RNA–Protein interactions for RNA: ENST00000496805.5

PEF1-208, Transcript of penta-EF-hand domain containing 1, human

TSL 5

Gene PEF1, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PEF1-208	ENST00000496805	ABCB4	P21439	1286 aa		13.55	□□□□□ -0.24
PEF1-208	ENST00000496805	MMP8	P22894	467 aa		13.55	□□□□□ -0.24
PEF1-208	ENST00000496805	SOX9	P48436	509 aa		13.55	□□□□□ -0.24
PEF1-208	ENST00000496805	HADHB	P55084	474 aa	Known RBP	13.55	□□□□□ -0.24
PEF1-208	ENST00000496805	USP41	Q3LFD5	358 aa		13.55	□□□□□ -0.24
PEF1-208	ENST00000496805	DENND1B	Q6P3S1	775 aa		13.55	□□□□□ -0.24
PEF1-208	ENST00000496805	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	13.55	□□□□□ -0.24
PEF1-208	ENST00000496805	C1orf131	Q8NDD1	294 aa	Known RBP	13.55	□□□□□ -0.24
PEF1-208	ENST00000496805	TRIM58	Q8NG06	486 aa		13.55	□□□□□ -0.24
PEF1-208	ENST00000496805	IPO4	Q8TEX9	1081 aa	Known RBP	13.55	□□□□□ -0.24
PEF1-208	ENST00000496805	ELSPBP1	Q96BH3	223 aa		13.55	□□□□□ -0.24
PEF1-208	ENST00000496805	CYFIP2	Q96F07	1278 aa		13.55	□□□□□ -0.24
PEF1-208	ENST00000496805	LOXL4	Q96JB6	756 aa		13.55	□□□□□ -0.24
PEF1-208	ENST00000496805	MIS12	Q9H081	205 aa		13.55	□□□□□ -0.24
PEF1-208	ENST00000496805	THAP2	Q9H0W7	228 aa		13.55	□□□□□ -0.24
PEF1-208	ENST00000496805	DPEP3	Q9H4B8	488 aa		13.55	□□□□□ -0.24
PEF1-208	ENST00000496805	ZNF334	Q9HCZ1	680 aa	Predicted RBP	13.55	□□□□□ -0.24
PEF1-208	ENST00000496805	FAM49B	Q9NUQ9	324 aa		13.55	□□□□□ -0.24
PEF1-208	ENST00000496805	UVRAG	Q9P2Y5	699 aa		13.55	□□□□□ -0.24
PEF1-208	ENST00000496805	TSPAN16	Q9UKR8	245 aa		13.55	□□□□□ -0.24
PEF1-208	ENST00000496805	STRIP2	Q9ULQ0	834 aa		13.55	□□□□□ -0.24
PEF1-208	ENST00000496805	TFR2	Q9UP52	801 aa		13.55	□□□□□ -0.24
PEF1-208	ENST00000496805	NEUROG3	Q9Y4Z2	214 aa		13.55	□□□□□ -0.24
PEF1-208	ENST00000496805	ASXL3	Q9C0F0	2248 aa		13.55	□□□□□ -0.24
PEF1-208	ENST00000496805	NUP210	Q8TEM1	1887 aa	Predicted RBP	13.55	□□□□□ -0.24
PEF1-208	ENST00000496805	PI4KA	P42356	2102 aa		13.54	□□□□□ -0.24
PEF1-208	ENST00000496805	XYLB	O75191	536 aa		13.54	□□□□□ -0.24
PEF1-208	ENST00000496805	TADA2A	O75478	443 aa		13.54	□□□□□ -0.24
PEF1-208	ENST00000496805	RPP40	O75818	363 aa	Known RBP	13.54	□□□□□ -0.24
PEF1-208	ENST00000496805	MTA2	O94776	668 aa		13.54	□□□□□ -0.24
PEF1-208	ENST00000496805	CAPNS1	P04632	268 aa		13.54	□□□□□ -0.24
PEF1-208	ENST00000496805	CYP1A2	P05177	515 aa		13.54	□□□□□ -0.24
PEF1-208	ENST00000496805	TNNT1	P13805	278 aa		13.54	□□□□□ -0.24
PEF1-208	ENST00000496805	IGFBP6	P24592	240 aa	Predicted RBP	13.54	□□□□□ -0.24
PEF1-208	ENST00000496805	HOXA9	P31269	272 aa		13.54	□□□□□ -0.24
PEF1-208	ENST00000496805	GSC	P56915	257 aa	Predicted RBP	13.54	□□□□□ -0.24
PEF1-208	ENST00000496805	GNG11	P61952	73 aa		13.54	□□□□□ -0.24
PEF1-208	ENST00000496805	PSMC1	P62191	440 aa	Known RBP	13.54	□□□□□ -0.24
PEF1-208	ENST00000496805	TSPY1	Q01534	308 aa		13.54	□□□□□ -0.24
PEF1-208	ENST00000496805	YWHAH	Q04917	246 aa	Predicted RBP	13.54	□□□□□ -0.24
PEF1-208	ENST00000496805	PDCL	Q13371	301 aa		13.54	□□□□□ -0.24
PEF1-208	ENST00000496805	MAPRE1	Q15691	268 aa	Known RBP	13.54	□□□□□ -0.24
PEF1-208	ENST00000496805	INTS6L	Q5JSJ4	861 aa	Known RBP	13.54	□□□□□ -0.24
PEF1-208	ENST00000496805	PKN3	Q6P5Z2	889 aa		13.54	□□□□□ -0.24
PEF1-208	ENST00000496805	VIT	Q6UXI7	678 aa		13.54	□□□□□ -0.24
PEF1-208	ENST00000496805	MCOLN2	Q8IZK6	566 aa		13.54	□□□□□ -0.24
PEF1-208	ENST00000496805	THEM5	Q8N1Q8	247 aa		13.54	□□□□□ -0.24
PEF1-208	ENST00000496805	DEFB124	Q8NES8	71 aa		13.54	□□□□□ -0.24
PEF1-208	ENST00000496805	GAB3	Q8WWW8	586 aa		13.54	□□□□□ -0.24
PEF1-208	ENST00000496805	ACBD6	Q9BR61	282 aa		13.54	□□□□□ -0.24
PEF1-208	ENST00000496805	C11orf70	Q9BRQ4	267 aa		13.54	□□□□□ -0.24
PEF1-208	ENST00000496805	RRAGD	Q9NQL2	400 aa	Predicted RBP	13.54	□□□□□ -0.24
PEF1-208	ENST00000496805	ADAM22	Q9P0K1	906 aa		13.54	□□□□□ -0.24
PEF1-208	ENST00000496805	MRPS23	Q9Y3D9	190 aa	Known RBP	13.54	□□□□□ -0.24
PEF1-208	ENST00000496805	SCIN	Q9Y6U3	715 aa		13.54	□□□□□ -0.24
PEF1-208	ENST00000496805	LNP1	A1A4G5	178 aa		13.53	□□□□□ -0.24
PEF1-208	ENST00000496805	OAZ2	O95190	189 aa		13.53	□□□□□ -0.24
PEF1-208	ENST00000496805	PRB1	P04280	392 aa		13.53	□□□□□ -0.24
PEF1-208	ENST00000496805	CCDC130	P13994	396 aa		13.53	□□□□□ -0.24
PEF1-208	ENST00000496805	PTPN1	P18031	435 aa	Known RBP	13.53	□□□□□ -0.24
PEF1-208	ENST00000496805	LMO2	P25791	158 aa		13.53	□□□□□ -0.24
PEF1-208	ENST00000496805	GDI1	P31150	447 aa		13.53	□□□□□ -0.24
PEF1-208	ENST00000496805	SLC8A3	P57103	927 aa		13.53	□□□□□ -0.24
PEF1-208	ENST00000496805	SNX16	P57768	344 aa		13.53	□□□□□ -0.24
PEF1-208	ENST00000496805	BST2	Q10589	180 aa	Known RBP	13.53	□□□□□ -0.24
PEF1-208	ENST00000496805	PTP4A2	Q12974	167 aa		13.53	□□□□□ -0.24
PEF1-208	ENST00000496805	PKDCC	Q504Y2	493 aa		13.53	□□□□□ -0.24
PEF1-208	ENST00000496805	FAM78A	Q5JUQ0	283 aa		13.53	□□□□□ -0.24
PEF1-208	ENST00000496805	ZNF569	Q5MCW4	686 aa		13.53	□□□□□ -0.24
PEF1-208	ENST00000496805	PPP1R26	Q5T8A7	1209 aa	Predicted RBP	13.53	□□□□□ -0.24
PEF1-208	ENST00000496805	ZNF280D	Q6N043	979 aa		13.53	□□□□□ -0.24
PEF1-208	ENST00000496805	TXNDC11	Q6PKC3	985 aa		13.53	□□□□□ -0.24
PEF1-208	ENST00000496805	MMS22L	Q6ZRQ5	1243 aa		13.53	□□□□□ -0.24
PEF1-208	ENST00000496805	C12orf29	Q8N999	325 aa		13.53	□□□□□ -0.24
PEF1-208	ENST00000496805	MYCBPAP	Q8TBZ2	947 aa		13.53	□□□□□ -0.24
PEF1-208	ENST00000496805	CPA5	Q8WXQ8	436 aa		13.53	□□□□□ -0.24
PEF1-208	ENST00000496805	ARHGEF26	Q96DR7	871 aa		13.53	□□□□□ -0.24
PEF1-208	ENST00000496805	TCEAL4	Q96EI5	215 aa		13.53	□□□□□ -0.24
PEF1-208	ENST00000496805	HNRNPAB	Q99729	332 aa	Known RBP	13.53	□□□□□ -0.24
PEF1-208	ENST00000496805	OXCT2	Q9BYC2	517 aa	Predicted RBP	13.53	□□□□□ -0.24
PEF1-208	ENST00000496805	CYLD	Q9NQC7	956 aa		13.53	□□□□□ -0.24
PEF1-208	ENST00000496805	VPS45	Q9NRW7	570 aa		13.53	□□□□□ -0.24
PEF1-208	ENST00000496805	CNOT8	Q9UFF9	292 aa	Known RBP	13.53	□□□□□ -0.24
PEF1-208	ENST00000496805	MSRB2	Q9Y3D2	182 aa		13.53	□□□□□ -0.24
PEF1-208	ENST00000496805	CAPN6	Q9Y6Q1	641 aa		13.53	□□□□□ -0.24
PEF1-208	ENST00000496805	DUSP10	Q9Y6W6	482 aa		13.53	□□□□□ -0.24
PEF1-208	ENST00000496805	HECTD1	Q9ULT8	2610 aa		13.53	□□□□□ -0.24
PEF1-208	ENST00000496805	MYH10	P35580	1976 aa		13.52	□□□□□ -0.24
PEF1-208	ENST00000496805	OR6C75	A6NL08	312 aa		13.52	□□□□□ -0.25
PEF1-208	ENST00000496805	HCRT	O43612	131 aa		13.52	□□□□□ -0.25
PEF1-208	ENST00000496805	MOCS3	O95396	460 aa		13.52	□□□□□ -0.25
PEF1-208	ENST00000496805	ABL1	P00519	1130 aa		13.52	□□□□□ -0.25
PEF1-208	ENST00000496805	RHO	P08100	348 aa		13.52	□□□□□ -0.25
PEF1-208	ENST00000496805	PDGFRB	P09619	1106 aa		13.52	□□□□□ -0.25
PEF1-208	ENST00000496805	CEACAM1	P13688	526 aa		13.52	□□□□□ -0.25
PEF1-208	ENST00000496805	FGFR3	P22607	806 aa		13.52	□□□□□ -0.25
PEF1-208	ENST00000496805	ACAT1	P24752	427 aa	Known RBP	13.52	□□□□□ -0.25
PEF1-208	ENST00000496805	TKT	P29401	623 aa	Known RBP	13.52	□□□□□ -0.25
PEF1-208	ENST00000496805	CREM	Q03060	361 aa		13.52	□□□□□ -0.25
PEF1-208	ENST00000496805	PSMD5	Q16401	504 aa		13.52	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 63 ms