RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 PXDC1Q5TGL8 231 aa4.01□□□□□ -1.77
HMGB1P29-201ENST00000505659 HIBCHQ6NVY1 386 aaPredicted RBP4.01□□□□□ -1.77
HMGB1P29-201ENST00000505659 CCAR1Q8IX12 1150 aaKnown RBP4.01□□□□□ -1.77
HMGB1P29-201ENST00000505659 C8orf48Q96LL4 319 aa4.01□□□□□ -1.77
HMGB1P29-201ENST00000505659 CINPQ9BW66 212 aaPredicted RBP4.01□□□□□ -1.77
HMGB1P29-201ENST00000505659 ADGRE3Q9BY15 652 aa4.01□□□□□ -1.77
HMGB1P29-201ENST00000505659 MAGEB5Q9BZ81 275 aa4.01□□□□□ -1.77
HMGB1P29-201ENST00000505659 PCDHAC1Q9H158 963 aa4.01□□□□□ -1.77
HMGB1P29-201ENST00000505659 ABHD10Q9NUJ1 306 aa4.01□□□□□ -1.77
HMGB1P29-201ENST00000505659 ZMYND8Q9ULU4 1186 aaPredicted RBP4.01□□□□□ -1.77
HMGB1P29-201ENST00000505659 MAN2B2Q9Y2E5 1009 aa4.01□□□□□ -1.77
HMGB1P29-201ENST00000505659 AREL1O15033 823 aa4□□□□□ -1.77
HMGB1P29-201ENST00000505659 KCNQ3O43525 872 aa4□□□□□ -1.77
HMGB1P29-201ENST00000505659 BMP15O95972 392 aa4□□□□□ -1.77
HMGB1P29-201ENST00000505659 MYL4P12829 197 aa4□□□□□ -1.77
HMGB1P29-201ENST00000505659 TRIM27P14373 513 aa4□□□□□ -1.77
HMGB1P29-201ENST00000505659 JAK3P52333 1124 aa4□□□□□ -1.77
HMGB1P29-201ENST00000505659 KCNJ12Q14500 433 aa4□□□□□ -1.77
HMGB1P29-201ENST00000505659 C10orf25Q5T742 122 aa4□□□□□ -1.77
HMGB1P29-201ENST00000505659 FAM90A2PQ658T7 463 aa4□□□□□ -1.77
HMGB1P29-201ENST00000505659 TECPR1Q7Z6L1 1165 aa4□□□□□ -1.77
HMGB1P29-201ENST00000505659 PIP4P1Q86T03 277 aa4□□□□□ -1.77
HMGB1P29-201ENST00000505659 C16orf71Q8IYS4 520 aaPredicted RBP4□□□□□ -1.77
HMGB1P29-201ENST00000505659 C16orf52Q8NHV5 167 aa4□□□□□ -1.77
HMGB1P29-201ENST00000505659 PARD3BQ8TEW8 1205 aa4□□□□□ -1.77
HMGB1P29-201ENST00000505659 WIPF2Q8TF74 440 aaPredicted RBP4□□□□□ -1.77
HMGB1P29-201ENST00000505659 CUL5Q93034 780 aa4□□□□□ -1.77
HMGB1P29-201ENST00000505659 GDF15Q99988 308 aa4□□□□□ -1.77
HMGB1P29-201ENST00000505659 SCNM1Q9BWG6 230 aa4□□□□□ -1.77
HMGB1P29-201ENST00000505659 NUAK2Q9H093 628 aa4□□□□□ -1.77
HMGB1P29-201ENST00000505659 ZCWPW1Q9H0M4 648 aa4□□□□□ -1.77
HMGB1P29-201ENST00000505659 ZBTB26Q9HCK0 441 aa4□□□□□ -1.77
HMGB1P29-201ENST00000505659 AGO4Q9HCK5 861 aaKnown RBP4□□□□□ -1.77
HMGB1P29-201ENST00000505659 TMEM8AQ9HCN3 771 aa4□□□□□ -1.77
HMGB1P29-201ENST00000505659 SEMA5BQ9P283 1151 aa4□□□□□ -1.77
HMGB1P29-201ENST00000505659 SIRT4Q9Y6E7 314 aaPredicted RBP4□□□□□ -1.77
HMGB1P29-201ENST00000505659 FAM234BA2RU67 622 aa3.99□□□□□ -1.77
HMGB1P29-201ENST00000505659 M0QZQ0 153 aa3.99□□□□□ -1.77
HMGB1P29-201ENST00000505659 PRYO14603 147 aa3.99□□□□□ -1.77
HMGB1P29-201ENST00000505659 INPPL1O15357 1258 aa3.99□□□□□ -1.77
HMGB1P29-201ENST00000505659 CCNT2O60583 730 aaKnown RBP3.99□□□□□ -1.77
HMGB1P29-201ENST00000505659 COQ9O75208 318 aa3.99□□□□□ -1.77
HMGB1P29-201ENST00000505659 FGBP02675 491 aa3.99□□□□□ -1.77
HMGB1P29-201ENST00000505659 ALADP13716 330 aa3.99□□□□□ -1.77
HMGB1P29-201ENST00000505659 TNFSF4P23510 183 aa3.99□□□□□ -1.77
HMGB1P29-201ENST00000505659 TACR3P29371 465 aa3.99□□□□□ -1.77
HMGB1P29-201ENST00000505659 IDUAP35475 653 aa3.99□□□□□ -1.77
HMGB1P29-201ENST00000505659 GNALP38405 381 aa3.99□□□□□ -1.77
HMGB1P29-201ENST00000505659 VPS41P49754 854 aa3.99□□□□□ -1.77
HMGB1P29-201ENST00000505659 IFIT5Q13325 482 aaKnown RBP3.99□□□□□ -1.77
HMGB1P29-201ENST00000505659 PFKFB3Q16875 520 aaPredicted RBP3.99□□□□□ -1.77
HMGB1P29-201ENST00000505659 LONRF1Q17RB8 773 aa3.99□□□□□ -1.77
HMGB1P29-201ENST00000505659 SLC35G1Q2M3R5 365 aa3.99□□□□□ -1.77
HMGB1P29-201ENST00000505659 ZNF260Q3ZCT1 412 aa3.99□□□□□ -1.77
HMGB1P29-201ENST00000505659 EEF1AKMT2Q5JPI9 291 aaKnown RBP3.99□□□□□ -1.77
HMGB1P29-201ENST00000505659 LCE1AQ5T7P2 110 aa3.99□□□□□ -1.77
HMGB1P29-201ENST00000505659 AWAT2Q6E213 333 aa3.99□□□□□ -1.77
HMGB1P29-201ENST00000505659 MRNIPQ6NTE8 343 aa3.99□□□□□ -1.77
HMGB1P29-201ENST00000505659 KSR2Q6VAB6 950 aa3.99□□□□□ -1.77
HMGB1P29-201ENST00000505659 BEND5Q7L4P6 421 aa3.99□□□□□ -1.77
HMGB1P29-201ENST00000505659 IRF2BP2Q7Z5L9 587 aa3.99□□□□□ -1.77
HMGB1P29-201ENST00000505659 TXLNBQ8N3L3 684 aa3.99□□□□□ -1.77
HMGB1P29-201ENST00000505659 C9orf106Q8NAJ2 232 aa3.99□□□□□ -1.77
HMGB1P29-201ENST00000505659 GLIS1Q8NBF1 620 aa3.99□□□□□ -1.77
HMGB1P29-201ENST00000505659 PJA1Q8NG27 643 aa3.99□□□□□ -1.77
HMGB1P29-201ENST00000505659 ABHD5Q8WTS1 349 aa3.99□□□□□ -1.77
HMGB1P29-201ENST00000505659 FCRL5Q96RD9 977 aa3.99□□□□□ -1.77
HMGB1P29-201ENST00000505659 ARL8BQ9NVJ2 186 aa3.99□□□□□ -1.77
HMGB1P29-201ENST00000505659 HEY2Q9UBP5 337 aa3.99□□□□□ -1.77
HMGB1P29-201ENST00000505659 CCDC187A0A096LP49 1063 aa3.98□□□□□ -1.77
HMGB1P29-201ENST00000505659 LY6G6EA0A0G2JKS1 128 aa3.98□□□□□ -1.77
HMGB1P29-201ENST00000505659 SLC22A23A1A5C7 686 aa3.98□□□□□ -1.77
HMGB1P29-201ENST00000505659 C2CD4BA6NLJ0 364 aa3.98□□□□□ -1.77
HMGB1P29-201ENST00000505659 SOCS2O14508 198 aa3.98□□□□□ -1.77
HMGB1P29-201ENST00000505659 ZSCAN9O15535 394 aaPredicted RBP3.98□□□□□ -1.77
HMGB1P29-201ENST00000505659 TLR2O60603 784 aa3.98□□□□□ -1.77
HMGB1P29-201ENST00000505659 PLAUP00749 431 aa3.98□□□□□ -1.77
HMGB1P29-201ENST00000505659 CTSAP10619 480 aa3.98□□□□□ -1.77
HMGB1P29-201ENST00000505659 ST6GAL1P15907 406 aa3.98□□□□□ -1.77
HMGB1P29-201ENST00000505659 NDUFS1P28331 727 aa3.98□□□□□ -1.77
HMGB1P29-201ENST00000505659 SLC5A2P31639 672 aa3.98□□□□□ -1.77
HMGB1P29-201ENST00000505659 DGKQP52824 942 aa3.98□□□□□ -1.77
HMGB1P29-201ENST00000505659 ID2Q02363 134 aa3.98□□□□□ -1.77
HMGB1P29-201ENST00000505659 FAM209BQ5JX69 171 aa3.98□□□□□ -1.77
HMGB1P29-201ENST00000505659 PIK3AP1Q6ZUJ8 805 aa3.98□□□□□ -1.77
HMGB1P29-201ENST00000505659 KRT73Q86Y46 540 aa3.98□□□□□ -1.77
HMGB1P29-201ENST00000505659 CCDC150Q8NCX0 1101 aa3.98□□□□□ -1.77
HMGB1P29-201ENST00000505659 ZNF548Q8NEK5 533 aaPredicted RBP3.98□□□□□ -1.77
HMGB1P29-201ENST00000505659 PIGOQ8TEQ8 1089 aa3.98□□□□□ -1.77
HMGB1P29-201ENST00000505659 GRAMD1AQ96CP6 724 aa3.98□□□□□ -1.77
HMGB1P29-201ENST00000505659 TRMT61AQ96FX7 289 aaKnown RBP3.98□□□□□ -1.77
HMGB1P29-201ENST00000505659 RIPOR3Q96MK2 946 aa3.98□□□□□ -1.77
HMGB1P29-201ENST00000505659 COLEC11Q9BWP8 271 aa3.98□□□□□ -1.77
HMGB1P29-201ENST00000505659 DDX24Q9GZR7 859 aaKnown RBP eCLIP3.98□□□□□ -1.77
HMGB1P29-201ENST00000505659 FSCN3Q9NQT6 498 aa3.98□□□□□ -1.77
HMGB1P29-201ENST00000505659 STARD7Q9NQZ5 370 aa3.98□□□□□ -1.77
HMGB1P29-201ENST00000505659 ASNSD1Q9NWL6 643 aa3.98□□□□□ -1.77
HMGB1P29-201ENST00000505659 RGL1Q9NZL6 768 aa3.98□□□□□ -1.77
HMGB1P29-201ENST00000505659 TMOD4Q9NZQ9 345 aa3.98□□□□□ -1.77
HMGB1P29-201ENST00000505659 FNIP2Q9P278 1114 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms