RNA–Protein interactions for RNA: ENST00000625891.2

NRXN1-223, Transcript of neurexin 1, human

TSL 4 BASIC

Gene NRXN1, Length 1,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NRXN1-223	ENST00000625891	CPT1A	P50416	773 aa		6.64	□□□□□ -1.35
NRXN1-223	ENST00000625891	NXPH1	P58417	271 aa		6.64	□□□□□ -1.35
NRXN1-223	ENST00000625891	SATB1	Q01826	763 aa		6.64	□□□□□ -1.35
NRXN1-223	ENST00000625891	TAP1	Q03518	808 aa		6.64	□□□□□ -1.35
NRXN1-223	ENST00000625891	ARL13B	Q3SXY8	428 aa		6.64	□□□□□ -1.35
NRXN1-223	ENST00000625891	PLAG1	Q6DJT9	500 aa		6.64	□□□□□ -1.35
NRXN1-223	ENST00000625891	LDHAL6A	Q6ZMR3	332 aa		6.64	□□□□□ -1.35
NRXN1-223	ENST00000625891	BEND5	Q7L4P6	421 aa		6.64	□□□□□ -1.35
NRXN1-223	ENST00000625891	DTX2	Q86UW9	622 aa		6.64	□□□□□ -1.35
NRXN1-223	ENST00000625891	UNC5CL	Q8IV45	518 aa		6.64	□□□□□ -1.35
NRXN1-223	ENST00000625891	B3GALNT2	Q8NCR0	500 aa		6.64	□□□□□ -1.35
NRXN1-223	ENST00000625891	IPCEF1	Q8WWN9	437 aa	Predicted RBP	6.64	□□□□□ -1.35
NRXN1-223	ENST00000625891	ATG4A	Q8WYN0	398 aa		6.64	□□□□□ -1.35
NRXN1-223	ENST00000625891	PRAM1	Q96QH2	718 aa		6.64	□□□□□ -1.35
NRXN1-223	ENST00000625891	TTLL2	Q9BWV7	592 aa		6.64	□□□□□ -1.35
NRXN1-223	ENST00000625891	TRIM5	Q9C035	493 aa		6.64	□□□□□ -1.35
NRXN1-223	ENST00000625891	TBC1D23	Q9NUY8	699 aa		6.64	□□□□□ -1.35
NRXN1-223	ENST00000625891	PACSIN3	Q9UKS6	424 aa		6.64	□□□□□ -1.35
NRXN1-223	ENST00000625891	EPN1	Q9Y6I3	576 aa	Predicted RBP	6.64	□□□□□ -1.35
NRXN1-223	ENST00000625891	RPGRIP1L	Q68CZ1	1315 aa		6.64	□□□□□ -1.35
NRXN1-223	ENST00000625891	NPHP3	Q7Z494	1330 aa		6.64	□□□□□ -1.35
NRXN1-223	ENST00000625891	ADGRA2	Q96PE1	1338 aa		6.64	□□□□□ -1.35
NRXN1-223	ENST00000625891	CCDC144A	A2RUR9	1427 aa		6.64	□□□□□ -1.35
NRXN1-223	ENST00000625891	YY2	O15391	372 aa		6.63	□□□□□ -1.35
NRXN1-223	ENST00000625891	KCNQ3	O43525	872 aa		6.63	□□□□□ -1.35
NRXN1-223	ENST00000625891	CSTB	P04080	98 aa	Known RBP	6.63	□□□□□ -1.35
NRXN1-223	ENST00000625891	ERBB2	P04626	1255 aa		6.63	□□□□□ -1.35
NRXN1-223	ENST00000625891	HKR1	P10072	659 aa		6.63	□□□□□ -1.35
NRXN1-223	ENST00000625891	MPL	P40238	635 aa		6.63	□□□□□ -1.35
NRXN1-223	ENST00000625891	FOLR3	P41439	243 aa		6.63	□□□□□ -1.35
NRXN1-223	ENST00000625891	FOXI1	Q12951	378 aa		6.63	□□□□□ -1.35
NRXN1-223	ENST00000625891	GRM1	Q13255	1194 aa		6.63	□□□□□ -1.35
NRXN1-223	ENST00000625891	PTPRR	Q15256	657 aa		6.63	□□□□□ -1.35
NRXN1-223	ENST00000625891	PUM3	Q15397	648 aa	Known RBP	6.63	□□□□□ -1.35
NRXN1-223	ENST00000625891	RRAGB	Q5VZM2	374 aa		6.63	□□□□□ -1.35
NRXN1-223	ENST00000625891	TNS3	Q68CZ2	1445 aa		6.63	□□□□□ -1.35
NRXN1-223	ENST00000625891		Q6ZNX1	250 aa		6.63	□□□□□ -1.35
NRXN1-223	ENST00000625891	MMS22L	Q6ZRQ5	1243 aa		6.63	□□□□□ -1.35
NRXN1-223	ENST00000625891	PRIMA1	Q86XR5	153 aa		6.63	□□□□□ -1.35
NRXN1-223	ENST00000625891	ANKRD18A	Q8IVF6	992 aa		6.63	□□□□□ -1.35
NRXN1-223	ENST00000625891	SLC15A3	Q8IY34	581 aa		6.63	□□□□□ -1.35
NRXN1-223	ENST00000625891	BEND2	Q8NDZ0	799 aa		6.63	□□□□□ -1.35
NRXN1-223	ENST00000625891	PPP2R3C	Q969Q6	453 aa		6.63	□□□□□ -1.35
NRXN1-223	ENST00000625891	ZNF764	Q96H86	408 aa	Predicted RBP	6.63	□□□□□ -1.35
NRXN1-223	ENST00000625891	PGBD1	Q96JS3	809 aa		6.63	□□□□□ -1.35
NRXN1-223	ENST00000625891	TBATA	Q96M53	351 aa		6.63	□□□□□ -1.35
NRXN1-223	ENST00000625891	SENP7	Q9BQF6	1050 aa		6.63	□□□□□ -1.35
NRXN1-223	ENST00000625891	NWD2	Q9ULI1	1742 aa		6.63	□□□□□ -1.35
NRXN1-223	ENST00000625891	PCDHGB2	Q9Y5G2	931 aa		6.63	□□□□□ -1.35
NRXN1-223	ENST00000625891	ARHGEF28	Q8N1W1	1705 aa	Known RBP	6.62	□□□□□ -1.35
NRXN1-223	ENST00000625891	PHRF1	Q9P1Y6	1649 aa	Known RBP	6.62	□□□□□ -1.35
NRXN1-223	ENST00000625891	GOLGA6L3	A6NEY3	463 aa		6.62	□□□□□ -1.35
NRXN1-223	ENST00000625891	ZAR1L	A6NP61	321 aa		6.62	□□□□□ -1.35
NRXN1-223	ENST00000625891	INMT	O95050	263 aa		6.62	□□□□□ -1.35
NRXN1-223	ENST00000625891	ADORA2A	P29274	412 aa		6.62	□□□□□ -1.35
NRXN1-223	ENST00000625891	HSPA7	P48741	367 aa		6.62	□□□□□ -1.35
NRXN1-223	ENST00000625891	PDE6C	P51160	858 aa		6.62	□□□□□ -1.35
NRXN1-223	ENST00000625891	SEC24C	P53992	1094 aa		6.62	□□□□□ -1.35
NRXN1-223	ENST00000625891	ATXN1	P54253	815 aa	Known RBP	6.62	□□□□□ -1.35
NRXN1-223	ENST00000625891	MRPS21	P82921	87 aa	Known RBP	6.62	□□□□□ -1.35
NRXN1-223	ENST00000625891	PPFIA1	Q13136	1202 aa		6.62	□□□□□ -1.35
NRXN1-223	ENST00000625891	MAPRE1	Q15691	268 aa	Known RBP	6.62	□□□□□ -1.35
NRXN1-223	ENST00000625891	TXNRD1	Q16881	649 aa		6.62	□□□□□ -1.35
NRXN1-223	ENST00000625891	MPEG1	Q2M385	716 aa		6.62	□□□□□ -1.35
NRXN1-223	ENST00000625891	TUBB8	Q3ZCM7	444 aa		6.62	□□□□□ -1.35
NRXN1-223	ENST00000625891	MAVS	Q7Z434	540 aa		6.62	□□□□□ -1.35
NRXN1-223	ENST00000625891	LCORL	Q8N3X6	602 aa		6.62	□□□□□ -1.35
NRXN1-223	ENST00000625891	MYCT1	Q8N699	235 aa		6.62	□□□□□ -1.35
NRXN1-223	ENST00000625891	FANCB	Q8NB91	859 aa		6.62	□□□□□ -1.35
NRXN1-223	ENST00000625891	ZNF384	Q8TF68	577 aa		6.62	□□□□□ -1.35
NRXN1-223	ENST00000625891	NTN5	Q8WTR8	489 aa	Predicted RBP	6.62	□□□□□ -1.35
NRXN1-223	ENST00000625891	GCC1	Q96CN9	775 aa		6.62	□□□□□ -1.35
NRXN1-223	ENST00000625891	NAF1	Q96HR8	494 aa	Known RBP	6.62	□□□□□ -1.35
NRXN1-223	ENST00000625891	FAM83D	Q9H4H8	585 aa		6.62	□□□□□ -1.35
NRXN1-223	ENST00000625891	TERF2IP	Q9NYB0	399 aa		6.62	□□□□□ -1.35
NRXN1-223	ENST00000625891	SNX14	Q9Y5W7	946 aa		6.62	□□□□□ -1.35
NRXN1-223	ENST00000625891	THSD7A	Q9UPZ6	1657 aa		6.61	□□□□□ -1.35
NRXN1-223	ENST00000625891	DHX57	Q6P158	1386 aa	Known RBP	6.61	□□□□□ -1.35
NRXN1-223	ENST00000625891	SALL3	Q9BXA9	1300 aa		6.61	□□□□□ -1.35
NRXN1-223	ENST00000625891	ADM5	C9JUS6	153 aa		6.61	□□□□□ -1.35
NRXN1-223	ENST00000625891	MPPED1	O15442	326 aa		6.61	□□□□□ -1.35
NRXN1-223	ENST00000625891	CD3EAP	O15446	510 aa	Known RBP	6.61	□□□□□ -1.35
NRXN1-223	ENST00000625891	ESRRB	O95718	433 aa		6.61	□□□□□ -1.35
NRXN1-223	ENST00000625891	MYL4	P12829	197 aa		6.61	□□□□□ -1.35
NRXN1-223	ENST00000625891	EEF1G	P26641	437 aa	Known RBP	6.61	□□□□□ -1.35
NRXN1-223	ENST00000625891	GABRB3	P28472	473 aa		6.61	□□□□□ -1.35
NRXN1-223	ENST00000625891	PCSK6	P29122	969 aa		6.61	□□□□□ -1.35
NRXN1-223	ENST00000625891	DDIT3	P35638	169 aa		6.61	□□□□□ -1.35
NRXN1-223	ENST00000625891	PRKAG1	P54619	331 aa		6.61	□□□□□ -1.35
NRXN1-223	ENST00000625891	CACHD1	Q5VU97	1274 aa		6.61	□□□□□ -1.35
NRXN1-223	ENST00000625891	KIAA0408	Q6ZU52	694 aa		6.61	□□□□□ -1.35
NRXN1-223	ENST00000625891	ABRA	Q8N0Z2	381 aa		6.61	□□□□□ -1.35
NRXN1-223	ENST00000625891	TXLNB	Q8N3L3	684 aa		6.61	□□□□□ -1.35
NRXN1-223	ENST00000625891	SLC44A3	Q8N4M1	653 aa		6.61	□□□□□ -1.35
NRXN1-223	ENST00000625891	TOR1AIP2	Q8NFQ8	470 aa		6.61	□□□□□ -1.35
NRXN1-223	ENST00000625891	CYP2W1	Q8TAV3	490 aa		6.61	□□□□□ -1.35
NRXN1-223	ENST00000625891	DNAJB14	Q8TBM8	379 aa		6.61	□□□□□ -1.35
NRXN1-223	ENST00000625891	RFK	Q969G6	155 aa		6.61	□□□□□ -1.35
NRXN1-223	ENST00000625891	ZNF566	Q969W8	418 aa		6.61	□□□□□ -1.35
NRXN1-223	ENST00000625891	PAGR1	Q9BTK6	254 aa		6.61	□□□□□ -1.35

Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms