RNA–Protein interactions for RNA: ENST00000559974.5

RABGGTA-212, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,963 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-212ENST00000559974 B3GALNT2Q8NCR0 500 aa15.02■□□□□ -0
RABGGTA-212ENST00000559974 MRRFQ96E11 262 aaKnown RBP15.02■□□□□ -0
RABGGTA-212ENST00000559974 TSEN34Q9BSV6 310 aaKnown RBP15.02■□□□□ -0
RABGGTA-212ENST00000559974 DHX35Q9H5Z1 703 aaKnown RBP15.02■□□□□ -0
RABGGTA-212ENST00000559974 KIF9Q9HAQ2 790 aa15.02■□□□□ -0
RABGGTA-212ENST00000559974 STARD7Q9NQZ5 370 aa15.02■□□□□ -0
RABGGTA-212ENST00000559974 RAB6BQ9NRW1 208 aa15.02■□□□□ -0
RABGGTA-212ENST00000559974 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.02■□□□□ -0
RABGGTA-212ENST00000559974 GTF2IRD1Q9UHL9 959 aa15.02■□□□□ -0
RABGGTA-212ENST00000559974 AP4E1Q9UPM8 1137 aa15.02■□□□□ -0
RABGGTA-212ENST00000559974 H0YHG0 523 aa15.02□□□□□ -0.01
RABGGTA-212ENST00000559974 PTGESO14684 152 aa15.02□□□□□ -0.01
RABGGTA-212ENST00000559974 KPNA6O60684 536 aa15.02□□□□□ -0.01
RABGGTA-212ENST00000559974 ZFXP17010 805 aaPredicted RBP15.02□□□□□ -0.01
RABGGTA-212ENST00000559974 ATXN1P54253 815 aaKnown RBP15.02□□□□□ -0.01
RABGGTA-212ENST00000559974 WDR4P57081 412 aaKnown RBP15.02□□□□□ -0.01
RABGGTA-212ENST00000559974 CBLBQ13191 982 aa15.02□□□□□ -0.01
RABGGTA-212ENST00000559974 MTM1Q13496 603 aa15.02□□□□□ -0.01
RABGGTA-212ENST00000559974 EFHC1Q5JVL4 640 aa15.02□□□□□ -0.01
RABGGTA-212ENST00000559974 ADGRD1Q6QNK2 874 aa15.02□□□□□ -0.01
RABGGTA-212ENST00000559974 STRADAQ7RTN6 431 aa15.02□□□□□ -0.01
RABGGTA-212ENST00000559974 CDKL3Q8IVW4 592 aaPredicted RBP15.02□□□□□ -0.01
RABGGTA-212ENST00000559974 C4orf33Q8N1A6 199 aa15.02□□□□□ -0.01
RABGGTA-212ENST00000559974 DENND1AQ8TEH3 1009 aa15.02□□□□□ -0.01
RABGGTA-212ENST00000559974 PAWRQ96IZ0 340 aaKnown RBP15.02□□□□□ -0.01
RABGGTA-212ENST00000559974 GLT1D1Q96MS3 346 aa15.02□□□□□ -0.01
RABGGTA-212ENST00000559974 PPP1R10Q96QC0 940 aaKnown RBP15.02□□□□□ -0.01
RABGGTA-212ENST00000559974 PAFAH2Q99487 392 aa15.02□□□□□ -0.01
RABGGTA-212ENST00000559974 HNRNPABQ99729 332 aaKnown RBP15.02□□□□□ -0.01
RABGGTA-212ENST00000559974 FRMD8Q9BZ67 464 aaPredicted RBP15.02□□□□□ -0.01
RABGGTA-212ENST00000559974 CHMP2BQ9UQN3 213 aa15.02□□□□□ -0.01
RABGGTA-212ENST00000559974 USP15Q9Y4E8 981 aaPredicted RBP15.02□□□□□ -0.01
RABGGTA-212ENST00000559974 TSC2P49815 1807 aa15.01□□□□□ -0.01
RABGGTA-212ENST00000559974 ASMTLO95671 621 aa15.01□□□□□ -0.01
RABGGTA-212ENST00000559974 ELK3P41970 407 aa15.01□□□□□ -0.01
RABGGTA-212ENST00000559974 MATKP42679 507 aa15.01□□□□□ -0.01
RABGGTA-212ENST00000559974 SLC8A3P57103 927 aa15.01□□□□□ -0.01
RABGGTA-212ENST00000559974 MRPS6P82932 125 aaKnown RBP15.01□□□□□ -0.01
RABGGTA-212ENST00000559974 SF3A3Q12874 501 aaKnown RBP eCLIP15.01□□□□□ -0.012e-7■■■■■ 27.5
RABGGTA-212ENST00000559974 PIGZQ86VD9 579 aa15.01□□□□□ -0.01
RABGGTA-212ENST00000559974 FUKQ8N0W3 1084 aa15.01□□□□□ -0.01
RABGGTA-212ENST00000559974 DUSP16Q9BY84 665 aa15.01□□□□□ -0.01
RABGGTA-212ENST00000559974 KLC2Q9H0B6 622 aa15.01□□□□□ -0.01
RABGGTA-212ENST00000559974 MTMR10Q9NXD2 777 aa15.01□□□□□ -0.01
RABGGTA-212ENST00000559974 TEX264Q9Y6I9 313 aa15.01□□□□□ -0.01
RABGGTA-212ENST00000559974 ALPK3Q96L96 1907 aa15□□□□□ -0.01
RABGGTA-212ENST00000559974 M0QZ92 97 aa15□□□□□ -0.01
RABGGTA-212ENST00000559974 MAP3K6O95382 1288 aa15□□□□□ -0.01
RABGGTA-212ENST00000559974 FAM163BP0C2L3 166 aa15□□□□□ -0.01
RABGGTA-212ENST00000559974 COL6A1P12109 1028 aa15□□□□□ -0.01
RABGGTA-212ENST00000559974 TAC1P20366 129 aa15□□□□□ -0.01
RABGGTA-212ENST00000559974 MSH2P43246 934 aa15□□□□□ -0.01
RABGGTA-212ENST00000559974 SCTRP47872 440 aa15□□□□□ -0.01
RABGGTA-212ENST00000559974 NR2C2P49116 596 aa15□□□□□ -0.01
RABGGTA-212ENST00000559974 SLC20A2Q08357 652 aa15□□□□□ -0.01
RABGGTA-212ENST00000559974 XRCC4Q13426 336 aa15□□□□□ -0.01
RABGGTA-212ENST00000559974 SPARCL1Q14515 664 aa15□□□□□ -0.01
RABGGTA-212ENST00000559974 IGDCC3Q8IVU1 814 aa15□□□□□ -0.01
RABGGTA-212ENST00000559974 CNPY4Q8N129 248 aa15□□□□□ -0.01
RABGGTA-212ENST00000559974 CCDC185Q8N715 623 aa15□□□□□ -0.01
RABGGTA-212ENST00000559974 ZFP42Q96MM3 310 aa15□□□□□ -0.01
RABGGTA-212ENST00000559974 KCTD15Q96SI1 283 aaPredicted RBP15□□□□□ -0.01
RABGGTA-212ENST00000559974 SSU72Q9NP77 194 aaKnown RBP15□□□□□ -0.01
RABGGTA-212ENST00000559974 MYO18AQ92614 2054 aaKnown RBP15□□□□□ -0.01
RABGGTA-212ENST00000559974 A0A1W2PPM1 405 aa15□□□□□ -0.01
RABGGTA-212ENST00000559974 CYB561D2O14569 222 aa15□□□□□ -0.01
RABGGTA-212ENST00000559974 TYROBPO43914 113 aa15□□□□□ -0.01
RABGGTA-212ENST00000559974 ATP2C2O75185 946 aa15□□□□□ -0.01
RABGGTA-212ENST00000559974 SPAG6O75602 509 aa15□□□□□ -0.01
RABGGTA-212ENST00000559974 SUN1O94901 812 aa15□□□□□ -0.01
RABGGTA-212ENST00000559974 NPR3P17342 541 aa15□□□□□ -0.01
RABGGTA-212ENST00000559974 CA4P22748 312 aa15□□□□□ -0.01
RABGGTA-212ENST00000559974 FOXN2P32314 431 aa15□□□□□ -0.01
RABGGTA-212ENST00000559974 MAGEA6P43360 314 aa15□□□□□ -0.01
RABGGTA-212ENST00000559974 GBE1Q04446 702 aa15□□□□□ -0.01
RABGGTA-212ENST00000559974 ADIGQ0VDE8 80 aa15□□□□□ -0.01
RABGGTA-212ENST00000559974 ZKSCAN8Q15776 578 aaPredicted RBP15□□□□□ -0.01
RABGGTA-212ENST00000559974 SLC25A52Q3SY17 297 aa15□□□□□ -0.01
RABGGTA-212ENST00000559974 SLC45A4Q5BKX6 768 aa15□□□□□ -0.01
RABGGTA-212ENST00000559974 C4orf22Q6V702 233 aa15□□□□□ -0.01
RABGGTA-212ENST00000559974 TRPM8Q7Z2W7 1104 aa15□□□□□ -0.01
RABGGTA-212ENST00000559974 SPATA21Q7Z572 469 aa15□□□□□ -0.01
RABGGTA-212ENST00000559974 SLC43A3Q8NBI5 491 aa15□□□□□ -0.01
RABGGTA-212ENST00000559974 DCAKDQ8WVC6 231 aa15□□□□□ -0.01
RABGGTA-212ENST00000559974 CSPG4P5Q96PW8 444 aa15□□□□□ -0.01
RABGGTA-212ENST00000559974 CYTH2Q99418 400 aa15□□□□□ -0.01
RABGGTA-212ENST00000559974 PAIP2Q9BPZ3 127 aaKnown RBP15□□□□□ -0.01
RABGGTA-212ENST00000559974 TMEM106CQ9BVX2 250 aa15□□□□□ -0.01
RABGGTA-212ENST00000559974 ETNK2Q9NVF9 386 aa15□□□□□ -0.01
RABGGTA-212ENST00000559974 TRPV2Q9Y5S1 764 aa15□□□□□ -0.01
RABGGTA-212ENST00000559974 CDY2AQ9Y6F7 541 aa15□□□□□ -0.01
RABGGTA-212ENST00000559974 TNRC18O15417 2968 aaPredicted RBP14.99□□□□□ -0.01
RABGGTA-212ENST00000559974 DAB1O75553 588 aa14.99□□□□□ -0.01
RABGGTA-212ENST00000559974 PTPN1P18031 435 aaKnown RBP14.99□□□□□ -0.01
RABGGTA-212ENST00000559974 KRT4P19013 534 aa14.99□□□□□ -0.01
RABGGTA-212ENST00000559974 ACAT1P24752 427 aaKnown RBP14.99□□□□□ -0.01
RABGGTA-212ENST00000559974 RPA3P35244 121 aaPredicted RBP14.99□□□□□ -0.01
RABGGTA-212ENST00000559974 SULT1E1P49888 294 aa14.99□□□□□ -0.01
RABGGTA-212ENST00000559974 SYCP2LQ5T4T6 812 aa14.99□□□□□ -0.01
RABGGTA-212ENST00000559974 WSCD1Q658N2 575 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms