RBP25.89■■□□□ 1.73
ROM1-201ENST00000278833 DHX35Q9H5Z1 703 aaKnown RBP25.89■■□□□ 1.73
ROM1-201ENST00000278833 HEY2Q9UBP5 337 aa25.89■■□□□ 1.73
ROM1-201ENST00000278833 A0A0A0MRY4 1105 aa25.88■■□□□ 1.73
ROM1-201ENST00000278833 DAB1O75553 588 aa25.88■■□□□ 1.73
ROM1-201ENST00000278833 LMNAP02545 664 aaKnown RBP25.88■■□□□ 1.73
ROM1-201ENST00000278833 CSH1P0DML2 217 aa25.88■■□□□ 1.73
ROM1-201ENST00000278833 CSH2P0DML3 217 aa25.88■■□□□ 1.73
ROM1-201ENST00000278833 HSPA8P11142 646 aaKnown RBP25.88■■□□□ 1.73
ROM1-201ENST00000278833 DARSP14868 501 aaKnown RBP25.88■■□□□ 1.73
ROM1-201ENST00000278833 TFE3P19532 575 aaPredicted RBP25.88■■□□□ 1.73
ROM1-201ENST00000278833 CALB2P22676 271 aa25.88■■□□□ 1.73
ROM1-201ENST00000278833 ZNF449Q6P9G9 518 aa25.88■■□□□ 1.73
ROM1-201ENST00000278833 CDHR3Q6ZTQ4 885 aa25.88■■□□□ 1.73
ROM1-201ENST00000278833 ACMSDQ8TDX5 336 aa25.88■■□□□ 1.73
ROM1-201ENST00000278833 SPATA13Q96N96 652 aa25.88■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms