RNA–Protein interactions for RNA: ENST00000635120.1

CSMD1-218, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene CSMD1, Length 11,737 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-218ENST00000635120 STK39Q9UEW8 545 aa9.36□□□□□ -0.91
CSMD1-218ENST00000635120 KANSL1LA0AUZ9 987 aa9.36□□□□□ -0.91
CSMD1-218ENST00000635120 ATP9AO75110 1047 aa9.36□□□□□ -0.91
CSMD1-218ENST00000635120 FYNP06241 537 aa9.36□□□□□ -0.91
CSMD1-218ENST00000635120 FAM58BPP0C7Q3 252 aa9.36□□□□□ -0.91
CSMD1-218ENST00000635120 VCLP18206 1134 aa9.36□□□□□ -0.91
CSMD1-218ENST00000635120 ALDH9A1P49189 494 aa9.36□□□□□ -0.91
CSMD1-218ENST00000635120 TAF6P49848 677 aa9.36□□□□□ -0.91
CSMD1-218ENST00000635120 SPANXN2Q5MJ10 180 aa9.36□□□□□ -0.91
CSMD1-218ENST00000635120 TYW3Q6IPR3 259 aaKnown RBP9.36□□□□□ -0.91
CSMD1-218ENST00000635120 SLC22A9Q8IVM8 553 aa9.36□□□□□ -0.91
CSMD1-218ENST00000635120 POP1Q99575 1024 aaKnown RBP9.36□□□□□ -0.91
CSMD1-218ENST00000635120 DCUN1D5Q9BTE7 237 aa9.36□□□□□ -0.91
CSMD1-218ENST00000635120 ETAA1Q9NY74 926 aa9.36□□□□□ -0.91
CSMD1-218ENST00000635120 NCKIPSDQ9NZQ3 722 aa9.36□□□□□ -0.91
CSMD1-218ENST00000635120 DUSP12Q9UNI6 340 aa9.36□□□□□ -0.91
CSMD1-218ENST00000635120 ERVK-10P10266 1014 aa9.36□□□□□ -0.91
CSMD1-218ENST00000635120 RAG1P15918 1043 aa9.36□□□□□ -0.91
CSMD1-218ENST00000635120 RIPOR1Q6ZS17 1223 aa9.36□□□□□ -0.91
CSMD1-218ENST00000635120 TMEM26Q6ZUK4 368 aa9.36□□□□□ -0.91
CSMD1-218ENST00000635120 COMMD2Q86X83 199 aa9.36□□□□□ -0.91
CSMD1-218ENST00000635120 ZSCAN18Q8TBC5 510 aaPredicted RBP9.36□□□□□ -0.91
CSMD1-218ENST00000635120 UBP1Q9NZI7 540 aa9.36□□□□□ -0.91
CSMD1-218ENST00000635120 CNOT7Q9UIV1 285 aaKnown RBP9.36□□□□□ -0.91
CSMD1-218ENST00000635120 FAM47E-STBD1D6RA91 191 aa9.36□□□□□ -0.91
CSMD1-218ENST00000635120 LRG1P02750 347 aa9.36□□□□□ -0.91
CSMD1-218ENST00000635120 CPT1AP50416 773 aa9.36□□□□□ -0.91
CSMD1-218ENST00000635120 OTUD3Q5T2D3 398 aaPredicted RBP9.36□□□□□ -0.91
CSMD1-218ENST00000635120 CDC42EP5Q6NZY7 148 aa9.36□□□□□ -0.91
CSMD1-218ENST00000635120 FUT8Q9BYC5 575 aa9.36□□□□□ -0.91
CSMD1-218ENST00000635120 SCAF8Q9UPN6 1271 aaKnown RBP9.36□□□□□ -0.91
CSMD1-218ENST00000635120 PIK3CDO00329 1044 aa9.36□□□□□ -0.91
CSMD1-218ENST00000635120 RBP1P09455 135 aa9.36□□□□□ -0.91
CSMD1-218ENST00000635120 YWHAQP27348 245 aa9.36□□□□□ -0.91
CSMD1-218ENST00000635120 PIK3R1P27986 724 aa9.36□□□□□ -0.91
CSMD1-218ENST00000635120 SLC1A6P48664 564 aa9.36□□□□□ -0.91
CSMD1-218ENST00000635120 ALDH7A1P49419 539 aaKnown RBP9.36□□□□□ -0.91
CSMD1-218ENST00000635120 TAF1CQ15572 869 aaPredicted RBP9.36□□□□□ -0.91
CSMD1-218ENST00000635120 DNAJC14Q6Y2X3 702 aaPredicted RBP9.36□□□□□ -0.91
CSMD1-218ENST00000635120 TBC1D16Q8TBP0 767 aa9.36□□□□□ -0.91
CSMD1-218ENST00000635120 KIFC1Q9BW19 673 aa9.36□□□□□ -0.91
CSMD1-218ENST00000635120 AVENQ9NQS1 362 aaPredicted RBP9.36□□□□□ -0.91
CSMD1-218ENST00000635120 KLHL1Q9NR64 748 aa9.36□□□□□ -0.91
CSMD1-218ENST00000635120 ANKEF1Q9NU02 776 aa9.36□□□□□ -0.91
CSMD1-218ENST00000635120 CRB1P82279 1406 aa9.35□□□□□ -0.91
CSMD1-218ENST00000635120 ANTXR2P58335 489 aa9.35□□□□□ -0.91
CSMD1-218ENST00000635120 CCDC157Q569K6 752 aa9.35□□□□□ -0.91
CSMD1-218ENST00000635120 N4BP2L1Q5TBK1 243 aaPredicted RBP9.35□□□□□ -0.91
CSMD1-218ENST00000635120 EVPLQ92817 2033 aa9.35□□□□□ -0.91
CSMD1-218ENST00000635120 MIEF1Q9NQG6 463 aa9.35□□□□□ -0.91
CSMD1-218ENST00000635120 KLHL3Q9UH77 587 aa9.35□□□□□ -0.91
CSMD1-218ENST00000635120 CAPN6Q9Y6Q1 641 aa9.35□□□□□ -0.91
CSMD1-218ENST00000635120 F8VZ95 297 aa9.35□□□□□ -0.91
CSMD1-218ENST00000635120 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.35□□□□□ -0.91
CSMD1-218ENST00000635120 ZNRF3Q9ULT6 936 aa9.35□□□□□ -0.91
CSMD1-218ENST00000635120 NUP205Q92621 2012 aa9.35□□□□□ -0.91
CSMD1-218ENST00000635120 FGFR3P22607 806 aa9.35□□□□□ -0.91
CSMD1-218ENST00000635120 BCAT1P54687 386 aa9.35□□□□□ -0.91
CSMD1-218ENST00000635120 EFEMP1Q12805 493 aa9.35□□□□□ -0.91
CSMD1-218ENST00000635120 TBCELQ5QJ74 424 aa9.35□□□□□ -0.91
CSMD1-218ENST00000635120 GPRC5AQ8NFJ5 357 aa9.35□□□□□ -0.91
CSMD1-218ENST00000635120 NAT9Q9BTE0 207 aa9.35□□□□□ -0.91
CSMD1-218ENST00000635120 OSGEPL1Q9H4B0 414 aa9.35□□□□□ -0.91
CSMD1-218ENST00000635120 C19orf81C9J6K1 198 aa9.35□□□□□ -0.91
CSMD1-218ENST00000635120 MSH4O15457 936 aa9.35□□□□□ -0.91
CSMD1-218ENST00000635120 ENDOD1O94919 500 aa9.35□□□□□ -0.91
CSMD1-218ENST00000635120 DSG3P32926 999 aa9.35□□□□□ -0.91
CSMD1-218ENST00000635120 RAD23AP54725 363 aa9.35□□□□□ -0.91
CSMD1-218ENST00000635120 OXCT1P55809 520 aa9.35□□□□□ -0.91
CSMD1-218ENST00000635120 POU6F1Q14863 301 aa9.35□□□□□ -0.91
CSMD1-218ENST00000635120 STRIP1Q5VSL9 837 aa9.35□□□□□ -0.91
CSMD1-218ENST00000635120 PRMT9Q6P2P2 845 aa9.35□□□□□ -0.91
CSMD1-218ENST00000635120 C16orf62Q7Z3J2 963 aa9.35□□□□□ -0.91
CSMD1-218ENST00000635120 FAM228AQ86W67 206 aa9.35□□□□□ -0.91
CSMD1-218ENST00000635120 SIX5Q8N196 739 aa9.35□□□□□ -0.91
CSMD1-218ENST00000635120 LRRC40Q9H9A6 602 aa9.35□□□□□ -0.91
CSMD1-218ENST00000635120 DLC1Q96QB1 1528 aa9.35□□□□□ -0.91
CSMD1-218ENST00000635120 RASA1P20936 1047 aa9.35□□□□□ -0.91
CSMD1-218ENST00000635120 CNTFP26441 200 aa9.35□□□□□ -0.91
CSMD1-218ENST00000635120 MAGEA10P43363 369 aaPredicted RBP9.35□□□□□ -0.91
CSMD1-218ENST00000635120 NACC2Q96BF6 587 aa9.35□□□□□ -0.91
CSMD1-218ENST00000635120 ZFRQ96KR1 1074 aaKnown RBP9.35□□□□□ -0.91
CSMD1-218ENST00000635120 BDH2Q9BUT1 245 aa9.35□□□□□ -0.91
CSMD1-218ENST00000635120 ACTR8Q9H981 624 aa9.35□□□□□ -0.91
CSMD1-218ENST00000635120 TMEM165Q9HC07 324 aa9.35□□□□□ -0.91
CSMD1-218ENST00000635120 VPS28Q9UK41 221 aa9.35□□□□□ -0.91
CSMD1-218ENST00000635120 FAM220BPB1ANY3 271 aa9.35□□□□□ -0.91
CSMD1-218ENST00000635120 ATG7O95352 703 aa9.35□□□□□ -0.91
CSMD1-218ENST00000635120 ITGALP20701 1170 aa9.35□□□□□ -0.91
CSMD1-218ENST00000635120 ATP6V1C1P21283 382 aa9.35□□□□□ -0.91
CSMD1-218ENST00000635120 CSHL1Q14406 222 aa9.35□□□□□ -0.91
CSMD1-218ENST00000635120 EPB41L4AQ9HCS5 686 aaPredicted RBP9.35□□□□□ -0.91
CSMD1-218ENST00000635120 SVILO95425 2214 aa9.35□□□□□ -0.91
CSMD1-218ENST00000635120 ABCA9Q8IUA7 1624 aa9.35□□□□□ -0.91
CSMD1-218ENST00000635120 FGFR2P21802 821 aa9.35□□□□□ -0.91
CSMD1-218ENST00000635120 OR6Y1Q8NGX8 325 aa9.35□□□□□ -0.91
CSMD1-218ENST00000635120 TMEM237Q96Q45 408 aa9.35□□□□□ -0.91
CSMD1-218ENST00000635120 ACOX2Q99424 681 aa9.35□□□□□ -0.91
CSMD1-218ENST00000635120 ADGRE3Q9BY15 652 aa9.35□□□□□ -0.91
CSMD1-218ENST00000635120 PRDM4Q9UKN5 801 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms