RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 FAM163BP0C2L3 166 aa12□□□□□ -0.49
USP35-207ENST00000530546 TFE3P19532 575 aaPredicted RBP12□□□□□ -0.49
USP35-207ENST00000530546 SDC4P31431 198 aa12□□□□□ -0.49
USP35-207ENST00000530546 GNL1P36915 607 aaPredicted RBP12□□□□□ -0.49
USP35-207ENST00000530546 SOX4Q06945 474 aaPredicted RBP12□□□□□ -0.49
USP35-207ENST00000530546 RCN2Q14257 317 aa12□□□□□ -0.49
USP35-207ENST00000530546 PPP6R3Q5H9R7 873 aaPredicted RBP12□□□□□ -0.49
USP35-207ENST00000530546 C1QTNF12Q5T7M4 302 aa12□□□□□ -0.49
USP35-207ENST00000530546 TWF2Q6IBS0 349 aaKnown RBP12□□□□□ -0.49
USP35-207ENST00000530546 DARS2Q6PI48 645 aaKnown RBP12□□□□□ -0.49
USP35-207ENST00000530546 VSTM1Q6UX27 236 aa12□□□□□ -0.49
USP35-207ENST00000530546 TTC39CQ8N584 583 aa12□□□□□ -0.49
USP35-207ENST00000530546 TTC13Q8NBP0 860 aa12□□□□□ -0.49
USP35-207ENST00000530546 UCMAQ8WVF2 138 aa12□□□□□ -0.49
USP35-207ENST00000530546 MYLK2Q9H1R3 596 aa12□□□□□ -0.49
USP35-207ENST00000530546 SNX25Q9H3E2 840 aa12□□□□□ -0.49
USP35-207ENST00000530546 NMRK2Q9NPI5 230 aa12□□□□□ -0.49
USP35-207ENST00000530546 DNAAF2Q9NVR5 837 aaKnown RBP12□□□□□ -0.49
USP35-207ENST00000530546 BLOC1S6Q9UL45 172 aa12□□□□□ -0.49
USP35-207ENST00000530546 DERAQ9Y315 318 aa12□□□□□ -0.49
USP35-207ENST00000530546 HEY1Q9Y5J3 304 aa12□□□□□ -0.49
USP35-207ENST00000530546 EXOC1LA0A1B0GW35 172 aa11.99□□□□□ -0.49
USP35-207ENST00000530546 C17orf102A2RUQ5 167 aa11.99□□□□□ -0.49
USP35-207ENST00000530546 H7C0C1 242 aa11.99□□□□□ -0.49
USP35-207ENST00000530546 DCTN3O75935 186 aa11.99□□□□□ -0.49
USP35-207ENST00000530546 C6orf222P0C671 652 aaPredicted RBP11.99□□□□□ -0.49
USP35-207ENST00000530546 ATP5OP48047 213 aa11.99□□□□□ -0.49
USP35-207ENST00000530546 CPT1AP50416 773 aa11.99□□□□□ -0.49
USP35-207ENST00000530546 ATXN1P54253 815 aaKnown RBP11.99□□□□□ -0.49
USP35-207ENST00000530546 BASP1P80723 227 aaKnown RBP11.99□□□□□ -0.49
USP35-207ENST00000530546 CDC42EP1Q00587 391 aa11.99□□□□□ -0.49
USP35-207ENST00000530546 MORF4L2Q15014 288 aa11.99□□□□□ -0.49
USP35-207ENST00000530546 CGB2Q6NT52 195 aa11.99□□□□□ -0.49
USP35-207ENST00000530546 OLFML1Q6UWY5 402 aa11.99□□□□□ -0.49
USP35-207ENST00000530546 ARHGEF18Q6ZSZ5 1173 aa11.99□□□□□ -0.49
USP35-207ENST00000530546 CCDC33Q8N5R6 958 aa11.99□□□□□ -0.49
USP35-207ENST00000530546 LRRC52Q8N7C0 313 aa11.99□□□□□ -0.49
USP35-207ENST00000530546 ARRDC4Q8NCT1 418 aa11.99□□□□□ -0.49
USP35-207ENST00000530546 PHC3Q8NDX5 983 aa11.99□□□□□ -0.49
USP35-207ENST00000530546 TBC1D10AQ9BXI6 508 aa11.99□□□□□ -0.49
USP35-207ENST00000530546 CNTN3Q9P232 1028 aa11.99□□□□□ -0.49
USP35-207ENST00000530546 DNAH12Q6ZR08 3092 aa11.99□□□□□ -0.49
USP35-207ENST00000530546 ZSWIM8A7E2V4 1837 aa11.99□□□□□ -0.49
USP35-207ENST00000530546 TCRBV7S3A2A0A539 114 aa11.99□□□□□ -0.49
USP35-207ENST00000530546 MYADML2A6NDP7 307 aa11.99□□□□□ -0.49
USP35-207ENST00000530546 KPNA7A9QM74 516 aa11.99□□□□□ -0.49
USP35-207ENST00000530546 TNPO2O14787 897 aaKnown RBP11.99□□□□□ -0.49
USP35-207ENST00000530546 BRAFP15056 766 aa11.99□□□□□ -0.49
USP35-207ENST00000530546 IGFBP6P24592 240 aaPredicted RBP11.99□□□□□ -0.49
USP35-207ENST00000530546 SLC6A3Q01959 620 aa11.99□□□□□ -0.49
USP35-207ENST00000530546 STILQ15468 1287 aa11.99□□□□□ -0.49
USP35-207ENST00000530546 FSCN1Q16658 493 aaKnown RBP11.99□□□□□ -0.49
USP35-207ENST00000530546 CA9Q16790 459 aa11.99□□□□□ -0.49
USP35-207ENST00000530546 UBXN11Q5T124 520 aa11.99□□□□□ -0.49
USP35-207ENST00000530546 CYP4V2Q6ZWL3 525 aaPredicted RBP11.99□□□□□ -0.49
USP35-207ENST00000530546 RASAL3Q86YV0 1011 aa11.99□□□□□ -0.49
USP35-207ENST00000530546 GDAP1Q8TB36 358 aa11.99□□□□□ -0.49
USP35-207ENST00000530546 NDRG1Q92597 394 aaKnown RBP11.99□□□□□ -0.49
USP35-207ENST00000530546 GATA6Q92908 595 aa11.99□□□□□ -0.49
USP35-207ENST00000530546 LRRC37BQ96QE4 947 aa11.99□□□□□ -0.49
USP35-207ENST00000530546 TLE6Q9H808 572 aa11.99□□□□□ -0.49
USP35-207ENST00000530546 RSAD1Q9HA92 442 aa11.99□□□□□ -0.49
USP35-207ENST00000530546 IPPQ9Y573 584 aa11.99□□□□□ -0.49
USP35-207ENST00000530546 USH1CQ9Y6N9 552 aa11.99□□□□□ -0.49
USP35-207ENST00000530546 APOC4-APOC2K7ER74 178 aa11.98□□□□□ -0.49
USP35-207ENST00000530546 APOC2P02655 101 aa11.98□□□□□ -0.49
USP35-207ENST00000530546 CTSHP09668 335 aa11.98□□□□□ -0.49
USP35-207ENST00000530546 ACAT1P24752 427 aaKnown RBP11.98□□□□□ -0.49
USP35-207ENST00000530546 TPP2P29144 1249 aaPredicted RBP11.98□□□□□ -0.49
USP35-207ENST00000530546 DPYSL3Q14195 570 aa11.98□□□□□ -0.49
USP35-207ENST00000530546 ALKAL1Q6UXT8 129 aa11.98□□□□□ -0.49
USP35-207ENST00000530546 CENPUQ71F23 418 aa11.98□□□□□ -0.49
USP35-207ENST00000530546 SLC2A14Q8TDB8 520 aa11.98□□□□□ -0.49
USP35-207ENST00000530546 SLC35F5Q8WV83 523 aa11.98□□□□□ -0.49
USP35-207ENST00000530546 KBTBD7Q8WVZ9 684 aa11.98□□□□□ -0.49
USP35-207ENST00000530546 ERP27Q96DN0 273 aa11.98□□□□□ -0.49
USP35-207ENST00000530546 ZFP42Q96MM3 310 aa11.98□□□□□ -0.49
USP35-207ENST00000530546 NR1H4Q96RI1 486 aaPredicted RBP11.98□□□□□ -0.49
USP35-207ENST00000530546 MAGEB5Q9BZ81 275 aa11.98□□□□□ -0.49
USP35-207ENST00000530546 MMADHCQ9H3L0 296 aaPredicted RBP11.98□□□□□ -0.49
USP35-207ENST00000530546 EFR3BQ9Y2G0 817 aa11.98□□□□□ -0.49
USP35-207ENST00000530546 STARD13Q9Y3M8 1113 aa11.98□□□□□ -0.49
USP35-207ENST00000530546 SMAPO00193 183 aa11.98□□□□□ -0.49
USP35-207ENST00000530546 RARBP10826 455 aa11.98□□□□□ -0.49
USP35-207ENST00000530546 STX2P32856 288 aa11.98□□□□□ -0.49
USP35-207ENST00000530546 ADAM17P78536 824 aa11.98□□□□□ -0.49
USP35-207ENST00000530546 STAT4Q14765 748 aa11.98□□□□□ -0.49
USP35-207ENST00000530546 ACAP1Q15027 740 aa11.98□□□□□ -0.49
USP35-207ENST00000530546 CCDC6Q16204 474 aa11.98□□□□□ -0.49
USP35-207ENST00000530546 TAZQ16635 292 aa11.98□□□□□ -0.49
USP35-207ENST00000530546 HIF1AQ16665 826 aa11.98□□□□□ -0.49
USP35-207ENST00000530546 BBS9Q3SYG4 887 aa11.98□□□□□ -0.49
USP35-207ENST00000530546 PKDCCQ504Y2 493 aa11.98□□□□□ -0.49
USP35-207ENST00000530546 CPT1BQ92523 772 aa11.98□□□□□ -0.49
USP35-207ENST00000530546 KHSRPQ92945 711 aaKnown RBP eCLIP11.98□□□□□ -0.49
USP35-207ENST00000530546 SLC4A5Q9BY07 1137 aa11.98□□□□□ -0.49
USP35-207ENST00000530546 DENND2DQ9H6A0 471 aaPredicted RBP11.98□□□□□ -0.49
USP35-207ENST00000530546 COMMD3-BMI1R4GMX3 469 aa11.98□□□□□ -0.49
USP35-207ENST00000530546 MEIS3P2A8K0S8 358 aa11.97□□□□□ -0.49
USP35-207ENST00000530546 H0Y3Z8 333 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms