RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 BADQ92934 168 aa18.82■□□□□ 0.6
VIM-201ENST00000224237 TMEM169Q96HH4 297 aa18.82■□□□□ 0.6
VIM-201ENST00000224237 MAGEB5Q9BZ81 275 aa18.82■□□□□ 0.6
VIM-201ENST00000224237 WDCPQ9H6R7 721 aa18.82■□□□□ 0.6
VIM-201ENST00000224237 IL37Q9NZH6 218 aa18.82■□□□□ 0.6
VIM-201ENST00000224237 RTN3O95197 1032 aaPredicted RBP18.81■□□□□ 0.6
VIM-201ENST00000224237 STIP1P31948 543 aaKnown RBP18.81■□□□□ 0.6
VIM-201ENST00000224237 ITGA8P53708 1063 aa18.81■□□□□ 0.6
VIM-201ENST00000224237 FAM193AP78312 1265 aa18.81■□□□□ 0.6
VIM-201ENST00000224237 P3H1Q32P28 736 aa18.81■□□□□ 0.6
VIM-201ENST00000224237 RHBDF2Q6PJF5 856 aa18.81■□□□□ 0.6
VIM-201ENST00000224237 SLC39A11Q8N1S5 342 aa18.81■□□□□ 0.6
VIM-201ENST00000224237 SPATA17Q96L03 361 aa18.81■□□□□ 0.6
VIM-201ENST00000224237 SEPT5Q99719 369 aaPredicted RBP18.81■□□□□ 0.6
VIM-201ENST00000224237 TXLNGYQ9BZA5 131 aa18.81■□□□□ 0.6
VIM-201ENST00000224237 TSPYL1Q9H0U9 437 aa18.81■□□□□ 0.6
VIM-201ENST00000224237 SMOC2Q9H3U7 446 aa18.81■□□□□ 0.6
VIM-201ENST00000224237 TMEM51Q9NW97 253 aa18.81■□□□□ 0.6
VIM-201ENST00000224237 HEY1Q9Y5J3 304 aa18.81■□□□□ 0.6
VIM-201ENST00000224237 MRPL42Q9Y6G3 142 aaKnown RBP18.81■□□□□ 0.6
VIM-201ENST00000224237 FAM92AA1XBS5 289 aa18.8■□□□□ 0.6
VIM-201ENST00000224237 ZBBXA8MT70 800 aa18.8■□□□□ 0.6
VIM-201ENST00000224237 IRAK2O43187 625 aa18.8■□□□□ 0.6
VIM-201ENST00000224237 VNN2O95498 520 aa18.8■□□□□ 0.6
VIM-201ENST00000224237 HAPLN1P10915 354 aaPredicted RBP18.8■□□□□ 0.6
VIM-201ENST00000224237 HSD17B3P37058 310 aa18.8■□□□□ 0.6
VIM-201ENST00000224237 ZNF135P52742 658 aaPredicted RBP18.8■□□□□ 0.6
VIM-201ENST00000224237 SLMAPQ14BN4 828 aa18.8■□□□□ 0.6
VIM-201ENST00000224237 IZUMO3Q5VZ72 239 aa18.8■□□□□ 0.6
VIM-201ENST00000224237 SCD5Q86SK9 330 aa18.8■□□□□ 0.6
VIM-201ENST00000224237 PRUNE1Q86TP1 453 aa18.8■□□□□ 0.6
VIM-201ENST00000224237 ZC3H18Q86VM9 953 aaKnown RBP18.8■□□□□ 0.6
VIM-201ENST00000224237 IQCKQ8N0W5 287 aa18.8■□□□□ 0.6
VIM-201ENST00000224237 YME1L1Q96TA2 773 aa18.8■□□□□ 0.6
VIM-201ENST00000224237 PRDM10Q9NQV6 1147 aa18.8■□□□□ 0.6
VIM-201ENST00000224237 TMPRSS4Q9NRS4 437 aa18.8■□□□□ 0.6
VIM-201ENST00000224237 COMMD8Q9NX08 183 aa18.8■□□□□ 0.6
VIM-201ENST00000224237 ANAPC5Q9UJX4 755 aa18.8■□□□□ 0.6
VIM-201ENST00000224237 ATP8A1Q9Y2Q0 1164 aa18.8■□□□□ 0.6
VIM-201ENST00000224237 A0A1W2PQH9 124 aa18.8■□□□□ 0.6
VIM-201ENST00000224237 WDR27A2RRH5 827 aa18.8■□□□□ 0.6
VIM-201ENST00000224237 CFAP69A5D8W1 941 aa18.8■□□□□ 0.6
VIM-201ENST00000224237 H7C0C1 242 aa18.8■□□□□ 0.6
VIM-201ENST00000224237 AGPSO00116 658 aa18.8■□□□□ 0.6
VIM-201ENST00000224237 DNALI1O14645 258 aaPredicted RBP18.8■□□□□ 0.6
VIM-201ENST00000224237 SOAT2O75908 522 aa18.8■□□□□ 0.6
VIM-201ENST00000224237 ZSCAN5DPP0CG00 497 aa18.8■□□□□ 0.6
VIM-201ENST00000224237 GGCXP38435 758 aa18.8■□□□□ 0.6
VIM-201ENST00000224237 ATP5OP48047 213 aa18.8■□□□□ 0.6
VIM-201ENST00000224237 GDF10P55107 478 aa18.8■□□□□ 0.6
VIM-201ENST00000224237 RPL10AP62906 217 aaKnown RBP18.8■□□□□ 0.6
VIM-201ENST00000224237 GPS1Q13098 491 aa18.8■□□□□ 0.6
VIM-201ENST00000224237 DUSP4Q13115 394 aa18.8■□□□□ 0.6
VIM-201ENST00000224237 EIF4EBP2Q13542 120 aaPredicted RBP18.8■□□□□ 0.6
VIM-201ENST00000224237 NCBP2-AS2Q69YL0 99 aa18.8■□□□□ 0.6
VIM-201ENST00000224237 DARS2Q6PI48 645 aaKnown RBP18.8■□□□□ 0.6
VIM-201ENST00000224237 C7orf61Q8IZ16 206 aa18.8■□□□□ 0.6
VIM-201ENST00000224237 UBLCP1Q8WVY7 318 aaPredicted RBP18.8■□□□□ 0.6
VIM-201ENST00000224237 ZIM3Q96PE6 472 aa18.8■□□□□ 0.6
VIM-201ENST00000224237 TKTL2Q9H0I9 626 aa18.8■□□□□ 0.6
VIM-201ENST00000224237 CRISPLD1Q9H336 500 aa18.8■□□□□ 0.6
VIM-201ENST00000224237 NMUR1Q9HB89 426 aa18.8■□□□□ 0.6
VIM-201ENST00000224237 ARHGEF4Q9NR80 690 aa18.8■□□□□ 0.6
VIM-201ENST00000224237 PRKAG2Q9UGJ0 569 aa18.8■□□□□ 0.6
VIM-201ENST00000224237 SLC27A5Q9Y2P5 690 aa18.8■□□□□ 0.6
VIM-201ENST00000224237 EEF2KO00418 725 aaKnown RBP18.79■□□□□ 0.6
VIM-201ENST00000224237 ADAM12O43184 909 aa18.79■□□□□ 0.6
VIM-201ENST00000224237 CREB3O43889 395 aa18.79■□□□□ 0.6
VIM-201ENST00000224237 ETS1P14921 441 aa18.79■□□□□ 0.6
VIM-201ENST00000224237 RPL17P18621 184 aaKnown RBP18.79■□□□□ 0.6
VIM-201ENST00000224237 AMPD1P23109 780 aa18.79■□□□□ 0.6
VIM-201ENST00000224237 YWHAQP27348 245 aa18.79■□□□□ 0.6
VIM-201ENST00000224237 USP46P62068 366 aa18.79■□□□□ 0.6
VIM-201ENST00000224237 SEMA3BQ13214 749 aa18.79■□□□□ 0.6
VIM-201ENST00000224237 XRCC4Q13426 336 aa18.79■□□□□ 0.6
VIM-201ENST00000224237 UAP1Q16222 522 aaPredicted RBP18.79■□□□□ 0.6
VIM-201ENST00000224237 HIBCHQ6NVY1 386 aaPredicted RBP18.79■□□□□ 0.6
VIM-201ENST00000224237 BZW1Q7L1Q6 419 aaKnown RBP18.79■□□□□ 0.6
VIM-201ENST00000224237 UNC45BQ8IWX7 931 aa18.79■□□□□ 0.6
VIM-201ENST00000224237 COLGALT1Q8NBJ5 622 aa18.79■□□□□ 0.6
VIM-201ENST00000224237 CEP295NLQ96MC4 621 aa18.79■□□□□ 0.6
VIM-201ENST00000224237 HERC2P3Q9BVR0 1158 aa18.79■□□□□ 0.6
VIM-201ENST00000224237 ANLNQ9NQW6 1124 aa18.79■□□□□ 0.6
VIM-201ENST00000224237 C2CD2LO14523 706 aa18.78■□□□□ 0.6
VIM-201ENST00000224237 OAS2P29728 719 aaKnown RBP18.78■□□□□ 0.6
VIM-201ENST00000224237 OR1D2P34982 312 aa18.78■□□□□ 0.6
VIM-201ENST00000224237 PSEN1P49768 467 aa18.78■□□□□ 0.6
VIM-201ENST00000224237 PMS2P54278 862 aa18.78■□□□□ 0.6
VIM-201ENST00000224237 DSG1Q02413 1049 aa18.78■□□□□ 0.6
VIM-201ENST00000224237 PPIGQ13427 754 aaKnown RBP eCLIP18.78■□□□□ 0.6
VIM-201ENST00000224237 BRMS1LQ5PSV4 323 aa18.78■□□□□ 0.6
VIM-201ENST00000224237 RFX8Q6ZV50 586 aa18.78■□□□□ 0.6
VIM-201ENST00000224237 PCGF5Q86SE9 256 aa18.78■□□□□ 0.6
VIM-201ENST00000224237 FAM71DQ8N9W8 422 aa18.78■□□□□ 0.6
VIM-201ENST00000224237 RNF34Q969K3 372 aa18.78■□□□□ 0.6
VIM-201ENST00000224237 C10orf88Q9H8K7 445 aa18.78■□□□□ 0.6
VIM-201ENST00000224237 SPG21Q9NZD8 308 aa18.78■□□□□ 0.6
VIM-201ENST00000224237 CXXC1Q9P0U4 656 aaPredicted RBP18.78■□□□□ 0.6
VIM-201ENST00000224237 TPX2Q9ULW0 747 aaKnown RBP18.78■□□□□ 0.6
VIM-201ENST00000224237 BCLAF3A2AJT9 711 aaKnown RBP18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms