RNA–Protein interactions for RNA: ENST00000439806.6

CPNE1-218, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-218ENST00000439806 TMEM86AQ8N2M4 240 aa10.81□□□□□ -0.68
CPNE1-218ENST00000439806 MCUQ8NE86 351 aa10.81□□□□□ -0.68
CPNE1-218ENST00000439806 TFB1MQ8WVM0 346 aaKnown RBP10.81□□□□□ -0.68
CPNE1-218ENST00000439806 KCTD13Q8WZ19 329 aa10.81□□□□□ -0.68
CPNE1-218ENST00000439806 LRRC39Q96DD0 335 aa10.81□□□□□ -0.68
CPNE1-218ENST00000439806 SENP8Q96LD8 212 aa10.81□□□□□ -0.68
CPNE1-218ENST00000439806 SYT15Q9BQS2 421 aa10.81□□□□□ -0.68
CPNE1-218ENST00000439806 ADAM33Q9BZ11 813 aa10.81□□□□□ -0.68
CPNE1-218ENST00000439806 TSPYL2Q9H2G4 693 aaPredicted RBP10.81□□□□□ -0.68
CPNE1-218ENST00000439806 SPC25Q9HBM1 224 aa10.81□□□□□ -0.68
CPNE1-218ENST00000439806 SLC40A1Q9NP59 571 aa10.81□□□□□ -0.68
CPNE1-218ENST00000439806 PNPLA8Q9NP80 782 aa10.81□□□□□ -0.68
CPNE1-218ENST00000439806 KRT82Q9NSB4 513 aa10.81□□□□□ -0.68
CPNE1-218ENST00000439806 ABCF3Q9NUQ8 709 aa10.81□□□□□ -0.68
CPNE1-218ENST00000439806 FAM105AQ9NUU6 356 aa10.81□□□□□ -0.68
CPNE1-218ENST00000439806 HAUS2Q9NVX0 235 aa10.81□□□□□ -0.68
CPNE1-218ENST00000439806 DDX43Q9NXZ2 648 aaKnown RBP10.81□□□□□ -0.68
CPNE1-218ENST00000439806 KLHL14Q9P2G3 628 aa10.81□□□□□ -0.68
CPNE1-218ENST00000439806 ZC3H7BQ9UGR2 993 aaKnown RBP10.81□□□□□ -0.68
CPNE1-218ENST00000439806 TEX264Q9Y6I9 313 aa10.81□□□□□ -0.68
CPNE1-218ENST00000439806 TSC2P49815 1807 aa10.81□□□□□ -0.68
CPNE1-218ENST00000439806 SYNJ2BP-COX16A0A087WUM0 186 aa10.8□□□□□ -0.68
CPNE1-218ENST00000439806 TCRBV9S1A1TA0A576 114 aa10.8□□□□□ -0.68
CPNE1-218ENST00000439806 MYADML2A6NDP7 307 aa10.8□□□□□ -0.68
CPNE1-218ENST00000439806 M0QYT0 321 aa10.8□□□□□ -0.68
CPNE1-218ENST00000439806 TM9SF1O15321 606 aa10.8□□□□□ -0.68
CPNE1-218ENST00000439806 TYROBPO43914 113 aa10.8□□□□□ -0.68
CPNE1-218ENST00000439806 RPLP2P05387 115 aaKnown RBP10.8□□□□□ -0.68
CPNE1-218ENST00000439806 THP07101 528 aa10.8□□□□□ -0.68
CPNE1-218ENST00000439806 APRTP07741 180 aa10.8□□□□□ -0.68
CPNE1-218ENST00000439806 CTSHP09668 335 aa10.8□□□□□ -0.68
CPNE1-218ENST00000439806 GOT1P17174 413 aa10.8□□□□□ -0.68
CPNE1-218ENST00000439806 KRT4P19013 534 aa10.8□□□□□ -0.68
CPNE1-218ENST00000439806 FDFT1P37268 417 aa10.8□□□□□ -0.68
CPNE1-218ENST00000439806 MLH1P40692 756 aa10.8□□□□□ -0.68
CPNE1-218ENST00000439806 LHX1P48742 406 aa10.8□□□□□ -0.68
CPNE1-218ENST00000439806 TKTL1P51854 596 aa10.8□□□□□ -0.68
CPNE1-218ENST00000439806 GJA9P57773 515 aa10.8□□□□□ -0.68
CPNE1-218ENST00000439806 GBE1Q04446 702 aa10.8□□□□□ -0.68
CPNE1-218ENST00000439806 CBLBQ13191 982 aa10.8□□□□□ -0.68
CPNE1-218ENST00000439806 PDK4Q16654 411 aa10.8□□□□□ -0.68
CPNE1-218ENST00000439806 KBTBD12Q3ZCT8 623 aa10.8□□□□□ -0.68
CPNE1-218ENST00000439806 DCAF6Q58WW2 860 aa10.8□□□□□ -0.68
CPNE1-218ENST00000439806 FAM133BQ5BKY9 247 aaKnown RBP10.8□□□□□ -0.68
CPNE1-218ENST00000439806 GNASQ5JWF2 1037 aa10.8□□□□□ -0.68
CPNE1-218ENST00000439806 LGSNQ5TDP6 509 aa10.8□□□□□ -0.68
CPNE1-218ENST00000439806 RNF43Q68DV7 783 aa10.8□□□□□ -0.68
CPNE1-218ENST00000439806 RGMBQ6NW40 437 aa10.8□□□□□ -0.68
CPNE1-218ENST00000439806 KCNT2Q6UVM3 1135 aa10.8□□□□□ -0.68
CPNE1-218ENST00000439806 RGS9BPQ6ZS82 235 aa10.8□□□□□ -0.68
CPNE1-218ENST00000439806 FAM35AQ86V20 835 aa10.8□□□□□ -0.68
CPNE1-218ENST00000439806 IGDCC3Q8IVU1 814 aa10.8□□□□□ -0.68
CPNE1-218ENST00000439806 CTAGE3PQ8IX95 158 aa10.8□□□□□ -0.68
CPNE1-218ENST00000439806 GBP7Q8N8V2 638 aaPredicted RBP10.8□□□□□ -0.68
CPNE1-218ENST00000439806 CCDC63Q8NA47 563 aa10.8□□□□□ -0.68
CPNE1-218ENST00000439806 LRRN4Q8WUT4 740 aa10.8□□□□□ -0.68
CPNE1-218ENST00000439806 SLC44A1Q8WWI5 657 aa10.8□□□□□ -0.68
CPNE1-218ENST00000439806 NDRG1Q92597 394 aaKnown RBP10.8□□□□□ -0.68
CPNE1-218ENST00000439806 WNT8BQ93098 351 aa10.8□□□□□ -0.68
CPNE1-218ENST00000439806 ZFP42Q96MM3 310 aa10.8□□□□□ -0.68
CPNE1-218ENST00000439806 NPY6RQ99463 290 aa10.8□□□□□ -0.68
CPNE1-218ENST00000439806 POPDC2Q9HBU9 364 aa10.8□□□□□ -0.68
CPNE1-218ENST00000439806 CHST12Q9NRB3 414 aa10.8□□□□□ -0.68
CPNE1-218ENST00000439806 MTMR10Q9NXD2 777 aa10.8□□□□□ -0.68
CPNE1-218ENST00000439806 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.8□□□□□ -0.68
CPNE1-218ENST00000439806 COX16Q9P0S2 106 aa10.8□□□□□ -0.68
CPNE1-218ENST00000439806 GTF2IRD1Q9UHL9 959 aa10.8□□□□□ -0.68
CPNE1-218ENST00000439806 PHTF1Q9UMS5 762 aa10.8□□□□□ -0.68
CPNE1-218ENST00000439806 ST3GAL5Q9UNP4 418 aa10.8□□□□□ -0.68
CPNE1-218ENST00000439806 TTLL3Q9Y4R7 772 aa10.8□□□□□ -0.68
CPNE1-218ENST00000439806 CFAP73A6NFT4 308 aa10.79□□□□□ -0.68
CPNE1-218ENST00000439806 GOLGA8RI6L899 631 aa10.79□□□□□ -0.68
CPNE1-218ENST00000439806 EEF2KO00418 725 aaKnown RBP10.79□□□□□ -0.68
CPNE1-218ENST00000439806 TRDMT1O14717 391 aaKnown RBP10.79□□□□□ -0.68
CPNE1-218ENST00000439806 GABRDO14764 452 aa10.79□□□□□ -0.68
CPNE1-218ENST00000439806 CAPN9O14815 690 aa10.79□□□□□ -0.68
CPNE1-218ENST00000439806 GPR182O15218 404 aa10.79□□□□□ -0.68
CPNE1-218ENST00000439806 MFSD11O43934 449 aa10.79□□□□□ -0.68
CPNE1-218ENST00000439806 LPXNO60711 386 aa10.79□□□□□ -0.68
CPNE1-218ENST00000439806 ZNF189O75820 626 aaPredicted RBP10.79□□□□□ -0.68
CPNE1-218ENST00000439806 AP1G2O75843 785 aa10.79□□□□□ -0.68
CPNE1-218ENST00000439806 DGKIO75912 1065 aa10.79□□□□□ -0.68
CPNE1-218ENST00000439806 UBOX5O94941 541 aa10.79□□□□□ -0.68
CPNE1-218ENST00000439806 HNRNPH1P31943 449 aaKnown RBP10.79□□□□□ -0.68
CPNE1-218ENST00000439806 MAP3K7CLP57077 242 aa10.79□□□□□ -0.68
CPNE1-218ENST00000439806 INHBEP58166 350 aa10.79□□□□□ -0.68
CPNE1-218ENST00000439806 SLC10A2Q12908 348 aaPredicted RBP10.79□□□□□ -0.68
CPNE1-218ENST00000439806 DNAJC3Q13217 504 aa10.79□□□□□ -0.68
CPNE1-218ENST00000439806 NME3Q13232 169 aa10.79□□□□□ -0.68
CPNE1-218ENST00000439806 PDK1Q15118 436 aa10.79□□□□□ -0.68
CPNE1-218ENST00000439806 NBPF20Q3BBV1 942 aa10.79□□□□□ -0.68
CPNE1-218ENST00000439806 TTC39BQ5VTQ0 682 aaPredicted RBP10.79□□□□□ -0.68
CPNE1-218ENST00000439806 CGB2Q6NT52 195 aa10.79□□□□□ -0.68
CPNE1-218ENST00000439806 CLEC20AQ6ZU45 233 aa10.79□□□□□ -0.68
CPNE1-218ENST00000439806 SLC26A11Q86WA9 606 aa10.79□□□□□ -0.68
CPNE1-218ENST00000439806 METTL23Q86XA0 190 aa10.79□□□□□ -0.68
CPNE1-218ENST00000439806 PYROXD2Q8N2H3 581 aa10.79□□□□□ -0.68
CPNE1-218ENST00000439806 PPM1NQ8N819 430 aa10.79□□□□□ -0.68
CPNE1-218ENST00000439806 TRPV1Q8NER1 839 aa10.79□□□□□ -0.68
CPNE1-218ENST00000439806 RNF139Q8WU17 664 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms