RNA–Protein interactions for RNA: ENST00000636389.1

CACNA1A-225, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 8,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-225ENST00000636389 EXTL3O43909 919 aa17.99■□□□□ 0.47
CACNA1A-225ENST00000636389 KPNA6O60684 536 aa17.99■□□□□ 0.47
CACNA1A-225ENST00000636389 VPS4BO75351 444 aa17.99■□□□□ 0.47
CACNA1A-225ENST00000636389 EYA4O95677 639 aa17.99■□□□□ 0.47
CACNA1A-225ENST00000636389 FMO5P49326 533 aa17.99■□□□□ 0.47
CACNA1A-225ENST00000636389 CLK3P49761 638 aaKnown RBP17.99■□□□□ 0.47
CACNA1A-225ENST00000636389 EIF2B2P49770 351 aaKnown RBP17.99■□□□□ 0.47
CACNA1A-225ENST00000636389 MTAPQ13126 283 aa17.99■□□□□ 0.47
CACNA1A-225ENST00000636389 PTAR1Q7Z6K3 402 aaPredicted RBP17.99■□□□□ 0.47
CACNA1A-225ENST00000636389 RACGAP1Q9H0H5 632 aa17.99■□□□□ 0.47
CACNA1A-225ENST00000636389 ZNF232Q9UNY5 417 aa17.99■□□□□ 0.47
CACNA1A-225ENST00000636389 AMD1P17707 334 aa17.99■□□□□ 0.47
CACNA1A-225ENST00000636389 TAF6P49848 677 aa17.99■□□□□ 0.47
CACNA1A-225ENST00000636389 XKR3Q5GH77 459 aa17.99■□□□□ 0.47
CACNA1A-225ENST00000636389 SEL1L3Q68CR1 1132 aa17.99■□□□□ 0.47
CACNA1A-225ENST00000636389 PPIL6Q8IXY8 311 aa17.99■□□□□ 0.47
CACNA1A-225ENST00000636389 FAM9CQ8IZT9 166 aa17.99■□□□□ 0.47
CACNA1A-225ENST00000636389 CHKBQ9Y259 395 aa17.99■□□□□ 0.47
CACNA1A-225ENST00000636389 STXBP1P61764 594 aaKnown RBP17.98■□□□□ 0.47
CACNA1A-225ENST00000636389 ATP1A4Q13733 1029 aa17.98■□□□□ 0.47
CACNA1A-225ENST00000636389 UBE2OQ9C0C9 1292 aaKnown RBP17.98■□□□□ 0.47
CACNA1A-225ENST00000636389 TMEM114B3SHH9 223 aa17.98■□□□□ 0.47
CACNA1A-225ENST00000636389 PRG2P13727 222 aa17.98■□□□□ 0.47
CACNA1A-225ENST00000636389 FDFT1P37268 417 aa17.98■□□□□ 0.47
CACNA1A-225ENST00000636389 GRM4Q14833 912 aa17.98■□□□□ 0.47
CACNA1A-225ENST00000636389 DAPK2Q9UIK4 370 aa17.98■□□□□ 0.47
CACNA1A-225ENST00000636389 HPCAL1P37235 193 aa17.98■□□□□ 0.47
CACNA1A-225ENST00000636389 GEMP55040 296 aa17.98■□□□□ 0.47
CACNA1A-225ENST00000636389 ARSJQ5FYB0 599 aaPredicted RBP17.98■□□□□ 0.47
CACNA1A-225ENST00000636389 PTPN3P26045 913 aa17.98■□□□□ 0.47
CACNA1A-225ENST00000636389 EN1Q05925 392 aaPredicted RBP17.98■□□□□ 0.47
CACNA1A-225ENST00000636389 ITGALP20701 1170 aa17.98■□□□□ 0.47
CACNA1A-225ENST00000636389 HUNKP57058 714 aa17.98■□□□□ 0.47
CACNA1A-225ENST00000636389 SPIDRQ14159 915 aa17.98■□□□□ 0.47
CACNA1A-225ENST00000636389 SETMARQ53H47 684 aaPredicted RBP17.98■□□□□ 0.47
CACNA1A-225ENST00000636389 ZNF579Q8NAF0 562 aaKnown RBP17.98■□□□□ 0.47
CACNA1A-225ENST00000636389 FAM111AQ96PZ2 611 aa17.98■□□□□ 0.47
CACNA1A-225ENST00000636389 CNPPD1Q9BV87 410 aa17.98■□□□□ 0.47
CACNA1A-225ENST00000636389 SUCOQ9UBS9 1254 aaKnown RBP17.98■□□□□ 0.47
CACNA1A-225ENST00000636389 HLFQ16534 295 aa17.98■□□□□ 0.47
CACNA1A-225ENST00000636389 STRA8Q7Z7C7 330 aa17.98■□□□□ 0.47
CACNA1A-225ENST00000636389 C1orf232A0A0U1RR37 186 aa17.97■□□□□ 0.47
CACNA1A-225ENST00000636389 A0A1W2PRG6 482 aa17.97■□□□□ 0.47
CACNA1A-225ENST00000636389 SPAG6O75602 509 aa17.97■□□□□ 0.47
CACNA1A-225ENST00000636389 ZCWPW2Q504Y3 356 aa17.97■□□□□ 0.47
CACNA1A-225ENST00000636389 ZNF354BQ96LW1 612 aa17.97■□□□□ 0.47
CACNA1A-225ENST00000636389 TEX13BQ9BXU2 312 aa17.97■□□□□ 0.47
CACNA1A-225ENST00000636389 BTN3A3O00478 584 aa17.97■□□□□ 0.47
CACNA1A-225ENST00000636389 MPOP05164 745 aa17.97■□□□□ 0.47
CACNA1A-225ENST00000636389 SCARF1Q14162 830 aa17.97■□□□□ 0.47
CACNA1A-225ENST00000636389 OTUD3Q5T2D3 398 aaPredicted RBP17.97■□□□□ 0.47
CACNA1A-225ENST00000636389 ITIH5Q86UX2 942 aa17.97■□□□□ 0.47
CACNA1A-225ENST00000636389 PIGKQ92643 395 aa17.97■□□□□ 0.47
CACNA1A-225ENST00000636389 TMEM159Q96B96 161 aa17.97■□□□□ 0.47
CACNA1A-225ENST00000636389 ALKBH4Q9NXW9 302 aa17.97■□□□□ 0.47
CACNA1A-225ENST00000636389 OR10H2O60403 315 aa17.97■□□□□ 0.47
CACNA1A-225ENST00000636389 CTXN3Q4LDR2 81 aa17.97■□□□□ 0.47
CACNA1A-225ENST00000636389 TMC7Q7Z402 723 aa17.97■□□□□ 0.47
CACNA1A-225ENST00000636389 KLHL23Q8NBE8 558 aa17.97■□□□□ 0.47
CACNA1A-225ENST00000636389 CPDO75976 1380 aa17.97■□□□□ 0.47
CACNA1A-225ENST00000636389 ANO9A1A5B4 782 aa17.97■□□□□ 0.47
CACNA1A-225ENST00000636389 CHRNA5P30532 468 aa17.97■□□□□ 0.47
CACNA1A-225ENST00000636389 KCNT1Q5JUK3 1230 aa17.97■□□□□ 0.47
CACNA1A-225ENST00000636389 PROX1Q92786 737 aa17.97■□□□□ 0.47
CACNA1A-225ENST00000636389 PHF21BQ96EK2 531 aa17.97■□□□□ 0.47
CACNA1A-225ENST00000636389 EFCAB1Q9HAE3 211 aa17.97■□□□□ 0.47
CACNA1A-225ENST00000636389 PCDHB9Q9Y5E1 797 aa17.97■□□□□ 0.47
CACNA1A-225ENST00000636389 PBRM1Q86U86 1689 aa17.97■□□□□ 0.47
CACNA1A-225ENST00000636389 CCDC154A6NI56 674 aa17.97■□□□□ 0.47
CACNA1A-225ENST00000636389 SSNA1O43805 119 aa17.97■□□□□ 0.47
CACNA1A-225ENST00000636389 IRX1P78414 480 aaPredicted RBP17.97■□□□□ 0.47
CACNA1A-225ENST00000636389 OVGP1Q12889 678 aa17.97■□□□□ 0.47
CACNA1A-225ENST00000636389 MCOLN3Q8TDD5 553 aa17.97■□□□□ 0.47
CACNA1A-225ENST00000636389 GAL3ST3Q96A11 431 aa17.97■□□□□ 0.47
CACNA1A-225ENST00000636389 UBP1Q9NZI7 540 aa17.97■□□□□ 0.47
CACNA1A-225ENST00000636389 PVALEFA0A1B0GWK0 134 aa17.97■□□□□ 0.47
CACNA1A-225ENST00000636389 TM9SF1O15321 606 aa17.97■□□□□ 0.47
CACNA1A-225ENST00000636389 ZCCHC18P0CG32 403 aa17.97■□□□□ 0.47
CACNA1A-225ENST00000636389 ACO1P21399 889 aaKnown RBP17.97■□□□□ 0.47
CACNA1A-225ENST00000636389 ARID3BQ8IVW6 561 aaPredicted RBP17.97■□□□□ 0.47
CACNA1A-225ENST00000636389 NRDE2Q9H7Z3 1164 aa17.97■□□□□ 0.47
CACNA1A-225ENST00000636389 LY9Q9HBG7 655 aa17.97■□□□□ 0.47
CACNA1A-225ENST00000636389 ANKARQ7Z5J8 1434 aa17.96■□□□□ 0.47
CACNA1A-225ENST00000636389 TRIM49D1C9J1S8 452 aa17.96■□□□□ 0.47
CACNA1A-225ENST00000636389 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.96■□□□□ 0.47
CACNA1A-225ENST00000636389 FDX1P10109 184 aa17.96■□□□□ 0.47
CACNA1A-225ENST00000636389 ANGEL2Q5VTE6 544 aaKnown RBP17.96■□□□□ 0.47
CACNA1A-225ENST00000636389 CCT8L2Q96SF2 557 aa17.96■□□□□ 0.47
CACNA1A-225ENST00000636389 ADGRA3Q8IWK6 1321 aa17.96■□□□□ 0.47
CACNA1A-225ENST00000636389 CYB561D2O14569 222 aa17.96■□□□□ 0.47
CACNA1A-225ENST00000636389 TSPAN3O60637 253 aa17.96■□□□□ 0.47
CACNA1A-225ENST00000636389 GPR15P49685 360 aa17.96■□□□□ 0.47
CACNA1A-225ENST00000636389 SLFN11Q7Z7L1 901 aa17.96■□□□□ 0.47
CACNA1A-225ENST00000636389 PSMD11O00231 422 aa17.96■□□□□ 0.47
CACNA1A-225ENST00000636389 GRB14Q14449 540 aa17.96■□□□□ 0.47
CACNA1A-225ENST00000636389 SYNPO2Q9UMS6 1093 aa17.96■□□□□ 0.47
CACNA1A-225ENST00000636389 IGF2BP3O00425 579 aaKnown RBP eCLIP17.96■□□□□ 0.47
CACNA1A-225ENST00000636389 KIAA0391O15091 583 aaKnown RBP17.96■□□□□ 0.47
CACNA1A-225ENST00000636389 PNPLA4P41247 253 aa17.96■□□□□ 0.47
CACNA1A-225ENST00000636389 DNAJC3Q13217 504 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms