RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 TSC2P49815 1807 aa18.81■□□□□ 0.6
SMPD3-211ENST00000568373 M0QYT0 321 aa18.81■□□□□ 0.6
SMPD3-211ENST00000568373 NRP1O14786 923 aa18.81■□□□□ 0.6
SMPD3-211ENST00000568373 B3GAT3O94766 335 aa18.81■□□□□ 0.6
SMPD3-211ENST00000568373 TSHRP16473 764 aa18.81■□□□□ 0.6
SMPD3-211ENST00000568373 GOT1P17174 413 aa18.81■□□□□ 0.6
SMPD3-211ENST00000568373 SSTR1P30872 391 aa18.81■□□□□ 0.6
SMPD3-211ENST00000568373 GRIK3Q13003 919 aa18.81■□□□□ 0.6
SMPD3-211ENST00000568373 EFHC2Q5JST6 749 aa18.81■□□□□ 0.6
SMPD3-211ENST00000568373 SYPL2Q5VXT5 272 aa18.81■□□□□ 0.6
SMPD3-211ENST00000568373 NCBP2-AS2Q69YL0 99 aa18.81■□□□□ 0.6
SMPD3-211ENST00000568373 C3orf62Q6ZUJ4 267 aa18.81■□□□□ 0.6
SMPD3-211ENST00000568373 HFE2Q6ZVN8 426 aa18.81■□□□□ 0.6
SMPD3-211ENST00000568373 KCNK16Q96T55 309 aa18.81■□□□□ 0.6
SMPD3-211ENST00000568373 CNGB3Q9NQW8 809 aa18.81■□□□□ 0.6
SMPD3-211ENST00000568373 TMEM30AQ9NV96 361 aa18.81■□□□□ 0.6
SMPD3-211ENST00000568373 DDX20Q9UHI6 824 aaKnown RBP18.81■□□□□ 0.6
SMPD3-211ENST00000568373 RABGEF1Q9UJ41 708 aa18.81■□□□□ 0.6
SMPD3-211ENST00000568373 ATXN2Q99700 1313 aaKnown RBP18.81■□□□□ 0.6
SMPD3-211ENST00000568373 CABYRO75952 493 aa18.8■□□□□ 0.6
SMPD3-211ENST00000568373 IBSPP21815 317 aaPredicted RBP18.8■□□□□ 0.6
SMPD3-211ENST00000568373 IFNAR2P48551 515 aa18.8■□□□□ 0.6
SMPD3-211ENST00000568373 CACNA2D1P54289 1103 aa18.8■□□□□ 0.6
SMPD3-211ENST00000568373 DAOAP59103 153 aa18.8■□□□□ 0.6
SMPD3-211ENST00000568373 MTM1Q13496 603 aa18.8■□□□□ 0.6
SMPD3-211ENST00000568373 RAB41Q5JT25 222 aa18.8■□□□□ 0.6
SMPD3-211ENST00000568373 C4orf22Q6V702 233 aa18.8■□□□□ 0.6
SMPD3-211ENST00000568373 RNF180Q86T96 592 aa18.8■□□□□ 0.6
SMPD3-211ENST00000568373 TRABD2AQ86V40 505 aa18.8■□□□□ 0.6
SMPD3-211ENST00000568373 MGARPQ8TDB4 240 aa18.8■□□□□ 0.6
SMPD3-211ENST00000568373 SMARCD1Q96GM5 515 aa18.8■□□□□ 0.6
SMPD3-211ENST00000568373 RTP3Q9BQQ7 232 aa18.8■□□□□ 0.6
SMPD3-211ENST00000568373 KLC2Q9H0B6 622 aa18.8■□□□□ 0.6
SMPD3-211ENST00000568373 PRDM16Q9HAZ2 1276 aa18.8■□□□□ 0.6
SMPD3-211ENST00000568373 I3L4J1 428 aa18.8■□□□□ 0.6
SMPD3-211ENST00000568373 FYNP06241 537 aa18.8■□□□□ 0.6
SMPD3-211ENST00000568373 SKIP12755 728 aa18.8■□□□□ 0.6
SMPD3-211ENST00000568373 AMPD1P23109 780 aa18.8■□□□□ 0.6
SMPD3-211ENST00000568373 MAGEA6P43360 314 aa18.8■□□□□ 0.6
SMPD3-211ENST00000568373 VEGFBP49765 207 aa18.8■□□□□ 0.6
SMPD3-211ENST00000568373 RABGGTBP53611 331 aa18.8■□□□□ 0.6
SMPD3-211ENST00000568373 GEMIN4P57678 1058 aaKnown RBP18.8■□□□□ 0.6
SMPD3-211ENST00000568373 CBLBQ13191 982 aa18.8■□□□□ 0.6
SMPD3-211ENST00000568373 MPP2Q14168 576 aa18.8■□□□□ 0.6
SMPD3-211ENST00000568373 LRRC14Q15048 493 aa18.8■□□□□ 0.6
SMPD3-211ENST00000568373 MAP3K21Q5TCX8 1036 aa18.8■□□□□ 0.6
SMPD3-211ENST00000568373 GKAP1Q5VSY0 366 aaPredicted RBP18.8■□□□□ 0.6
SMPD3-211ENST00000568373 KCNT2Q6UVM3 1135 aa18.8■□□□□ 0.6
SMPD3-211ENST00000568373 GPRIN1Q7Z2K8 1008 aa18.8■□□□□ 0.6
SMPD3-211ENST00000568373 PALM2Q8IXS6 379 aa18.8■□□□□ 0.6
SMPD3-211ENST00000568373 DYDC1Q8WWB3 177 aa18.8■□□□□ 0.6
SMPD3-211ENST00000568373 QKIQ96PU8 341 aaKnown RBP eCLIP18.8■□□□□ 0.6
SMPD3-211ENST00000568373 FRMD8Q9BZ67 464 aaPredicted RBP18.8■□□□□ 0.6
SMPD3-211ENST00000568373 ACSS3Q9H6R3 686 aa18.8■□□□□ 0.6
SMPD3-211ENST00000568373 ETNK2Q9NVF9 386 aa18.8■□□□□ 0.6
SMPD3-211ENST00000568373 DTLQ9NZJ0 730 aa18.8■□□□□ 0.6
SMPD3-211ENST00000568373 PSMC3IPQ9P2W1 217 aaPredicted RBP18.8■□□□□ 0.6
SMPD3-211ENST00000568373 SYNJ2BP-COX16A0A087WUM0 186 aa18.79■□□□□ 0.6
SMPD3-211ENST00000568373 YJEFN3A6XGL0 299 aa18.79■□□□□ 0.6
SMPD3-211ENST00000568373 E7ENQ6 273 aa18.79■□□□□ 0.6
SMPD3-211ENST00000568373 CYP11A1P05108 521 aa18.79■□□□□ 0.6
SMPD3-211ENST00000568373 ACLYP53396 1101 aa18.79■□□□□ 0.6
SMPD3-211ENST00000568373 CORO7P57737 925 aa18.79■□□□□ 0.6
SMPD3-211ENST00000568373 DEUP1Q05D60 604 aa18.79■□□□□ 0.6
SMPD3-211ENST00000568373 NME3Q13232 169 aa18.79■□□□□ 0.6
SMPD3-211ENST00000568373 TUSC3Q13454 348 aa18.79■□□□□ 0.6
SMPD3-211ENST00000568373 PAN2Q504Q3 1202 aaKnown RBP18.79■□□□□ 0.6
SMPD3-211ENST00000568373 FAM182AQ5T1J6 154 aa18.79■□□□□ 0.6
SMPD3-211ENST00000568373 ANKRD42Q8N9B4 389 aa18.79■□□□□ 0.6
SMPD3-211ENST00000568373 CCDC110Q8TBZ0 833 aa18.79■□□□□ 0.6
SMPD3-211ENST00000568373 LRRN4Q8WUT4 740 aa18.79■□□□□ 0.6
SMPD3-211ENST00000568373 SEC16BQ96JE7 1060 aa18.79■□□□□ 0.6
SMPD3-211ENST00000568373 ACBD6Q9BR61 282 aa18.79■□□□□ 0.6
SMPD3-211ENST00000568373 ARHGEF4Q9NR80 690 aa18.79■□□□□ 0.6
SMPD3-211ENST00000568373 COX16Q9P0S2 106 aa18.79■□□□□ 0.6
SMPD3-211ENST00000568373 SRRDQ9UH36 339 aa18.79■□□□□ 0.6
SMPD3-211ENST00000568373 INPP5FQ9Y2H2 1132 aa18.79■□□□□ 0.6
SMPD3-211ENST00000568373 SQORQ9Y6N5 450 aa18.79■□□□□ 0.6
SMPD3-211ENST00000568373 HHLA1C9JL84 531 aa18.78■□□□□ 0.6
SMPD3-211ENST00000568373 ANKRD65E5RJM6 399 aa18.78■□□□□ 0.6
SMPD3-211ENST00000568373 MYO1CO00159 1063 aa18.78■□□□□ 0.6
SMPD3-211ENST00000568373 CAPN9O14815 690 aa18.78■□□□□ 0.6
SMPD3-211ENST00000568373 GCATO75600 419 aa18.78■□□□□ 0.6
SMPD3-211ENST00000568373 ATP2A2P16615 1042 aaKnown RBP18.78■□□□□ 0.6
SMPD3-211ENST00000568373 KLHL38Q2WGJ6 581 aa18.78■□□□□ 0.6
SMPD3-211ENST00000568373 SYCP2LQ5T4T6 812 aa18.78■□□□□ 0.6
SMPD3-211ENST00000568373 CD300LGQ6UXG3 332 aa18.78■□□□□ 0.6
SMPD3-211ENST00000568373 METTL23Q86XA0 190 aa18.78■□□□□ 0.6
SMPD3-211ENST00000568373 FBF1Q8TES7 1133 aa18.78■□□□□ 0.6
SMPD3-211ENST00000568373 RNF139Q8WU17 664 aa18.78■□□□□ 0.6
SMPD3-211ENST00000568373 MYLPFQ96A32 169 aa18.78■□□□□ 0.6
SMPD3-211ENST00000568373 OLFM3Q96PB7 478 aa18.78■□□□□ 0.6
SMPD3-211ENST00000568373 CSNK1G1Q9HCP0 422 aa18.78■□□□□ 0.6
SMPD3-211ENST00000568373 PIGVQ9NUD9 493 aa18.78■□□□□ 0.6
SMPD3-211ENST00000568373 SENP1Q9P0U3 644 aa18.78■□□□□ 0.6
SMPD3-211ENST00000568373 CHMP2BQ9UQN3 213 aa18.78■□□□□ 0.6
SMPD3-211ENST00000568373 MFHAS1Q9Y4C4 1052 aa18.78■□□□□ 0.6
SMPD3-211ENST00000568373 TEX264Q9Y6I9 313 aa18.78■□□□□ 0.6
SMPD3-211ENST00000568373 C9IYK1 514 aa18.78■□□□□ 0.6
SMPD3-211ENST00000568373 H3BRJ5 948 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms