RNA–Protein interactions for RNA: ENST00000533801.6

ATP2C1-224, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,690 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-224ENST00000533801 USP6NLQ92738 828 aa16.5■□□□□ 0.23
ATP2C1-224ENST00000533801 PGBD4Q96DM1 585 aa16.5■□□□□ 0.23
ATP2C1-224ENST00000533801 SENP8Q96LD8 212 aa16.5■□□□□ 0.23
ATP2C1-224ENST00000533801 DDIT4Q9NX09 232 aa16.5■□□□□ 0.23
ATP2C1-224ENST00000533801 KIAA1257Q9ULG3 409 aa16.5■□□□□ 0.23
ATP2C1-224ENST00000533801 COL1A2P08123 1366 aa16.5■□□□□ 0.23
ATP2C1-224ENST00000533801 SLC15A5A6NIM6 579 aa16.5■□□□□ 0.23
ATP2C1-224ENST00000533801 GOLGA8TH3BQL2 631 aa16.5■□□□□ 0.23
ATP2C1-224ENST00000533801 FSBPO95073 299 aa16.5■□□□□ 0.23
ATP2C1-224ENST00000533801 BGNP21810 368 aa16.5■□□□□ 0.23
ATP2C1-224ENST00000533801 BRCC3P46736 316 aa16.5■□□□□ 0.23
ATP2C1-224ENST00000533801 SNX16P57768 344 aa16.5■□□□□ 0.23
ATP2C1-224ENST00000533801 KHSRPQ92945 711 aaKnown RBP eCLIP16.5■□□□□ 0.232e-6■■■□□ 16.8
ATP2C1-224ENST00000533801 SERAC1Q96JX3 654 aa16.5■□□□□ 0.23
ATP2C1-224ENST00000533801 CSPG4P5Q96PW8 444 aa16.5■□□□□ 0.23
ATP2C1-224ENST00000533801 ACTR5Q9H9F9 607 aaPredicted RBP16.5■□□□□ 0.23
ATP2C1-224ENST00000533801 MORF4L1Q9UBU8 362 aa16.5■□□□□ 0.23
ATP2C1-224ENST00000533801 GABRB2P47870 512 aa16.49■□□□□ 0.23
ATP2C1-224ENST00000533801 NBPF20Q3BBV1 942 aa16.49■□□□□ 0.23
ATP2C1-224ENST00000533801 SV2CQ496J9 727 aa16.49■□□□□ 0.23
ATP2C1-224ENST00000533801 ZNF354CQ86Y25 554 aa16.49■□□□□ 0.23
ATP2C1-224ENST00000533801 DNAAF3Q8N9W5 541 aa16.49■□□□□ 0.23
ATP2C1-224ENST00000533801 ARMC2Q8NEN0 867 aa16.49■□□□□ 0.23
ATP2C1-224ENST00000533801 SGSM3Q96HU1 749 aa16.49■□□□□ 0.23
ATP2C1-224ENST00000533801 TSPYL2Q9H2G4 693 aaPredicted RBP16.49■□□□□ 0.23
ATP2C1-224ENST00000533801 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.49■□□□□ 0.231e-6■■□□□ 13
ATP2C1-224ENST00000533801 KLHL8Q9P2G9 620 aaPredicted RBP16.49■□□□□ 0.23
ATP2C1-224ENST00000533801 HAO1Q9UJM8 370 aa16.49■□□□□ 0.23
ATP2C1-224ENST00000533801 WDR27A2RRH5 827 aa16.49■□□□□ 0.23
ATP2C1-224ENST00000533801 COPEO14579 308 aa16.49■□□□□ 0.23
ATP2C1-224ENST00000533801 MFSD11O43934 449 aa16.49■□□□□ 0.23
ATP2C1-224ENST00000533801 PTPN1P18031 435 aaKnown RBP16.49■□□□□ 0.23
ATP2C1-224ENST00000533801 YWHAZP63104 245 aaKnown RBP16.49■□□□□ 0.23
ATP2C1-224ENST00000533801 POU5F1BQ06416 359 aa16.49■□□□□ 0.23
ATP2C1-224ENST00000533801 STILQ15468 1287 aa16.49■□□□□ 0.23
ATP2C1-224ENST00000533801 CST9Q5W186 159 aa16.49■□□□□ 0.23
ATP2C1-224ENST00000533801 ZCCHC23Q6ZST2 131 aa16.49■□□□□ 0.23
ATP2C1-224ENST00000533801 FAM228AQ86W67 206 aa16.49■□□□□ 0.23
ATP2C1-224ENST00000533801 FUKQ8N0W3 1084 aa16.49■□□□□ 0.23
ATP2C1-224ENST00000533801 NUP205Q92621 2012 aa16.49■□□□□ 0.23
ATP2C1-224ENST00000533801 SMIM35A0A1B0GVV1 85 aa16.49■□□□□ 0.23
ATP2C1-224ENST00000533801 F8W810 466 aa16.49■□□□□ 0.23
ATP2C1-224ENST00000533801 ATP9BO43861 1147 aa16.49■□□□□ 0.23
ATP2C1-224ENST00000533801 CBX6O95503 412 aa16.49■□□□□ 0.23
ATP2C1-224ENST00000533801 ARPP19P56211 112 aa16.49■□□□□ 0.23
ATP2C1-224ENST00000533801 ZIC5Q96T25 663 aa16.49■□□□□ 0.23
ATP2C1-224ENST00000533801 SLC4A5Q9BY07 1137 aa16.49■□□□□ 0.23
ATP2C1-224ENST00000533801 ZNF395Q9H8N7 513 aaPredicted RBP16.49■□□□□ 0.23
ATP2C1-224ENST00000533801 L1CAMP32004 1257 aa16.48■□□□□ 0.23
ATP2C1-224ENST00000533801 PDK2Q15119 407 aa16.48■□□□□ 0.23
ATP2C1-224ENST00000533801 ECHDC2Q86YB7 292 aa16.48■□□□□ 0.23
ATP2C1-224ENST00000533801 SMG8Q8ND04 991 aaKnown RBP16.48■□□□□ 0.23
ATP2C1-224ENST00000533801 WNT8BQ93098 351 aa16.48■□□□□ 0.23
ATP2C1-224ENST00000533801 ACSS3Q9H6R3 686 aa16.48■□□□□ 0.23
ATP2C1-224ENST00000533801 PLEKHA5Q9HAU0 1116 aa16.48■□□□□ 0.23
ATP2C1-224ENST00000533801 USP29Q9HBJ7 922 aa16.48■□□□□ 0.23
ATP2C1-224ENST00000533801 LGALS13Q9UHV8 139 aa16.48■□□□□ 0.23
ATP2C1-224ENST00000533801 EIF4E1BA6NMX2 242 aaKnown RBP16.48■□□□□ 0.23
ATP2C1-224ENST00000533801 NRP1O14786 923 aa16.48■□□□□ 0.23
ATP2C1-224ENST00000533801 FAM200BP0CF97 657 aa16.48■□□□□ 0.23
ATP2C1-224ENST00000533801 CD52P31358 61 aa16.48■□□□□ 0.23
ATP2C1-224ENST00000533801 TMEM110Q86TL2 294 aa16.48■□□□□ 0.23
ATP2C1-224ENST00000533801 FOXP3Q9BZS1 431 aa16.48■□□□□ 0.23
ATP2C1-224ENST00000533801 MIOSQ9NXC5 875 aa16.48■□□□□ 0.23
ATP2C1-224ENST00000533801 IQANK1A0A1B0GTG1 560 aa16.48■□□□□ 0.23
ATP2C1-224ENST00000533801 BDNFP23560 247 aa16.48■□□□□ 0.23
ATP2C1-224ENST00000533801 SDHAF4Q5VUM1 108 aa16.48■□□□□ 0.23
ATP2C1-224ENST00000533801 CGB2Q6NT52 195 aa16.48■□□□□ 0.23
ATP2C1-224ENST00000533801 RFX8Q6ZV50 586 aa16.48■□□□□ 0.23
ATP2C1-224ENST00000533801 IFNLR1Q8IU57 520 aaPredicted RBP16.48■□□□□ 0.23
ATP2C1-224ENST00000533801 SCN4BQ8IWT1 228 aa16.48■□□□□ 0.23
ATP2C1-224ENST00000533801 PARP9Q8IXQ6 854 aa16.48■□□□□ 0.23
ATP2C1-224ENST00000533801 ZNF75CPQ92670 426 aaPredicted RBP16.48■□□□□ 0.23
ATP2C1-224ENST00000533801 VRTNQ9H8Y1 702 aa16.48■□□□□ 0.23
ATP2C1-224ENST00000533801 GNEQ9Y223 722 aaKnown RBP16.48■□□□□ 0.23
ATP2C1-224ENST00000533801 YJEFN3A6XGL0 299 aa16.47■□□□□ 0.23
ATP2C1-224ENST00000533801 E7ENQ6 273 aa16.47■□□□□ 0.23
ATP2C1-224ENST00000533801 EEF2KO00418 725 aaKnown RBP16.47■□□□□ 0.23
ATP2C1-224ENST00000533801 ASMTLO95671 621 aa16.47■□□□□ 0.23
ATP2C1-224ENST00000533801 ABHD2P08910 425 aa16.47■□□□□ 0.23
ATP2C1-224ENST00000533801 ZNF865P0CJ78 1059 aaPredicted RBP16.47■□□□□ 0.23
ATP2C1-224ENST00000533801 GTF2A1P52655 376 aaPredicted RBP16.47■□□□□ 0.23
ATP2C1-224ENST00000533801 TNFAIP8L3Q5GJ75 292 aa16.47■□□□□ 0.23
ATP2C1-224ENST00000533801 FYB2Q5VWT5 728 aa16.47■□□□□ 0.23
ATP2C1-224ENST00000533801 C16orf46Q6P387 395 aa16.47■□□□□ 0.23
ATP2C1-224ENST00000533801 GPRIN1Q7Z2K8 1008 aa16.47■□□□□ 0.23
ATP2C1-224ENST00000533801 LRRC52Q8N7C0 313 aa16.47■□□□□ 0.23
ATP2C1-224ENST00000533801 LRRC37BQ96QE4 947 aa16.47■□□□□ 0.23
ATP2C1-224ENST00000533801 MYLK2Q9H1R3 596 aa16.47■□□□□ 0.23
ATP2C1-224ENST00000533801 ACSS2Q9NR19 701 aa16.47■□□□□ 0.23
ATP2C1-224ENST00000533801 DTLQ9NZJ0 730 aa16.47■□□□□ 0.23
ATP2C1-224ENST00000533801 RPSAP08865 295 aaKnown RBP16.47■□□□□ 0.23
ATP2C1-224ENST00000533801 TPH1P17752 444 aa16.47■□□□□ 0.23
ATP2C1-224ENST00000533801 PSMB4P28070 264 aa16.47■□□□□ 0.23
ATP2C1-224ENST00000533801 SNCBQ16143 134 aa16.47■□□□□ 0.23
ATP2C1-224ENST00000533801 CDKL3Q8IVW4 592 aaPredicted RBP16.47■□□□□ 0.23
ATP2C1-224ENST00000533801 AGGF1Q8N302 714 aaeCLIP16.47■□□□□ 0.232e-9■□□□□ 10.7
ATP2C1-224ENST00000533801 COLGALT1Q8NBJ5 622 aa16.47■□□□□ 0.23
ATP2C1-224ENST00000533801 AGR3Q8TD06 166 aa16.47■□□□□ 0.23
ATP2C1-224ENST00000533801 TFB1MQ8WVM0 346 aaKnown RBP16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms