RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 PIGZQ86VD9 579 aa14.22□□□□□ -0.13
BRAT1-203ENST00000467558 HELQQ8TDG4 1101 aa14.22□□□□□ -0.13
BRAT1-203ENST00000467558 KLC4Q9NSK0 619 aa14.22□□□□□ -0.13
BRAT1-203ENST00000467558 ST3GAL5Q9UNP4 418 aa14.22□□□□□ -0.13
BRAT1-203ENST00000467558 ATP11BQ9Y2G3 1177 aa14.22□□□□□ -0.13
BRAT1-203ENST00000467558 TRIM17Q9Y577 477 aa14.22□□□□□ -0.13
BRAT1-203ENST00000467558 PEX10O60683 326 aa14.22□□□□□ -0.13
BRAT1-203ENST00000467558 C4BPAP04003 597 aaKnown RBP14.22□□□□□ -0.13
BRAT1-203ENST00000467558 AKT1P31749 480 aa14.22□□□□□ -0.13
BRAT1-203ENST00000467558 RPL9P32969 192 aaKnown RBP14.22□□□□□ -0.13
BRAT1-203ENST00000467558 MARCKSL1P49006 195 aa14.22□□□□□ -0.13
BRAT1-203ENST00000467558 RENBPP51606 427 aa14.22□□□□□ -0.13
BRAT1-203ENST00000467558 EPHB3P54753 998 aa14.22□□□□□ -0.13
BRAT1-203ENST00000467558 DNAL1Q4LDG9 190 aa14.22□□□□□ -0.13
BRAT1-203ENST00000467558 MARC1Q5VT66 337 aa14.22□□□□□ -0.13
BRAT1-203ENST00000467558 ADAM32Q8TC27 787 aa14.22□□□□□ -0.13
BRAT1-203ENST00000467558 C18orf25Q96B23 403 aaPredicted RBP14.22□□□□□ -0.13
BRAT1-203ENST00000467558 PGM2Q96G03 612 aa14.22□□□□□ -0.13
BRAT1-203ENST00000467558 FAM84AQ96KN4 292 aa14.22□□□□□ -0.13
BRAT1-203ENST00000467558 TRPM3Q9HCF6 1732 aaPredicted RBP14.22□□□□□ -0.13
BRAT1-203ENST00000467558 E2F8A0AVK6 867 aa14.21□□□□□ -0.13
BRAT1-203ENST00000467558 TMCC1O94876 653 aa14.21□□□□□ -0.13
BRAT1-203ENST00000467558 IL1RL1Q01638 556 aa14.21□□□□□ -0.13
BRAT1-203ENST00000467558 SATB1Q01826 763 aa14.21□□□□□ -0.13
BRAT1-203ENST00000467558 RBBP7Q16576 425 aa14.21□□□□□ -0.13
BRAT1-203ENST00000467558 ZCCHC9Q8N567 271 aaKnown RBP14.21□□□□□ -0.13
BRAT1-203ENST00000467558 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.21□□□□□ -0.13
BRAT1-203ENST00000467558 UROC1Q96N76 676 aa14.21□□□□□ -0.13
BRAT1-203ENST00000467558 CDH9Q9ULB4 789 aa14.21□□□□□ -0.13
BRAT1-203ENST00000467558 PHTF1Q9UMS5 762 aa14.21□□□□□ -0.13
BRAT1-203ENST00000467558 FSCN2O14926 492 aa14.21□□□□□ -0.13
BRAT1-203ENST00000467558 RTN3O95197 1032 aaPredicted RBP14.21□□□□□ -0.13
BRAT1-203ENST00000467558 USP17L7P0C7H9 530 aa14.21□□□□□ -0.13
BRAT1-203ENST00000467558 MMP8P22894 467 aa14.21□□□□□ -0.13
BRAT1-203ENST00000467558 SERPINB8P50452 374 aa14.21□□□□□ -0.13
BRAT1-203ENST00000467558 POLD3Q15054 466 aaPredicted RBP14.21□□□□□ -0.13
BRAT1-203ENST00000467558 PGLYRP2Q96PD5 576 aa14.21□□□□□ -0.13
BRAT1-203ENST00000467558 VAT1Q99536 393 aa14.21□□□□□ -0.13
BRAT1-203ENST00000467558 SUDS3Q9H7L9 328 aaPredicted RBP14.21□□□□□ -0.13
BRAT1-203ENST00000467558 NINJ2Q9NZG7 142 aa14.21□□□□□ -0.13
BRAT1-203ENST00000467558 VANGL2Q9ULK5 521 aa14.21□□□□□ -0.13
BRAT1-203ENST00000467558 YBX3P16989 372 aaKnown RBP eCLIP14.21□□□□□ -0.13
BRAT1-203ENST00000467558 HMOX2P30519 316 aa14.21□□□□□ -0.13
BRAT1-203ENST00000467558 HADHAP40939 763 aa14.21□□□□□ -0.13
BRAT1-203ENST00000467558 JAG1P78504 1218 aa14.21□□□□□ -0.13
BRAT1-203ENST00000467558 ENPEPQ07075 957 aa14.21□□□□□ -0.13
BRAT1-203ENST00000467558 ZRANB3Q5FWF4 1079 aa14.21□□□□□ -0.13
BRAT1-203ENST00000467558 AGAP9Q5VTM2 703 aa14.21□□□□□ -0.13
BRAT1-203ENST00000467558 FAM183BPQ6ZVS7 135 aa14.21□□□□□ -0.13
BRAT1-203ENST00000467558 MIPOL1Q8TD10 442 aa14.21□□□□□ -0.13
BRAT1-203ENST00000467558 CELF6Q96J87 481 aaKnown RBP14.21□□□□□ -0.13
BRAT1-203ENST00000467558 PCDHB18PQ96TA0 734 aa14.21□□□□□ -0.13
BRAT1-203ENST00000467558 UBXN6Q9BZV1 441 aa14.21□□□□□ -0.13
BRAT1-203ENST00000467558 KCNK1O00180 336 aa14.21□□□□□ -0.14
BRAT1-203ENST00000467558 ANP32DO95626 131 aa14.21□□□□□ -0.14
BRAT1-203ENST00000467558 RALBP11234 206 aa14.21□□□□□ -0.14
BRAT1-203ENST00000467558 CHRM3P20309 590 aa14.21□□□□□ -0.14
BRAT1-203ENST00000467558 CDH17Q12864 832 aa14.21□□□□□ -0.14
BRAT1-203ENST00000467558 DEFB115Q30KQ5 88 aa14.21□□□□□ -0.14
BRAT1-203ENST00000467558 PRUNE1Q86TP1 453 aa14.21□□□□□ -0.14
BRAT1-203ENST00000467558 BHMTQ93088 406 aa14.21□□□□□ -0.14
BRAT1-203ENST00000467558 CMTM5Q96DZ9 223 aa14.21□□□□□ -0.14
BRAT1-203ENST00000467558 LHX5Q9H2C1 402 aa14.21□□□□□ -0.14
BRAT1-203ENST00000467558 RNF103O00237 685 aa14.2□□□□□ -0.14
BRAT1-203ENST00000467558 RHOBTB1O94844 696 aa14.2□□□□□ -0.14
BRAT1-203ENST00000467558 RBL1P28749 1068 aa14.2□□□□□ -0.14
BRAT1-203ENST00000467558 TUFMP49411 452 aaKnown RBP14.2□□□□□ -0.14
BRAT1-203ENST00000467558 FLT3LGP49771 235 aa14.2□□□□□ -0.14
BRAT1-203ENST00000467558 TUBP50607 506 aa14.2□□□□□ -0.14
BRAT1-203ENST00000467558 MPP3Q13368 585 aa14.2□□□□□ -0.14
BRAT1-203ENST00000467558 DPYSL3Q14195 570 aa14.2□□□□□ -0.14
BRAT1-203ENST00000467558 ATP13A4Q4VNC1 1196 aa14.2□□□□□ -0.14
BRAT1-203ENST00000467558 SLC39A12Q504Y0 691 aa14.2□□□□□ -0.14
BRAT1-203ENST00000467558 BBS12Q6ZW61 710 aa14.2□□□□□ -0.14
BRAT1-203ENST00000467558 C7orf43Q8WVR3 580 aa14.2□□□□□ -0.14
BRAT1-203ENST00000467558 ALG3Q92685 438 aa14.2□□□□□ -0.14
BRAT1-203ENST00000467558 CCDC124Q96CT7 223 aaKnown RBP14.2□□□□□ -0.14
BRAT1-203ENST00000467558 LRRC39Q96DD0 335 aa14.2□□□□□ -0.14
BRAT1-203ENST00000467558 GIT1Q9Y2X7 761 aa14.2□□□□□ -0.14
BRAT1-203ENST00000467558 TM9SF1O15321 606 aa14.2□□□□□ -0.14
BRAT1-203ENST00000467558 RAMP2O60895 175 aa14.2□□□□□ -0.14
BRAT1-203ENST00000467558 MYO1DO94832 1006 aa14.2□□□□□ -0.14
BRAT1-203ENST00000467558 RHOCP08134 193 aa14.2□□□□□ -0.14
BRAT1-203ENST00000467558 PYGBP11216 843 aa14.2□□□□□ -0.14
BRAT1-203ENST00000467558 PRKAR2AP13861 404 aaKnown RBP14.2□□□□□ -0.14
BRAT1-203ENST00000467558 CYP2C18P33260 490 aa14.2□□□□□ -0.14
BRAT1-203ENST00000467558 STRA8Q7Z7C7 330 aa14.2□□□□□ -0.14
BRAT1-203ENST00000467558 TSEN2Q8NCE0 465 aaKnown RBP14.2□□□□□ -0.14
BRAT1-203ENST00000467558 PBXIP1Q96AQ6 731 aa14.2□□□□□ -0.14
BRAT1-203ENST00000467558 FAM167BQ9BTA0 163 aa14.2□□□□□ -0.14
BRAT1-203ENST00000467558 RNF208Q9H0X6 261 aa14.2□□□□□ -0.14
BRAT1-203ENST00000467558 NT5MQ9NPB1 228 aa14.2□□□□□ -0.14
BRAT1-203ENST00000467558 CHST12Q9NRB3 414 aa14.2□□□□□ -0.14
BRAT1-203ENST00000467558 ABCC13Q9NSE7 274 aa14.2□□□□□ -0.14
BRAT1-203ENST00000467558 TBC1D13Q9NVG8 400 aa14.2□□□□□ -0.14
BRAT1-203ENST00000467558 RBPJLQ9UBG7 517 aa14.2□□□□□ -0.14
BRAT1-203ENST00000467558 RAG1P15918 1043 aa14.2□□□□□ -0.14
BRAT1-203ENST00000467558 STMN1P16949 149 aa14.2□□□□□ -0.14
BRAT1-203ENST00000467558 SSTR1P30872 391 aa14.2□□□□□ -0.14
BRAT1-203ENST00000467558 THEMIS2Q5TEJ8 643 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms